Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13]
177,401 sequences; 1,960,317,893 total letters
Query= NC_019406.1
Length=279967
Score E
Sequences producing significant alignments: (Bits) Value
seq166368 150 3e-31
seq161357 109 1e-18
seq176675 91.5 3e-13
>seq166368
Length=2936
Score = 150 bits (166), Expect = 3e-31
Identities = 277/402 (69%), Gaps = 8/402 (2%)
Strand=Plus/Minus
Query 168273 CCCTTGACGCACAACACCTGCTTGAGGGTGGCGACGATCTCCACCATTTCTTCCTGGGCC 168332
|| |||||||||| |||||| || ||| ||| | ||||||| || ||||||
Sbjct 680 CCTTTGACGCACAGCACCTGGCGCAGTGTGTGGACCACGTCCACCAGGTCGAGCTGGGCG 621
Query 168333 GCCATGACGAGTTCGATCGGCTTGTAAGCCTTCGGCGTCTCGTCGATCACGCCTTCGTCC 168392
||||| || ||||||| |||||| ||| ||||| || || | |||||| ||||
Sbjct 620 GCCATCACATCGTCGATCGACTTGTACGCCGCCGGCGATTCATCCAGCACGCCGCTGTCC 561
Query 168393 TTGCGGCACTCGACGCCCTTCGTGGCTTCGACGTGCTCGTCCAGGGAGACGAGCTTCTTC 168452
|||||||| || || | || || ||| ||||| | |||||| || |||
Sbjct 560 TTGCGGCATTCCACATGCGCGGTCGCCTCGCGGTGCTGGGCCAGGGTGATCCGCTCGCGT 501
Query 168453 GCC--GCCGAACGCGACATGACGCGGCCGGCGCCGTGGCTGCACGAGCAGAAGGCGTCAG 168510
||| |||| || ||| || ||||| |||||||||||||| | ||| ||| |
Sbjct 500 GCCGTGCCG--CGGCTCATCACCCGGCCTGCGCCGTGGCTGCAGCTGTGGAAACTGTCTG 443
Query 168511 CGTGGCCCTTGCCGCGCACGATGAACGACTTGGC--GCCCATCGAACCCGGAATGATGCC 168568
| | ||||||||| ||||||||| | || || |||||| || || ||||||||
Sbjct 442 CATTGCCCTTGCCACGCACGATGTA--GCTGCGCGTGCCCATGCTGCCGGGGATGATGCC 385
Query 168569 GAGTTCGTCCTTCTGCGCCGACACCGCGCCCTTGCGGGTCACGAAGATGTCCTCGCCGAA 168628
|| ||| ||| | || ||||| ||||||||||| || | | |||| |||
Sbjct 384 CAGCTCGCCCTGGCGTGCACTGACCGCACCCTTGCGGGTGACCAGCAGTTCCTGCCCGGC 325
Query 168629 GTGGCGTTCCTTGTTGACGTAGTTGTGGTGACAGTTCACCGC 168670
||| |||||| | |||||||||||||| ||||| || ||
Sbjct 324 GTGCGTTTCCTTCTGCACGTAGTTGTGGTGGCAGTTGACGGC 283
>seq161357
Length=2110
Score = 109 bits (120), Expect = 1e-18
Identities = 164/229 (72%), Gaps = 8/229 (3%)
Strand=Plus/Minus
Query 169241 CAGCGTGGTGCGCACAGCCATCATGCCGCAGCCGATGTCGACGCCGACCGCGTACGGGAT 169300
|||||| |||||||| || |||||||||||||||||| ||||| ||||| ||| ||
Sbjct 1584 CAGCGTCGTGCGCACCGCGGCCATGCCGCAGCCGATGTCCACGCCCACCGCCGCCGGAAT 1525
Query 169301 CACCGCATCCTTGGTCGGGATCACCGAACCAACGGCTGCGCCGTACCCGGCGTGGACGTC 169360
| ||| | ||||||||||||||| || |||| ||||| | || ||| |||||
Sbjct 1524 GATCGCTCCGCGGGTCGGGATCACCGAGCCGACGGTCGCGCCCTTTCCCAGGTGCACGTC 1465
Query 169361 GGGCATCACCGCGAC---GTGCTTGAACACGAACGGCAGCCCGGCGACGTTGTGGGCCTG 169417
|||||||| || || | || | ||||| || | |||||| |||| | |||
Sbjct 1464 CGGCATCACGGCCACCCAGGGCCCG---ACGAATGGAATGGCGGCGATGTTGCGCAGCTG 1408
Query 169418 ATCTTCGGCGCCGCGC-TCGAAAGGCACACCGTCGACCCAAGCCTTGAT 169465
|| | ||| | |||| || | ||||| |||| ||||| |||||||
Sbjct 1407 CTCATGGGC-CTGCGCTTCCAGCGGCACGCCGTTCACCCAGCCCTTGAT 1360
>seq176675
Length=12150
Score = 91.5 bits (100), Expect = 3e-13
Identities = 65/75 (87%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 132959 TGATGCGGGGTGGAGCAGTCCGGTAGCTCGTTTGGCTCATAACCAAAAGGTCGAGGGTTC 133018
|||||||||||||||||||| || ||||||| ||||||||||| ||||||| |||||
Sbjct 3325 TGATGCGGGGTGGAGCAGTCTGGCAGCTCGTCGGGCTCATAACCCGAAGGTCGCAGGTTC 3266
Query 133019 AAATCCCTCCCCCGC 133033
|||||| |||||||
Sbjct 3265 AAATCCTGCCCCCGC 3251
Score = 86.0 bits (94), Expect = 1e-11
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 132962 TGCGGGGTGGAGCAGTCCGGTAGCTCGTTTGGCTCATAACCAAAAGGTCGAGGGTTCAAA 133021
||||||||||||||||| || ||||||| ||||||||||| ||||||| ||||||||
Sbjct 3481 TGCGGGGTGGAGCAGTCTGGCAGCTCGTCGGGCTCATAACCCGAAGGTCGCAGGTTCAAA 3422
Query 133022 TCCCTCCCCCGC 133033
||| |||||||
Sbjct 3421 TCCTGCCCCCGC 3410
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 893780026810920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |