Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13]
177,401 sequences; 1,960,317,893 total letters
Query= NC_019488.1
Length=34117
Score E
Sequences producing significant alignments: (Bits) Value
seq174924 104 5e-18
>seq174924
Length=7573
Score = 104 bits (114), Expect = 5e-18
Identities = 243/363 (67%), Gaps = 3/363 (1%)
Strand=Plus/Minus
Query 11900 ATCCCCATCATCTGCGGCGGAACGCGGTGTGCTGCCATCATGTCATCGCGGCTCACGTTC 11959
|| || | || |||||| || ||| | || |||| |||||||| ||| ||||| |
Sbjct 3178 ATACCGAGCAGCTGCGGGTGAT-GCGCAGCGCCGCCAGTATGTCATCACGGGTCACGCGC 3120
Query 11960 TTGATGTTCAAAAACTCATCCTTAGCTGCAACCTCCGAAAGTGGAATGATTTGGATACCG 12019
||||| ||||||||||| || ||||| || | ||||| | || | |||
Sbjct 3119 TTGATCCCGGTGAACTCATCCTTTGCGGCAACTTCGCTGATAGGAATCAGCTGCAACCCG 3060
Query 12020 TCCTTTTTACCGTTGGGCGAGTACATAAACAGGTTGCGGAAGTTGCCCGGCCCTTTGGCG 12079
||||| || || |||||||||| || | |||||||||||| ||||| ||||| | |
Sbjct 3059 TCCTTGTTGCCATTGGGCGAGTGCACGAGCAGGTTGCGGAAATTGCCTGGCCCACGCGAG 3000
Query 12080 CTTTTCATTGCCTGGCGGATGTTGTTCACGTCCTCCTGGTTCTGC-GCGGCGTCAGTCAT 12138
| || |||| || | | || ||||||| | | || |||| ||| |||||
Sbjct 2999 TCTCGCAGCGCCTCACGCAAGGCGTCCACGTCCATGCCCTCCGGCTGCGG-GTCGGTCAT 2941
Query 12139 GTACATGATGAAGCCTGCGTGGCTACCGTTAATGTAGTACTTCCGGCGGAACAGTGTTGC 12198
||| |||||| || || || ||| | ||||||| || ||||||| |||||
Sbjct 2940 GTAATGGATGAACCCGGCATGCGAGCCGCTTGAGTAGTACCGGCGACGGAACAACGTTGC 2881
Query 12199 GGACTCATTCAGCAGGGCGGAAGGGATAGCTGACAGATATTCCGGCAGACCGTAAATCTC 12258
|| || || ||||| || || | | | | || ||||||||| || || || ||
Sbjct 2880 CGATTCGTTGAGCAGCGCCGACTGCACCACGGCCAACCATTCCGGCATCCCATAGATTTC 2821
Query 12259 CTG 12261
|||
Sbjct 2820 CTG 2818
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 108823065350198
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |