Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_020205.1 Length=42963 Score E Sequences producing significant alignments: (Bits) Value seq177183 161 3e-35 >seq177183 Length=17048 Score = 161 bits (178), Expect = 3e-35 Identities = 222/309 (72%), Gaps = 11/309 (4%) Strand=Plus/Plus Query 34834 GCGGGCGTCCAGCATCTTCATCTGATCGCAGGCGATGTCGGTGGTGTAGTGCGTCACGCC 34893 |||| || ||||||||| ||||| |||| | |||| ||||||| ||| | | |||||| Sbjct 12173 GCGGCCGCCCAGCATCTGCATCTCATCGGCGACGATATCGGTGGAGTACTTCTCCACGCC 12232 Query 34894 TTCCTTTTCG---TACTTGCCGTAACGGATCATGCCCGCCACCGCGATCTTCGAACCCTT 34950 |||| || |||||| ||||||| | |||| | || || | ||||| Sbjct 12233 GTCCTGGCCGGTGTACTTGTCGTAACGCAGGCTGCCTTCGACGTAGACCGAGCTGCCCTT 12292 Query 34951 GCGCAAGTATTCGCCGGCAATCTCGGCCAGCTTCCCGAAGAACACCACCCGGTGCCACTG 35010 ||||| ||| |||||||| ||||| | ||||| |||||||||||||| |||||||| | Sbjct 12293 GCGCAGGTACTCGCCGGCGATCTCACCGAGCTTGCCGAAGAACACCACGCGGTGCCATTC 12352 Query 35011 GGTTTCTTCGACCTGGTTGCCCTCGCGGTCTTTCCGCTTCGAC----GTGGTGGCGATGG 35066 ||| ||| ||||||||| || ||| || || ||| |||||||| | | Sbjct 12353 GGTGCGTTCCTGCTGGTTGCCATCCTTGTCCTTGCG----GACGCTGGTGGTGGCCAGGC 12408 Query 35067 AAATGCGGGTGATGGCCATGCCGCCCTGCGTGTAAGTCACCTTCGGGTCATCCCCCAGGT 35126 ||||||||||| |||||||||| ||| ||||| |||| | |||||| | || || | Sbjct 12409 TGATGCGGGTGATCGCCATGCCGCTCTGGGTGTACTTCACGTCCGGGTCGTTGCCGAGAT 12468 Query 35127 TCCCGATCA 35135 | |||| || Sbjct 12469 TGCCGACCA 12477 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 137070632358850