Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13]
177,401 sequences; 1,960,317,893 total letters
Query= NC_019410.1
Length=221828
Score E
Sequences producing significant alignments: (Bits) Value
seq161357 170 3e-37
seq166368 118 2e-21
>seq161357
Length=2110
Score = 170 bits (188), Expect = 3e-37
Identities = 232/315 (74%), Gaps = 13/315 (4%)
Strand=Plus/Minus
Query 137641 CCGCATGGCCTCCAGGACCCGGACCATCATCATCTCGCGGTTGATCCGCGCGAAGTCCTG 137700
|||||| | |||| || || |||||||| |||||| ||| ||||||| |||||||
Sbjct 2094 CCGCATCTCGGCCAGCACGCGCGCCATCATCGCCTCGCGATTGTGCCGCGCGTAGTCCTG 2035
Query 137701 GCCCCAGGCGACGGCTTCCACGTAGTCGTGGAACTCCGGCTCGCCTTCGCAGAGCCAAGC 137760
|||||| || |||||||||||||||| |||| |||||||||||| || | ||
Sbjct 2034 CGCCCAGGACACCGCTTCCACGTAGTCGTCGAACAGCGGCTCGCCTTCCATGAAGAAGGC 1975
Query 137761 AAGGTCCTTGTCCAGCGGCTTGCGCCCG---TCACGGCGCAGCATCATCTCCTTG-GCCT 137816
||||||||||| || | | | ||| | |||||| || | || | | ||||
Sbjct 1974 CAGGTCCTTGTCAGGCAGATGGAAACCGAGCACGCGGCGCTCCAGC-TCGCGACGCGCCT 1916
Query 137817 TCTCGATGAAGATGCG-GCCGATGGTGTTGCCGACGCCGCGCGAGCCCGAGTGGAGCATC 137875
|||||||||| | || |||||| ||| ||| ||| |||||||| ||| |||||
Sbjct 1915 GCTCGATGAAG-TACGTGCCGATCAGGTTCCCGGTGCCACGCGAGCCGCTGTGCAGCATT 1857
Query 137876 ACCCAGACGCGCTGATCC---TCGTCGAGGCAGACCTCGATGAAGTGGTTGCCGCCGCCC 137932
||||| ||| || |||| || || ||||| | |||||||||||||||||| || |||
Sbjct 1856 ACCCACACG-GC--ATCCGTTTCATCCAGGCACAGCTCGATGAAGTGGTTGCCACCTCCC 1800
Query 137933 AGGGTGCCCAGTTGG 137947
|| |||||||| |||
Sbjct 1799 AGCGTGCCCAGCTGG 1785
>seq166368
Length=2936
Score = 118 bits (130), Expect = 2e-21
Identities = 269/406 (66%), Gaps = 12/406 (3%)
Strand=Plus/Minus
Query 137205 AGCCCTTCACGCAGAGGACTTGCTTGAGGGTGTGGACGATGTCCACGAGGTCCTTCTGGG 137264
|||| || ||||| || || || || |||||||| | |||||| ||||| |||||
Sbjct 682 AGCCTTTGACGCACAGCACCTGGCGCAGTGTGTGGACCACGTCCACCAGGTCGAGCTGGG 623
Query 137265 CCTCCATGACCGCGTCGNNNNNNNNNNNNNNNNNNNNNATTTCGTCGATCACGCCGGCGT 137324
| |||| || ||||| ||| || | ||||||| ||
Sbjct 622 CGGCCATCACATCGTCGATCGACTTGTACGCCGCCGGCGATTCATCCAGCACGCCGCTGT 563
Query 137325 CCTTGCGGCACTCCACGCCCTCGGTGGCCTTGATCTGGTCCTCCAGAGTGAA--GGTCGC 137382
|||||||||| ||||| | |||| |||| | || | |||| |||| | ||||
Sbjct 562 CCTTGCGGCATTCCACATGCGCGGTCGCCTCGCGGTGCTGGGCCAGGGTGATCCGCTCGC 503
Query 137383 CTTGGCCTGGGTCCGCGAC--ATCGTCCGGCCCGCGCCGTGCGAGCACGAGCAGAACGAG 137440
| ||| | ||||| | ||| |||||| |||||||| ||| | ||| |
Sbjct 502 GT--GCCGTG--CCGCGGCTCATCACCCGGCCTGCGCCGTGGCTGCAGCTGTGGAAACTG 447
Query 137441 TCCGCATTGCCCTTGCCGCGCACGATGTAGGACTTGGCC--CCCATCGAGCCGGGGATGA 137498
|| |||||||||||||| |||||||||||| || || ||||| |||||||||||
Sbjct 446 TCTGCATTGCCCTTGCCACGCACGATGTAG--CTGCGCGTGCCCATGCTGCCGGGGATGA 389
Query 137499 TCCCGAACTGGTCCTTCTGCGCCGACACCGCGCCCTTGCGGGTCACGAAGACCCACTCGT 137558
| || | || | ||| | || ||||| ||||||||||| || | | ||
Sbjct 388 TGCCCAGCTCGCCCTGGCGTGCACTGACCGCACCCTTGCGGGTGACCAGCAGTTCCTGCC 329
Query 137559 CGAAGTGGAATTCCTTCTGGACGTAGTTGTGGTGGCAGTTCACCGC 137604
|| ||| ||||||||| |||||||||||||||||||| || ||
Sbjct 328 CGGCGTGCGTTTCCTTCTGCACGTAGTTGTGGTGGCAGTTGACGGC 283
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 708147783480480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |