Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_019544.1 Length=49335 Score E Sequences producing significant alignments: (Bits) Value seq161904 203 1e-47 >seq161904 Length=2185 Score = 203 bits (224), Expect = 1e-47 Identities = 410/606 (68%), Gaps = 2/606 (0%) Strand=Plus/Plus Query 45521 GTGTTCGGCCGTCAGCTGCGCTTTAACTTGCAGGACGGATTCCCGCTCGTGACGACGAAA 45580 ||||||||| | ||| ||||||| || | | || || |||||||| || || || || Sbjct 866 GTGTTCGGCTGGCAGATGCGCTTCGACCTCAACGAAGGTTTCCCGCTGGTCACCACCAAG 925 Query 45581 AAGTTGCATATCCGCTCGATCATTTATGAACTGCTCTGGTTTTTAAAAGGCGATACGAAT 45640 || |||| | || |||||||| | || ||||| ||||| | ||||||||||| || Sbjct 926 AAACTGCACCTGCGTTCGATCATCCACGAGCTGCTGTGGTTCCTGAAAGGCGATACCAAC 985 Query 45641 GTTCGCTATTTGCAGGAGAATGGTGTGACGATTTGGGACGAGTGGGCCGATGAAAACGGC 45700 | |||| || |||| || || ||| |||||||| |||||||| | ||||| Sbjct 986 ATCGGCTACCTGAAGGACAACCAGGTACGGATCTGGGACGAATGGGCCGACGGCAACGGT 1045 Query 45701 GATCTCGGCCCAATCTACGGCGCGCAATGGCGGTCGTGGAAAGGGGCTGACGGGAAAACG 45760 ||||| ||||| | |||||| ||| ||||| ||| | || ||||| | Sbjct 1046 GATCTTGGCCCGGTGTACGGCAAGCAGTGGCGCAGCTGGGCTGCCGCCGACGGCCGTGAG 1105 Query 45761 GTCGACCAAATTGCGGCGG-TCTTTAAGGAAATCAAGCGCAACCCGAACTCGCGGCGGTT 45819 ||||||| | ||| | || | | | || |||| ||||||||| | ||||||||| | Sbjct 1106 ATCGACCAGA-TGCAGTGGCTGGTGGACGAGATCAGGCGCAACCCCGATTCGCGGCGGCT 1164 Query 45820 GCTTGTGAGCGCGTGGAACGTGGCAAAGTTGGGGGAAATGAAGTTGCCCCCATGTCATTA 45879 | | || ||||| |||||||||| || | | | ||| | || || || || | Sbjct 1165 GGTGGTCAGCGCCTGGAACGTGGGCGAGCTCTCGCAGATGGCGCTGATGCCCTGCCACAA 1224 Query 45880 CGCCTTTCAGTTTTACGTCGCGAATGGCCGGTTGTCATGCATGTGGCAACAGCGTTCTGT 45939 | || ||||| ||||| || ||||| || | ||| || | | ||||| | Sbjct 1225 CCTGTTCCAGTTCTACGTGGCCGATGGCAGGCTCAGTTGCCAGTTGTACCAGCGCAGCGG 1284 Query 45940 CGATACATTTCTAGGATTGCCGTTTAACATCGCTAGCTATGCGCTGTTGACACATATGGT 45999 ||| | || || || ||||||| |||||||| |||||||||||| |||| |||||||| Sbjct 1285 CGACATCTTCCTCGGCGTGCCGTTCAACATCGCCAGCTATGCGCTGCTGACCCATATGGT 1344 Query 46000 TGCCCAACAATGCGACCTCGATGTCGGCGAACTCATTTTCACCGGCGGCGACGTCCATTT 46059 ||| || || ||| | |||||||| || | ||| ||||||| || | Sbjct 1345 TGCGCAGGCGACCGGCCTGGGCGTCGGCGATTTCGTGCACACGCTGGGCGACGCGCACCT 1404 Query 46060 GTACAAAAATCATCTGGAACAAGCGAAACTGCAGCTGACGCGCGAGCCGCGCCCGCTGCC 46119 ||| || ||| | || || || |||||| ||||| |||||| ||||||| Sbjct 1405 GTATTCGAACCATTTCGAGCAGGCCCGCGAGCAGCTCTCGCGCTCGCCGCGAGCGCTGCC 1464 Query 46120 GAAGCT 46125 |||||| Sbjct 1465 GAAGCT 1470 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 157418077190314