Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_019410.1 Length=221828 Score E Sequences producing significant alignments: (Bits) Value seq161357 170 3e-37 seq166368 118 2e-21 >seq161357 Length=2110 Score = 170 bits (188), Expect = 3e-37 Identities = 232/315 (74%), Gaps = 13/315 (4%) Strand=Plus/Minus Query 137641 CCGCATGGCCTCCAGGACCCGGACCATCATCATCTCGCGGTTGATCCGCGCGAAGTCCTG 137700 |||||| | |||| || || |||||||| |||||| ||| ||||||| ||||||| Sbjct 2094 CCGCATCTCGGCCAGCACGCGCGCCATCATCGCCTCGCGATTGTGCCGCGCGTAGTCCTG 2035 Query 137701 GCCCCAGGCGACGGCTTCCACGTAGTCGTGGAACTCCGGCTCGCCTTCGCAGAGCCAAGC 137760 |||||| || |||||||||||||||| |||| |||||||||||| || | || Sbjct 2034 CGCCCAGGACACCGCTTCCACGTAGTCGTCGAACAGCGGCTCGCCTTCCATGAAGAAGGC 1975 Query 137761 AAGGTCCTTGTCCAGCGGCTTGCGCCCG---TCACGGCGCAGCATCATCTCCTTG-GCCT 137816 ||||||||||| || | | | ||| | |||||| || | || | | |||| Sbjct 1974 CAGGTCCTTGTCAGGCAGATGGAAACCGAGCACGCGGCGCTCCAGC-TCGCGACGCGCCT 1916 Query 137817 TCTCGATGAAGATGCG-GCCGATGGTGTTGCCGACGCCGCGCGAGCCCGAGTGGAGCATC 137875 |||||||||| | || |||||| ||| ||| ||| |||||||| ||| ||||| Sbjct 1915 GCTCGATGAAG-TACGTGCCGATCAGGTTCCCGGTGCCACGCGAGCCGCTGTGCAGCATT 1857 Query 137876 ACCCAGACGCGCTGATCC---TCGTCGAGGCAGACCTCGATGAAGTGGTTGCCGCCGCCC 137932 ||||| ||| || |||| || || ||||| | |||||||||||||||||| || ||| Sbjct 1856 ACCCACACG-GC--ATCCGTTTCATCCAGGCACAGCTCGATGAAGTGGTTGCCACCTCCC 1800 Query 137933 AGGGTGCCCAGTTGG 137947 || |||||||| ||| Sbjct 1799 AGCGTGCCCAGCTGG 1785 >seq166368 Length=2936 Score = 118 bits (130), Expect = 2e-21 Identities = 269/406 (66%), Gaps = 12/406 (3%) Strand=Plus/Minus Query 137205 AGCCCTTCACGCAGAGGACTTGCTTGAGGGTGTGGACGATGTCCACGAGGTCCTTCTGGG 137264 |||| || ||||| || || || || |||||||| | |||||| ||||| ||||| Sbjct 682 AGCCTTTGACGCACAGCACCTGGCGCAGTGTGTGGACCACGTCCACCAGGTCGAGCTGGG 623 Query 137265 CCTCCATGACCGCGTCGNNNNNNNNNNNNNNNNNNNNNATTTCGTCGATCACGCCGGCGT 137324 | |||| || ||||| ||| || | ||||||| || Sbjct 622 CGGCCATCACATCGTCGATCGACTTGTACGCCGCCGGCGATTCATCCAGCACGCCGCTGT 563 Query 137325 CCTTGCGGCACTCCACGCCCTCGGTGGCCTTGATCTGGTCCTCCAGAGTGAA--GGTCGC 137382 |||||||||| ||||| | |||| |||| | || | |||| |||| | |||| Sbjct 562 CCTTGCGGCATTCCACATGCGCGGTCGCCTCGCGGTGCTGGGCCAGGGTGATCCGCTCGC 503 Query 137383 CTTGGCCTGGGTCCGCGAC--ATCGTCCGGCCCGCGCCGTGCGAGCACGAGCAGAACGAG 137440 | ||| | ||||| | ||| |||||| |||||||| ||| | ||| | Sbjct 502 GT--GCCGTG--CCGCGGCTCATCACCCGGCCTGCGCCGTGGCTGCAGCTGTGGAAACTG 447 Query 137441 TCCGCATTGCCCTTGCCGCGCACGATGTAGGACTTGGCC--CCCATCGAGCCGGGGATGA 137498 || |||||||||||||| |||||||||||| || || ||||| ||||||||||| Sbjct 446 TCTGCATTGCCCTTGCCACGCACGATGTAG--CTGCGCGTGCCCATGCTGCCGGGGATGA 389 Query 137499 TCCCGAACTGGTCCTTCTGCGCCGACACCGCGCCCTTGCGGGTCACGAAGACCCACTCGT 137558 | || | || | ||| | || ||||| ||||||||||| || | | || Sbjct 388 TGCCCAGCTCGCCCTGGCGTGCACTGACCGCACCCTTGCGGGTGACCAGCAGTTCCTGCC 329 Query 137559 CGAAGTGGAATTCCTTCTGGACGTAGTTGTGGTGGCAGTTCACCGC 137604 || ||| ||||||||| |||||||||||||||||||| || || Sbjct 328 CGGCGTGCGTTTCCTTCTGCACGTAGTTGTGGTGGCAGTTGACGGC 283 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 708147783480480