Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13]
177,401 sequences; 1,960,317,893 total letters
Query= NC_017940.1
Length=127732
Score E
Sequences producing significant alignments: (Bits) Value
seq18562 273 2e-68
seq145711 138 9e-28
seq95250 87.8 1e-12
>seq18562
Length=18598
Score = 273 bits (302), Expect = 2e-68
Identities = 445/632 (70%), Gaps = 18/632 (3%)
Strand=Plus/Minus
Query 29767 GGAAAGGGTCTGGGCTCCCTCTCGAGCTG-AGTCTTCAGCGGTTCCACGTGATCCAGGTA 29825
||||||| ||| || || | || ||||| ||| |||||||| || |||| ||||||
Sbjct 12877 GGAAAGG-TCTTGGTTCTCACTGAAGCTGCAGT-TTCAGCGGCTCAGTATGATTCAGGTA 12820
Query 29826 GACGTGAGCGTCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGC 29885
||||| || ||||||| ||||| ||||| || || || | ||| || ||| ||| ||
Sbjct 12819 AACGTGTGCATCTCCCAAAGTGTGTACAAAGTCACCTGGCTTTAGGCCCATGATGTGTGC 12760
Query 29886 CATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTC 29945
||||||| ||||| || |||||||||| |||||| |||||| | || || ||||||||
Sbjct 12759 GATCATGTGGGTGAGCAGGGAGTAGCTGGAGATGTTGAAGGGTGCGCCCAGGCCCATGTC 12700
Query 29946 CCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGT------CG--CTCACGTAAAAC 29997
| ||||||||||| ||||| || || ||||| || | || |||||| |||
Sbjct 12699 TGCTGACCTCTGGTATAGCTGGCAGGACAGCTCCCCATTCATCACGTAGACACGTAGAAC 12640
Query 29998 TGACACATGGTGTGGCACGGAGGAAGAGCCATG--AGGCCCAAG-TCTTTGGGGTTCCAG 30054
|| || | || ||||| ||||| || |||||| ||| ||| ||||| || |||||
Sbjct 12639 TGGCAAAGGGCATGGCATGGAGGTAGGGCCATGAAAGG---AAGATCTTTTGGATTCCAA 12583
Query 30055 GCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTGC 30114
|| |||| ||||| | ||||| || ||| | |||| | ||| | | ||||||
Sbjct 12582 GCACACAGAATGATTCTTCTGTCAGTAGGTTTGGTTTTGATCATGTCAATCACCTTTTGC 12523
Query 30115 AGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAA 30174
|| || |||| || || || || |||| ||| | |||| ||||| || |||
Sbjct 12522 AGTTGGCCCACTCCTTGACCTGAATAATCTGAATCCATATTTTTGTATTCTGCCCCAAAA 12463
Query 30175 TGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCC 30234
||||||||||| || || || || || || | || ||||||| ||| ||| ||
Sbjct 12462 TGCCTCCACTGAAAGCC-TAAACTGGGCCTAAATCCCCCTCTTTTCTGCTAGAGAATCCA 12404
Query 30235 CTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGAG 30294
|||| ||||| | || || ||||| |||||||| || || ||| | ||
Sbjct 12403 AGGCCATCCAGGAAGTCACGAGACCCATTGGCATCCCAGATTTTCACTCCCCTGGTTGAC 12344
Query 30295 AGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTC 30354
|| ||||| | |||||||| || ||| ||||||||||||||||||| | |||||
Sbjct 12343 AGTTCTTTAGCATTTGTGGATCCGTTGATAAACCACAGCAGCTCCTCCAAAATCCCCTTC 12284
Query 30355 CAAAAGACCCTCTTGGTCGTGAGGAGGGGAAA 30386
|| || || | ||||| || || || |||||
Sbjct 12283 CAGAACACACATTTGGTTGTCAGCAGAGGAAA 12252
>seq145711
Length=17273
Score = 138 bits (152), Expect = 9e-28
Identities = 129/164 (79%), Gaps = 0/164 (0%)
Strand=Plus/Plus
Query 29868 TAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGG 29927
||| || |||| ||| || |||||||| ||||| || ||||||||||||||||| |||||
Sbjct 11194 TAGGCCCGTGATGTGTGCGATCATGTAGGTGAGCAGGGAGTAGCTGGCGATGTTGAAGGG 11253
Query 29928 TACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCT 29987
|| || || |||||||| | ||||||||||| ||||| || || ||||| || |
Sbjct 11254 CACGCCCAGGCCCATGTCTGCTGACCTCTGGTATAGCTGGCAGGACAGCTCCCCATTCAC 11313
Query 29988 CACGTAAAACTGACACATGGTGTGGCACGGAGGAAGAGCCATGA 30031
|||||| ||||| || | || ||||| ||||| || |||||||
Sbjct 11314 CACGTAGAACTGGCAGAGGGCATGGCAGGGAGGTAGGGCCATGA 11357
>seq95250
Length=14987
Score = 87.8 bits (96), Expect = 1e-12
Identities = 84/108 (78%), Gaps = 0/108 (0%)
Strand=Plus/Plus
Query 112102 TTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCTCAGAGGTCTATTCTTTTCGGGG 112161
|| || || || ||||| |||| || |||||||| | | ||||| |||||| || ||
Sbjct 14027 TTGAGTTCTCTACTGAGAACTAAATTAATCCTGTCCTTTAAAGGTCGATTCTTCTCAGGA 14086
Query 112162 ATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTGCCT 112209
||||||||||| ||||| ||||||| ||||||| ||||| || |||
Sbjct 14087 ATGGAGAACCAGGTCTTCTTACCCATAATCACCAAATTCTGTTTACCT 14134
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 407734138230173
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |