Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_019488.1 Length=34117 Score E Sequences producing significant alignments: (Bits) Value seq174924 104 5e-18 >seq174924 Length=7573 Score = 104 bits (114), Expect = 5e-18 Identities = 243/363 (67%), Gaps = 3/363 (1%) Strand=Plus/Minus Query 11900 ATCCCCATCATCTGCGGCGGAACGCGGTGTGCTGCCATCATGTCATCGCGGCTCACGTTC 11959 || || | || |||||| || ||| | || |||| |||||||| ||| ||||| | Sbjct 3178 ATACCGAGCAGCTGCGGGTGAT-GCGCAGCGCCGCCAGTATGTCATCACGGGTCACGCGC 3120 Query 11960 TTGATGTTCAAAAACTCATCCTTAGCTGCAACCTCCGAAAGTGGAATGATTTGGATACCG 12019 ||||| ||||||||||| || ||||| || | ||||| | || | ||| Sbjct 3119 TTGATCCCGGTGAACTCATCCTTTGCGGCAACTTCGCTGATAGGAATCAGCTGCAACCCG 3060 Query 12020 TCCTTTTTACCGTTGGGCGAGTACATAAACAGGTTGCGGAAGTTGCCCGGCCCTTTGGCG 12079 ||||| || || |||||||||| || | |||||||||||| ||||| ||||| | | Sbjct 3059 TCCTTGTTGCCATTGGGCGAGTGCACGAGCAGGTTGCGGAAATTGCCTGGCCCACGCGAG 3000 Query 12080 CTTTTCATTGCCTGGCGGATGTTGTTCACGTCCTCCTGGTTCTGC-GCGGCGTCAGTCAT 12138 | || |||| || | | || ||||||| | | || |||| ||| ||||| Sbjct 2999 TCTCGCAGCGCCTCACGCAAGGCGTCCACGTCCATGCCCTCCGGCTGCGG-GTCGGTCAT 2941 Query 12139 GTACATGATGAAGCCTGCGTGGCTACCGTTAATGTAGTACTTCCGGCGGAACAGTGTTGC 12198 ||| |||||| || || || ||| | ||||||| || ||||||| ||||| Sbjct 2940 GTAATGGATGAACCCGGCATGCGAGCCGCTTGAGTAGTACCGGCGACGGAACAACGTTGC 2881 Query 12199 GGACTCATTCAGCAGGGCGGAAGGGATAGCTGACAGATATTCCGGCAGACCGTAAATCTC 12258 || || || ||||| || || | | | | || ||||||||| || || || || Sbjct 2880 CGATTCGTTGAGCAGCGCCGACTGCACCACGGCCAACCATTCCGGCATCCCATAGATTTC 2821 Query 12259 CTG 12261 ||| Sbjct 2820 CTG 2818 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 108823065350198