Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13]
177,401 sequences; 1,960,317,893 total letters
Query= NC_020205.1
Length=42963
Score E
Sequences producing significant alignments: (Bits) Value
seq177183 161 3e-35
>seq177183
Length=17048
Score = 161 bits (178), Expect = 3e-35
Identities = 222/309 (72%), Gaps = 11/309 (4%)
Strand=Plus/Plus
Query 34834 GCGGGCGTCCAGCATCTTCATCTGATCGCAGGCGATGTCGGTGGTGTAGTGCGTCACGCC 34893
|||| || ||||||||| ||||| |||| | |||| ||||||| ||| | | ||||||
Sbjct 12173 GCGGCCGCCCAGCATCTGCATCTCATCGGCGACGATATCGGTGGAGTACTTCTCCACGCC 12232
Query 34894 TTCCTTTTCG---TACTTGCCGTAACGGATCATGCCCGCCACCGCGATCTTCGAACCCTT 34950
|||| || |||||| ||||||| | |||| | || || | |||||
Sbjct 12233 GTCCTGGCCGGTGTACTTGTCGTAACGCAGGCTGCCTTCGACGTAGACCGAGCTGCCCTT 12292
Query 34951 GCGCAAGTATTCGCCGGCAATCTCGGCCAGCTTCCCGAAGAACACCACCCGGTGCCACTG 35010
||||| ||| |||||||| ||||| | ||||| |||||||||||||| |||||||| |
Sbjct 12293 GCGCAGGTACTCGCCGGCGATCTCACCGAGCTTGCCGAAGAACACCACGCGGTGCCATTC 12352
Query 35011 GGTTTCTTCGACCTGGTTGCCCTCGCGGTCTTTCCGCTTCGAC----GTGGTGGCGATGG 35066
||| ||| ||||||||| || ||| || || ||| |||||||| | |
Sbjct 12353 GGTGCGTTCCTGCTGGTTGCCATCCTTGTCCTTGCG----GACGCTGGTGGTGGCCAGGC 12408
Query 35067 AAATGCGGGTGATGGCCATGCCGCCCTGCGTGTAAGTCACCTTCGGGTCATCCCCCAGGT 35126
||||||||||| |||||||||| ||| ||||| |||| | |||||| | || || |
Sbjct 12409 TGATGCGGGTGATCGCCATGCCGCTCTGGGTGTACTTCACGTCCGGGTCGTTGCCGAGAT 12468
Query 35127 TCCCGATCA 35135
| |||| ||
Sbjct 12469 TGCCGACCA 12477
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 137070632358850
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |