Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_019406.1 Length=279967 Score E Sequences producing significant alignments: (Bits) Value seq166368 150 3e-31 seq161357 109 1e-18 seq176675 91.5 3e-13 >seq166368 Length=2936 Score = 150 bits (166), Expect = 3e-31 Identities = 277/402 (69%), Gaps = 8/402 (2%) Strand=Plus/Minus Query 168273 CCCTTGACGCACAACACCTGCTTGAGGGTGGCGACGATCTCCACCATTTCTTCCTGGGCC 168332 || |||||||||| |||||| || ||| ||| | ||||||| || |||||| Sbjct 680 CCTTTGACGCACAGCACCTGGCGCAGTGTGTGGACCACGTCCACCAGGTCGAGCTGGGCG 621 Query 168333 GCCATGACGAGTTCGATCGGCTTGTAAGCCTTCGGCGTCTCGTCGATCACGCCTTCGTCC 168392 ||||| || ||||||| |||||| ||| ||||| || || | |||||| |||| Sbjct 620 GCCATCACATCGTCGATCGACTTGTACGCCGCCGGCGATTCATCCAGCACGCCGCTGTCC 561 Query 168393 TTGCGGCACTCGACGCCCTTCGTGGCTTCGACGTGCTCGTCCAGGGAGACGAGCTTCTTC 168452 |||||||| || || | || || ||| ||||| | |||||| || ||| Sbjct 560 TTGCGGCATTCCACATGCGCGGTCGCCTCGCGGTGCTGGGCCAGGGTGATCCGCTCGCGT 501 Query 168453 GCC--GCCGAACGCGACATGACGCGGCCGGCGCCGTGGCTGCACGAGCAGAAGGCGTCAG 168510 ||| |||| || ||| || ||||| |||||||||||||| | ||| ||| | Sbjct 500 GCCGTGCCG--CGGCTCATCACCCGGCCTGCGCCGTGGCTGCAGCTGTGGAAACTGTCTG 443 Query 168511 CGTGGCCCTTGCCGCGCACGATGAACGACTTGGC--GCCCATCGAACCCGGAATGATGCC 168568 | | ||||||||| ||||||||| | || || |||||| || || |||||||| Sbjct 442 CATTGCCCTTGCCACGCACGATGTA--GCTGCGCGTGCCCATGCTGCCGGGGATGATGCC 385 Query 168569 GAGTTCGTCCTTCTGCGCCGACACCGCGCCCTTGCGGGTCACGAAGATGTCCTCGCCGAA 168628 || ||| ||| | || ||||| ||||||||||| || | | |||| ||| Sbjct 384 CAGCTCGCCCTGGCGTGCACTGACCGCACCCTTGCGGGTGACCAGCAGTTCCTGCCCGGC 325 Query 168629 GTGGCGTTCCTTGTTGACGTAGTTGTGGTGACAGTTCACCGC 168670 ||| |||||| | |||||||||||||| ||||| || || Sbjct 324 GTGCGTTTCCTTCTGCACGTAGTTGTGGTGGCAGTTGACGGC 283 >seq161357 Length=2110 Score = 109 bits (120), Expect = 1e-18 Identities = 164/229 (72%), Gaps = 8/229 (3%) Strand=Plus/Minus Query 169241 CAGCGTGGTGCGCACAGCCATCATGCCGCAGCCGATGTCGACGCCGACCGCGTACGGGAT 169300 |||||| |||||||| || |||||||||||||||||| ||||| ||||| ||| || Sbjct 1584 CAGCGTCGTGCGCACCGCGGCCATGCCGCAGCCGATGTCCACGCCCACCGCCGCCGGAAT 1525 Query 169301 CACCGCATCCTTGGTCGGGATCACCGAACCAACGGCTGCGCCGTACCCGGCGTGGACGTC 169360 | ||| | ||||||||||||||| || |||| ||||| | || ||| ||||| Sbjct 1524 GATCGCTCCGCGGGTCGGGATCACCGAGCCGACGGTCGCGCCCTTTCCCAGGTGCACGTC 1465 Query 169361 GGGCATCACCGCGAC---GTGCTTGAACACGAACGGCAGCCCGGCGACGTTGTGGGCCTG 169417 |||||||| || || | || | ||||| || | |||||| |||| | ||| Sbjct 1464 CGGCATCACGGCCACCCAGGGCCCG---ACGAATGGAATGGCGGCGATGTTGCGCAGCTG 1408 Query 169418 ATCTTCGGCGCCGCGC-TCGAAAGGCACACCGTCGACCCAAGCCTTGAT 169465 || | ||| | |||| || | ||||| |||| ||||| ||||||| Sbjct 1407 CTCATGGGC-CTGCGCTTCCAGCGGCACGCCGTTCACCCAGCCCTTGAT 1360 >seq176675 Length=12150 Score = 91.5 bits (100), Expect = 3e-13 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 132959 TGATGCGGGGTGGAGCAGTCCGGTAGCTCGTTTGGCTCATAACCAAAAGGTCGAGGGTTC 133018 |||||||||||||||||||| || ||||||| ||||||||||| ||||||| ||||| Sbjct 3325 TGATGCGGGGTGGAGCAGTCTGGCAGCTCGTCGGGCTCATAACCCGAAGGTCGCAGGTTC 3266 Query 133019 AAATCCCTCCCCCGC 133033 |||||| ||||||| Sbjct 3265 AAATCCTGCCCCCGC 3251 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 132962 TGCGGGGTGGAGCAGTCCGGTAGCTCGTTTGGCTCATAACCAAAAGGTCGAGGGTTCAAA 133021 ||||||||||||||||| || ||||||| ||||||||||| ||||||| |||||||| Sbjct 3481 TGCGGGGTGGAGCAGTCTGGCAGCTCGTCGGGCTCATAACCCGAAGGTCGCAGGTTCAAA 3422 Query 133022 TCCCTCCCCCGC 133033 ||| ||||||| Sbjct 3421 TCCTGCCCCCGC 3410 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 893780026810920