Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_019917.1 Length=62952 Score E Sequences producing significant alignments: (Bits) Value seq177183 127 8e-25 >seq177183 Length=17048 Score = 127 bits (140), Expect = 8e-25 Identities = 226/326 (69%), Gaps = 23/326 (7%) Strand=Plus/Minus Query 9706 TCAACAAAGTCATCCTCGTCGGCAATCTCGGTGCCGACCCGGAAACCCGCTATCTCCCGA 9765 |||| ||||||||||| |||||||||||||| ||||||||| || || || Sbjct 12492 TCAATAAAGTCATCCTGGTCGGCAATCTCGGCAACGACCCGGACGTGAAGTACACCCAGA 12433 Query 9766 GCGGCGACGCAATCTCCAACATCCGCCTCGCGACGACCGATCGTTA-CAAGGACAAAGCC 9824 ||||| || ||| || |||| |||| || || ||| | ||| ||||||||| | Sbjct 12432 GCGGCATGGCGATCACCCGCATCAGCCTGGCCACCACC-AGCGTCCGCAAGGACAAGGAT 12374 Query 9825 AGCGGCGACTTCAAAGAAGTGACCGAGTGGCACCGCGTCGCCTTCTTCGGCCGCCTCGCC 9884 ||| || | ||| ||||| ||||||||||| | ||||||||| |||| Sbjct 12373 ---GGCAACCAGCAGGAACGCACCGAATGGCACCGCGTGGTGTTCTTCGGCAAGCTCGGT 12317 Query 9885 GAGATCGTCGACGAGCACCTGCGCAAGGGCGCATCGGTCTACATCGAGGGGCGCATCAAA 9944 ||||||| || |||| |||||||||||||| ||||||||| |||| || || | Sbjct 12316 GAGATCGCCGGCGAGTACCTGCGCAAGGGCAGCTCGGTCTACGTCGAAGGCAGCCT---- 12261 Query 9945 ACGCGGAAGTGGCAGGATCAATCCGGCCAGGATCGC---------TACACGACCGAGATC 9995 ||| | | || | || |||||||||| || ||| | ||||| ||| Sbjct 12260 --GCGTTA-CGACAAGTACA--CCGGCCAGGACGGCGTGGAGAAGTACTCCACCGATATC 12206 Query 9996 GTCGCCGACAAGATGCAGATGCTCGG 10021 |||||||| ||||||||||||| || Sbjct 12205 GTCGCCGATGAGATGCAGATGCTGGG 12180 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 200886327664593