Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13]
177,401 sequences; 1,960,317,893 total letters
Query= NC_019408.1
Length=223720
Score E
Sequences producing significant alignments: (Bits) Value
seq161357 293 3e-74
seq166368 89.7 7e-13
>seq161357
Length=2110
Score = 293 bits (324), Expect = 3e-74
Identities = 543/772 (70%), Gaps = 50/772 (6%)
Strand=Plus/Minus
Query 139810 CCGAGGCGCGCATGGCGTCCAGGACCCGGATCATCATCATCTCGCGGTTGATCCGCGCGA 139869
|||| || ||||| || |||| || || ||||||| |||||| ||| |||||||
Sbjct 2100 CCGATGC-CGCATCTCGGCCAGCACGCGCGCCATCATCGCCTCGCGATTGTGCCGCGCGT 2042
Query 139870 AGTCCTGACCCCAGGCGACGGCTTCCACGTAGTCGTAGAATTCCGGCTCGCCTTCCGACA 139929
||||||| |||||| || |||||||||||||||| ||| ||||||||||||| |
Sbjct 2041 AGTCCTGCGCCCAGGACACCGCTTCCACGTAGTCGTCGAACAGCGGCTCGCCTTCCATGA 1982
Query 139930 GCCACGCGAGGTCCTTGTCGAGCGGCTTCTGACCGTCC---CGACGCAGCATCATCTCCT 139986
| || ||||||||||| || | | |||| | || ||| || | || |
Sbjct 1981 AGAAGGCCAGGTCCTTGTCAGGCAGATGGAAACCGAGCACGCGGCGCTCCAGC-TCGCGA 1923
Query 139987 TG-GCCTTCTCGATGAAGATACG-GCCGATGGTGTTGCCGACGCCGCGCGAGCCCGAGTG 140044
| |||| |||||||||| |||| |||||| ||| ||| ||| |||||||| |||
Sbjct 1922 CGCGCCTGCTCGATGAAG-TACGTGCCGATCAGGTTCCCGGTGCCACGCGAGCCGCTGTG 1864
Query 140045 GAGCATCACCCAGACGCGCTGGTCC---TCGTCGAGGCAGACCTCGATGAAGTGGTTGCC 140101
||||| ||||| ||| || ||| || || ||||| | ||||||||||||||||||
Sbjct 1863 CAGCATTACCCACACG-GCA--TCCGTTTCATCCAGGCACAGCTCGATGAAGTGGTTGCC 1807
Query 140102 GCCGCCCAGCGTGCCCAGTTGGACGA-CGCTGTTGGCGTTCTTGAGGGTCTTG---TACT 140157
|| |||||||||||||| ||| ||| || ||| || | | || || | | |
Sbjct 1806 ACCTCCCAGCGTGCCCAGCTGG-CGATCGAGCTTGTCGGT---GCGGATCCGGCGATGCC 1751
Query 140158 TGTCGCAGAGCTTCTCGAACCGGGCTTCCAGGCCCGAGTCGACC---CACTTGCGCATGA 140214
|||| || |||||| | | || ||||||| || | ||| | | || | |||
Sbjct 1750 TGTCCTTGATCTTCTCCAGGCCAGCGGCCAGGCCGGACTGCACCAGCCGCGTGTGGATGC 1691
Query 140215 TCGAGTTCGGGATGCCGCT-ACGCCCGTTCCAGCCGCCCGACGGACCCGGCCCGCCGTGC 140273
| || || |||| ||| | || || ||| |||| |||| ||| | |
Sbjct 1690 T---GTCGGGCATGC-GCTGATGCTCG--CCA-CCGC------GACCGTTGCCGAC---C 1647
Query 140274 GGGACGGCGTGCTCGATCAGCGAGCGCAGCTTGGCG-AGGCTGTCGGGCAGGTCCGAGGC 140332
|||| | | ||||||| |||||||| | || ||| ||||||||||| |||
Sbjct 1646 GGGATGCTGCGCTCGATGCTGTTGCGCAGCT-GCCGCAGGTCATCGGGCAGGTCGTTGGC 1588
Query 140333 CTTCAGCGAGGTGCGCACGGCCATCATGCCGCAGCCGATGTCCACGCCCACGGCCGCCGG 140392
|| ||||| |||||||| || ||||||||||||||||||||||||||| ||||||||
Sbjct 1587 CTGCAGCGTCGTGCGCACCGCGGCCATGCCGCAGCCGATGTCCACGCCCACCGCCGCCGG 1528
Query 140393 GATGATGGCGCCCTTGGTCGGGATCACCGAGCCCACGGTCGAGCCGATGCCCATGTGGAC 140452
||||| || || |||||||||||||||||| ||||||| ||| | |||| ||| ||
Sbjct 1527 AATGATCGCTCCGCGGGTCGGGATCACCGAGCCGACGGTCGCGCCCTTTCCCAGGTGCAC 1468
Query 140453 GTCCGGCATCAGGGCCACATGCGAGTG---GATGAACGGCAGGGCGGCGAGGTTGTGCGC 140509
||||||||||| |||||| | || | || ||| || | |||||||| |||| ||
Sbjct 1467 GTCCGGCATCACGGCCAC---CCAGGGCCCGACGAATGGAATGGCGGCGATGTTGCGCAG 1411
Query 140510 CTGCACCTGGGCGGGCTGCTCGAAGGTCACACCCCGGACCCAGGCCTTGATC 140561
|||| | ||||| || || | | ||| || |||||| ||||||||
Sbjct 1410 CTGCTCATGGGCCTGCGCTTCCAGCGGCACGCCGTTCACCCAGCCCTTGATC 1359
>seq166368
Length=2936
Score = 89.7 bits (98), Expect = 7e-13
Identities = 141/200 (71%), Gaps = 4/200 (2%)
Strand=Plus/Minus
Query 139583 CCGCCCCGCGCCGTGCGAGCACGAGCAGAACGAGTCGGCGTTGCCCTTGCCGCGCACGAT 139642
||| || |||||||| ||| | ||| ||| || ||||||||||| ||||||||
Sbjct 480 CCGGCCTGCGCCGTGGCTGCAGCTGTGGAAACTGTCTGCATTGCCCTTGCCACGCACGAT 421
Query 139643 GTAGGACTTGGCC--CCCATCGAGCCGGGGATGATGCCGAACTGGTCCTTCTGAGCCGAC 139700
|||| || || ||||| ||||||||||||||| | || | ||| | ||
Sbjct 420 GTAG--CTGCGCGTGCCCATGCTGCCGGGGATGATGCCCAGCTCGCCCTGGCGTGCACTG 363
Query 139701 ACCGCGCCCTTGCGGGTCACGAAGACCCACTCGTCGAAGTGGAACTCCTTCTGGACGTAG 139760
||||| ||||||||||| || | | || || ||| |||||||| ||||||
Sbjct 362 ACCGCACCCTTGCGGGTGACCAGCAGTTCCTGCCCGGCGTGCGTTTCCTTCTGCACGTAG 303
Query 139761 TTGTGGTGGCAGTTCACCGC 139780
|||||||||||||| || ||
Sbjct 302 TTGTGGTGGCAGTTGACGGC 283
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 714188757772800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |