Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_019411.1 Length=219216 Score E Sequences producing significant alignments: (Bits) Value seq161357 161 1e-34 seq166368 114 2e-20 >seq161357 Length=2110 Score = 161 bits (178), Expect = 1e-34 Identities = 235/322 (73%), Gaps = 14/322 (4%) Strand=Plus/Minus Query 136398 CCGACGCTCGCATGGCCTCCAGGACCCGGACCATCATCATCTCGCGGTTGATCCGCGCGA 136457 |||| || ||||| | |||| || || |||||||| |||||| ||| ||||||| Sbjct 2100 CCGATGC-CGCATCTCGGCCAGCACGCGCGCCATCATCGCCTCGCGATTGTGCCGCGCGT 2042 Query 136458 AGTCCTGGCCCCAGGCGACGGCTTCCACGTAGTCGTGGAACTCCGGCTCGCCTTCGCAGA 136517 ||||||| |||||| || |||||||||||||||| |||| |||||||||||| || Sbjct 2041 AGTCCTGCGCCCAGGACACCGCTTCCACGTAGTCGTCGAACAGCGGCTCGCCTTCCATGA 1982 Query 136518 GCCAAGCAAGGTCCTTGTCCAGCGGCTTACGCCCG---TCACGGCGCAGCATCATCTCCT 136574 | || ||||||||||| || | | ||| | |||||| || | || | Sbjct 1981 AGAAGGCCAGGTCCTTGTCAGGCAGATGGAAACCGAGCACGCGGCGCTCCAGC-TCGCGA 1923 Query 136575 TG-GCCTTCTCGATGAAGATGCG-GCCGATGGTGTTGCCGACGCCGCGCGAGCCCGAGTG 136632 | |||| |||||||||| | || |||||| ||| ||| ||| |||||||| ||| Sbjct 1922 CGCGCCTGCTCGATGAAG-TACGTGCCGATCAGGTTCCCGGTGCCACGCGAGCCGCTGTG 1864 Query 136633 GAGCATCACCCAGACGCGCTGGTCC---TCGTCGAGGCAGACCTCGATGAAGTGGTTGCC 136689 ||||| ||||| ||| || ||| || || ||||| | |||||||||||||||||| Sbjct 1863 CAGCATTACCCACACG-GC--ATCCGTTTCATCCAGGCACAGCTCGATGAAGTGGTTGCC 1807 Query 136690 GCCGCCCAGGGTGCCCAGTTGG 136711 || ||||| |||||||| ||| Sbjct 1806 ACCTCCCAGCGTGCCCAGCTGG 1785 >seq166368 Length=2936 Score = 114 bits (126), Expect = 2e-20 Identities = 207/297 (70%), Gaps = 12/297 (4%) Strand=Plus/Minus Query 136078 CACGCCGGCGTCCTTGCGGCACTCCACGCCCTCGGTGGCCTTGATCTGGTCCTCCAGGGT 136137 ||||||| |||||||||||| ||||| | |||| |||| | || | ||||||| Sbjct 573 CACGCCGCTGTCCTTGCGGCATTCCACATGCGCGGTCGCCTCGCGGTGCTGGGCCAGGGT 514 Query 136138 GAA--GGTCGCCTTGGCCTGGGTCCGCGAC--ATCGTCCGGCCCGCGCCGTGCGAGCACG 136193 || | |||| | ||| | ||||| | ||| |||||| |||||||| ||| Sbjct 513 GATCCGCTCGCGT--GCCGTG--CCGCGGCTCATCACCCGGCCTGCGCCGTGGCTGCAGC 458 Query 136194 AGCAGAACGAGTCCGCGTTGCCCTTGCCGCGCACGATGTAGGACTTGGCC--CCCATCGA 136251 | ||| ||| || ||||||||||| |||||||||||| || || ||||| Sbjct 457 TGTGGAAACTGTCTGCATTGCCCTTGCCACGCACGATGTAG--CTGCGCGTGCCCATGCT 400 Query 136252 GCCGGGGATGATCCCGAACTGGTCCTTCTGCGCCGACACCGCGCCCTTGCGGGTCACGAA 136311 |||||||||||| || | || | ||| | || ||||| ||||||||||| || | Sbjct 399 GCCGGGGATGATGCCCAGCTCGCCCTGGCGTGCACTGACCGCACCCTTGCGGGTGACCAG 340 Query 136312 GACCCACTCGTCGAAGTGGAATTCCTTCTGGACGTAGTTGTGGTGGCAGTTCACCGC 136368 | || || ||| ||||||||| |||||||||||||||||||| || || Sbjct 339 CAGTTCCTGCCCGGCGTGCGTTTCCTTCTGCACGTAGTTGTGGTGGCAGTTGACGGC 283 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 699807918336960