Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_017972.1 Length=280538 Score E Sequences producing significant alignments: (Bits) Value seq140315 102 1e-16 >seq140315 Length=18209 Score = 102 bits (112), Expect = 1e-16 Identities = 203/296 (69%), Gaps = 11/296 (4%) Strand=Plus/Minus Query 23073 GCCTTTCCATTCTGGTTCCAGCGGCGTGACGTTTACGATGATGCCGCAACGCGCATACGT 23132 ||||| ||| || || || ||||| |||||||| |||||||||||||||||||| || || Sbjct 18195 GCCTTCCCACTCCGGCTCGAGCGGAGTGACGTTGACGATGATGCCGCAACGCGCGTAGGT 18136 Query 23133 CGATTTGCCGAGGCAGATAACTAATACGTCACGCGGAATGTTGAAGTGTTCCGGCGTGTT 23192 ||||| ||||| | || | ||| ||||||||| ||| | ||| || Sbjct 18135 GCTCTTGCCCAGGCACACCACGAGGGTGTCGCGCGGAATGCGGAAATACTCCACGGTACG 18076 Query 23193 TGCCAGTGCGAAACTGTTCGGCGGAATGAT-CAGGCCTTGGCCGTTTGGAACGTGCTTCG 23251 ||||| ||||| ||||| ||||| ||||| || | | ||| || || || ||| Sbjct 18075 CGCCAGCGCGAAGCTGTTGGGCGGGATGATGCATTCGTCGGCGGT---GA---TG--TCG 18024 Query 23252 TAACGAAATTGTCTTCGGTGAAATTCTTTGGATCGACAACCGCGTTATTCAGGTTGGTGA 23311 ||||| || | ||| | ||| || || || | | || | |||||||| Sbjct 18023 --ACGAAGCTGCCCGAATCGAAGTGCTTCGGGTCCACGATGGTCGAGTTGATGTTGGTGA 17966 Query 23312 AAACCTTGAATTCGTTACCGCAACGAATATCGTAGCCGTAGCTGGAAACACCGTAG 23367 | |||||||| ||| |||||| | ||||| ||||||||||| ||||||| Sbjct 17965 ACACCTTGAACTCGCGCGAGCAACGCACGTCGTAACCGTAGCTGGAGGTACCGTAG 17910 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 895603174972080