Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_019408.1 Length=223720 Score E Sequences producing significant alignments: (Bits) Value seq161357 293 3e-74 seq166368 89.7 7e-13 >seq161357 Length=2110 Score = 293 bits (324), Expect = 3e-74 Identities = 543/772 (70%), Gaps = 50/772 (6%) Strand=Plus/Minus Query 139810 CCGAGGCGCGCATGGCGTCCAGGACCCGGATCATCATCATCTCGCGGTTGATCCGCGCGA 139869 |||| || ||||| || |||| || || ||||||| |||||| ||| ||||||| Sbjct 2100 CCGATGC-CGCATCTCGGCCAGCACGCGCGCCATCATCGCCTCGCGATTGTGCCGCGCGT 2042 Query 139870 AGTCCTGACCCCAGGCGACGGCTTCCACGTAGTCGTAGAATTCCGGCTCGCCTTCCGACA 139929 ||||||| |||||| || |||||||||||||||| ||| ||||||||||||| | Sbjct 2041 AGTCCTGCGCCCAGGACACCGCTTCCACGTAGTCGTCGAACAGCGGCTCGCCTTCCATGA 1982 Query 139930 GCCACGCGAGGTCCTTGTCGAGCGGCTTCTGACCGTCC---CGACGCAGCATCATCTCCT 139986 | || ||||||||||| || | | |||| | || ||| || | || | Sbjct 1981 AGAAGGCCAGGTCCTTGTCAGGCAGATGGAAACCGAGCACGCGGCGCTCCAGC-TCGCGA 1923 Query 139987 TG-GCCTTCTCGATGAAGATACG-GCCGATGGTGTTGCCGACGCCGCGCGAGCCCGAGTG 140044 | |||| |||||||||| |||| |||||| ||| ||| ||| |||||||| ||| Sbjct 1922 CGCGCCTGCTCGATGAAG-TACGTGCCGATCAGGTTCCCGGTGCCACGCGAGCCGCTGTG 1864 Query 140045 GAGCATCACCCAGACGCGCTGGTCC---TCGTCGAGGCAGACCTCGATGAAGTGGTTGCC 140101 ||||| ||||| ||| || ||| || || ||||| | |||||||||||||||||| Sbjct 1863 CAGCATTACCCACACG-GCA--TCCGTTTCATCCAGGCACAGCTCGATGAAGTGGTTGCC 1807 Query 140102 GCCGCCCAGCGTGCCCAGTTGGACGA-CGCTGTTGGCGTTCTTGAGGGTCTTG---TACT 140157 || |||||||||||||| ||| ||| || ||| || | | || || | | | Sbjct 1806 ACCTCCCAGCGTGCCCAGCTGG-CGATCGAGCTTGTCGGT---GCGGATCCGGCGATGCC 1751 Query 140158 TGTCGCAGAGCTTCTCGAACCGGGCTTCCAGGCCCGAGTCGACC---CACTTGCGCATGA 140214 |||| || |||||| | | || ||||||| || | ||| | | || | ||| Sbjct 1750 TGTCCTTGATCTTCTCCAGGCCAGCGGCCAGGCCGGACTGCACCAGCCGCGTGTGGATGC 1691 Query 140215 TCGAGTTCGGGATGCCGCT-ACGCCCGTTCCAGCCGCCCGACGGACCCGGCCCGCCGTGC 140273 | || || |||| ||| | || || ||| |||| |||| ||| | | Sbjct 1690 T---GTCGGGCATGC-GCTGATGCTCG--CCA-CCGC------GACCGTTGCCGAC---C 1647 Query 140274 GGGACGGCGTGCTCGATCAGCGAGCGCAGCTTGGCG-AGGCTGTCGGGCAGGTCCGAGGC 140332 |||| | | ||||||| |||||||| | || ||| ||||||||||| ||| Sbjct 1646 GGGATGCTGCGCTCGATGCTGTTGCGCAGCT-GCCGCAGGTCATCGGGCAGGTCGTTGGC 1588 Query 140333 CTTCAGCGAGGTGCGCACGGCCATCATGCCGCAGCCGATGTCCACGCCCACGGCCGCCGG 140392 || ||||| |||||||| || ||||||||||||||||||||||||||| |||||||| Sbjct 1587 CTGCAGCGTCGTGCGCACCGCGGCCATGCCGCAGCCGATGTCCACGCCCACCGCCGCCGG 1528 Query 140393 GATGATGGCGCCCTTGGTCGGGATCACCGAGCCCACGGTCGAGCCGATGCCCATGTGGAC 140452 ||||| || || |||||||||||||||||| ||||||| ||| | |||| ||| || Sbjct 1527 AATGATCGCTCCGCGGGTCGGGATCACCGAGCCGACGGTCGCGCCCTTTCCCAGGTGCAC 1468 Query 140453 GTCCGGCATCAGGGCCACATGCGAGTG---GATGAACGGCAGGGCGGCGAGGTTGTGCGC 140509 ||||||||||| |||||| | || | || ||| || | |||||||| |||| || Sbjct 1467 GTCCGGCATCACGGCCAC---CCAGGGCCCGACGAATGGAATGGCGGCGATGTTGCGCAG 1411 Query 140510 CTGCACCTGGGCGGGCTGCTCGAAGGTCACACCCCGGACCCAGGCCTTGATC 140561 |||| | ||||| || || | | ||| || |||||| |||||||| Sbjct 1410 CTGCTCATGGGCCTGCGCTTCCAGCGGCACGCCGTTCACCCAGCCCTTGATC 1359 >seq166368 Length=2936 Score = 89.7 bits (98), Expect = 7e-13 Identities = 141/200 (71%), Gaps = 4/200 (2%) Strand=Plus/Minus Query 139583 CCGCCCCGCGCCGTGCGAGCACGAGCAGAACGAGTCGGCGTTGCCCTTGCCGCGCACGAT 139642 ||| || |||||||| ||| | ||| ||| || ||||||||||| |||||||| Sbjct 480 CCGGCCTGCGCCGTGGCTGCAGCTGTGGAAACTGTCTGCATTGCCCTTGCCACGCACGAT 421 Query 139643 GTAGGACTTGGCC--CCCATCGAGCCGGGGATGATGCCGAACTGGTCCTTCTGAGCCGAC 139700 |||| || || ||||| ||||||||||||||| | || | ||| | || Sbjct 420 GTAG--CTGCGCGTGCCCATGCTGCCGGGGATGATGCCCAGCTCGCCCTGGCGTGCACTG 363 Query 139701 ACCGCGCCCTTGCGGGTCACGAAGACCCACTCGTCGAAGTGGAACTCCTTCTGGACGTAG 139760 ||||| ||||||||||| || | | || || ||| |||||||| |||||| Sbjct 362 ACCGCACCCTTGCGGGTGACCAGCAGTTCCTGCCCGGCGTGCGTTTCCTTCTGCACGTAG 303 Query 139761 TTGTGGTGGCAGTTCACCGC 139780 |||||||||||||| || || Sbjct 302 TTGTGGTGGCAGTTGACGGC 283 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 714188757772800