Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13]
177,401 sequences; 1,960,317,893 total letters
Query= NC_017972.1
Length=280538
Score E
Sequences producing significant alignments: (Bits) Value
seq140315 102 1e-16
>seq140315
Length=18209
Score = 102 bits (112), Expect = 1e-16
Identities = 203/296 (69%), Gaps = 11/296 (4%)
Strand=Plus/Minus
Query 23073 GCCTTTCCATTCTGGTTCCAGCGGCGTGACGTTTACGATGATGCCGCAACGCGCATACGT 23132
||||| ||| || || || ||||| |||||||| |||||||||||||||||||| || ||
Sbjct 18195 GCCTTCCCACTCCGGCTCGAGCGGAGTGACGTTGACGATGATGCCGCAACGCGCGTAGGT 18136
Query 23133 CGATTTGCCGAGGCAGATAACTAATACGTCACGCGGAATGTTGAAGTGTTCCGGCGTGTT 23192
||||| ||||| | || | ||| ||||||||| ||| | ||| ||
Sbjct 18135 GCTCTTGCCCAGGCACACCACGAGGGTGTCGCGCGGAATGCGGAAATACTCCACGGTACG 18076
Query 23193 TGCCAGTGCGAAACTGTTCGGCGGAATGAT-CAGGCCTTGGCCGTTTGGAACGTGCTTCG 23251
||||| ||||| ||||| ||||| ||||| || | | ||| || || || |||
Sbjct 18075 CGCCAGCGCGAAGCTGTTGGGCGGGATGATGCATTCGTCGGCGGT---GA---TG--TCG 18024
Query 23252 TAACGAAATTGTCTTCGGTGAAATTCTTTGGATCGACAACCGCGTTATTCAGGTTGGTGA 23311
||||| || | ||| | ||| || || || | | || | ||||||||
Sbjct 18023 --ACGAAGCTGCCCGAATCGAAGTGCTTCGGGTCCACGATGGTCGAGTTGATGTTGGTGA 17966
Query 23312 AAACCTTGAATTCGTTACCGCAACGAATATCGTAGCCGTAGCTGGAAACACCGTAG 23367
| |||||||| ||| |||||| | ||||| ||||||||||| |||||||
Sbjct 17965 ACACCTTGAACTCGCGCGAGCAACGCACGTCGTAACCGTAGCTGGAGGTACCGTAG 17910
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 895603174972080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |