Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13]
177,401 sequences; 1,960,317,893 total letters
Query= NC_019405.1
Length=215710
Score E
Sequences producing significant alignments: (Bits) Value
seq166368 161 1e-34
seq161357 161 1e-34
>seq166368
Length=2936
Score = 161 bits (178), Expect = 1e-34
Identities = 283/406 (70%), Gaps = 12/406 (3%)
Strand=Plus/Minus
Query 136646 AGCCCTTCACGCAGAGGACTTGCTTGAGGGTGTGGACGATGTCCACGAGGTCCTTCTGGG 136705
|||| || ||||| || || || || |||||||| | |||||| ||||| |||||
Sbjct 682 AGCCTTTGACGCACAGCACCTGGCGCAGTGTGTGGACCACGTCCACCAGGTCGAGCTGGG 623
Query 136706 CCTCCATGACCGCGTCGATGTCCTTGTAGGCCATCGGGATTTCGTCGATCACGCCAGCGT 136765
| |||| || ||||||| |||||| ||| ||| ||| || | |||||| ||
Sbjct 622 CGGCCATCACATCGTCGATCGACTTGTACGCCGCCGGCGATTCATCCAGCACGCCGCTGT 563
Query 136766 CCTTGCGGCACTCCACGCCCTCGGTGGCCTTGATCTGGTCCTCCAGGGTGA--AGGTCGC 136823
|||||||||| ||||| | |||| |||| | || | ||||||||| | ||||
Sbjct 562 CCTTGCGGCATTCCACATGCGCGGTCGCCTCGCGGTGCTGGGCCAGGGTGATCCGCTCGC 503
Query 136824 CTTGGCCTGGGTCCGCG--ACATCGTCCGGCCCGCGCCGTGCGAGCACGAGCAGAACGAG 136881
| ||| | ||||| |||| |||||| |||||||| ||| | ||| |
Sbjct 502 GT--GCC--GTGCCGCGGCTCATCACCCGGCCTGCGCCGTGGCTGCAGCTGTGGAAACTG 447
Query 136882 TCCGCATTGCCCTTGCCGCGCACGATGTAGGACTTGGC--CCCCATCGAGCCGGGGATGA 136939
|| |||||||||||||| |||||||||||| || || ||||| |||||||||||
Sbjct 446 TCTGCATTGCCCTTGCCACGCACGATGTAG--CTGCGCGTGCCCATGCTGCCGGGGATGA 389
Query 136940 TCCCGAACTGGTCCTTCTGCGCCGACACCGCGCCCTTGCGGGTCACGAAGACCCACTCGT 136999
| || | || | ||| | || ||||| ||||||||||| || | | ||
Sbjct 388 TGCCCAGCTCGCCCTGGCGTGCACTGACCGCACCCTTGCGGGTGACCAGCAGTTCCTGCC 329
Query 137000 CGAAGTGGAATTCCTTCTGGACGTAGTTGTGGTGGCAGTTCACCGC 137045
|| ||| ||||||||| |||||||||||||||||||| || ||
Sbjct 328 CGGCGTGCGTTTCCTTCTGCACGTAGTTGTGGTGGCAGTTGACGGC 283
>seq161357
Length=2110
Score = 161 bits (178), Expect = 1e-34
Identities = 230/315 (73%), Gaps = 13/315 (4%)
Strand=Plus/Minus
Query 137082 CCGCATGGCCTCCAGGACCCGGACCATCATCATCTCGCGGTTGATCCGCGCGAAGTCCTG 137141
|||||| | |||| || || |||||||| |||||| ||| ||||||| |||||||
Sbjct 2094 CCGCATCTCGGCCAGCACGCGCGCCATCATCGCCTCGCGATTGTGCCGCGCGTAGTCCTG 2035
Query 137142 GCCCCAGGCGACGGCTTCCACGTAGTCGTGGAACTCCGGCTCGCCTTCGCAGAGCCAAGC 137201
|||||| || |||||||||||||||| |||| |||||||||||| || | ||
Sbjct 2034 CGCCCAGGACACCGCTTCCACGTAGTCGTCGAACAGCGGCTCGCCTTCCATGAAGAAGGC 1975
Query 137202 AAGGTCCTTGTCCAGCGGCTTGCGCCCG-TCACGACGCAGCATCATCTC---CTTGGCCT 137257
||||||||||| || | | | ||| |||| || || || ||| ||||
Sbjct 1974 CAGGTCCTTGTCAGGCAGATGGAAACCGAGCACG-CGGCGCTCCAGCTCGCGACGCGCCT 1916
Query 137258 TCTCGATGAAGATGCG-GCCGATGGTGTTGCCGACGCCGCGCGAGCCCGAGTGGAGCATC 137316
|||||||||| | || |||||| ||| ||| ||| |||||||| ||| |||||
Sbjct 1915 GCTCGATGAAG-TACGTGCCGATCAGGTTCCCGGTGCCACGCGAGCCGCTGTGCAGCATT 1857
Query 137317 ACCCAGACGCGCTGGTCC---TCGTCGAGGCAGACCTCGATGAAGTGGTTGCCGCCGCCC 137373
||||| ||| || ||| || || ||||| | |||||||||||||||||| || |||
Sbjct 1856 ACCCACACG-GC--ATCCGTTTCATCCAGGCACAGCTCGATGAAGTGGTTGCCACCTCCC 1800
Query 137374 AGGGTGCCCAGTTGG 137388
|| |||||||| |||
Sbjct 1799 AGCGTGCCCAGCTGG 1785
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 688613597053200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |