Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13]
177,401 sequences; 1,960,317,893 total letters
Query= NC_020474.2
Length=180421
Score E
Sequences producing significant alignments: (Bits) Value
seq113390 298 6e-76
seq41520 150 2e-31
seq119856 82.4 9e-11
>seq113390
Length=24774
Score = 298 bits (330), Expect = 6e-76
Identities = 658/983 (67%), Gaps = 9/983 (1%)
Strand=Plus/Minus
Query 160053 AGATGTTCGTCCAGACATTGGACGGCGAACACGTCAACGTCTTCGTCGAATTTATTTGCG 160112
|||||||| || | ||| |||| ||| || | ||||| ||| |||| || ||||| ||
Sbjct 8022 AGATGTTCATCTAAACACTGGATGGCAAAGAAGTCAATGTCCACGTCAAACTTATTGGCA 7963
Query 160113 AACAGATGGTGAGCGTTCTGTAGGATCCAGTGCACGTCTCCGGACCCGAACACGCAGACG 160172
|| | ||||| ||| | || ||||||| || ||| || | ||||| || || |||
Sbjct 7962 AATAAGTGGTG---GTTGCGCAGTATCCAGTTCAAGTCACCTGCTCCGAAAACACACACG 7906
Query 160173 GAACGTATGTGCACGCCGTTGCAAGGCGGGTACAGAGCTCCTTTCGCCACGTCACCTTCG 160232
|| || | || || ||| |||| || || || | || || || | | |||||||||
Sbjct 7905 GAGCGCACATGGACACCGCTGCAGGGTGGATAGGGGGCCCCCTTGGAAATGTCACCTTCA 7846
Query 160233 TAGTACTGCCACTTCACAAACCTGGCTATCGCCTGCATGTCGGAGGTGTCGTATTTGTAC 160292
||||||||||||| |||||||| || || ||||||||||| || |||| || ||||
Sbjct 7845 AAGTACTGCCACTTGACAAACCTAGCAATTGCCTGCATGTCAGACATGTCATACTTGTGG 7786
Query 160293 ATCAGGGGAACGGCACCGGGAACGCCGGGCATACGCTGTAGGGTGGCCCACAGGTGTTCG 160352
| | || | | || ||||| | || || | ||| | |||||||| || | |||
Sbjct 7785 CTTAAGGACAATGAGCCTGGAACTTCAGGGATCCTCTGAATAGTGGCCCAGAGATACTCG 7726
Query 160353 TCGGGGCTGTACGTGTCCTTAGACCATTCCATGAACTCTCCGATTAACCTGTCCCGCAGA 160412
|| |||||||| ||||| || | ||| ||||| |||| |||| | | |||
Sbjct 7725 TCCGGGCTGTATGTGTCTTTTGCCCACTCCATAAACTTCTGGATTTTTTCATTCTCTAGA 7666
Query 160413 ACGTGAGTAACGTAGGATCTGGTCACGACAAAGTACGCGCTGCCGGAGAATATCGGTATG 160472
|| | || || || | || ||||| || || ||||| || || | ||| |
Sbjct 7665 ACATACTCCACATACTTCCTACTGACCACAAAATAGGCACTGCCTGAAAACAGAGGTGTT 7606
Query 160473 GGTATAGGCGGCGTGTCTTTGTCCTGACCGGTGTTAGACACCACTCCTTTCACCAGCGCG 160532
| ||| || | |||||| || || || | | ||| | | | ||
Sbjct 7605 TCAAGAGGAGGGGGCATTTTGTCAGTCCCCGTATTTGTGAGTTTTCCATCAAAGATTGCA 7546
Query 160533 TGTCGCTTCTTCCACCTGACCATCTTGTGCGGTGGCATGCGTTCCGTCTCTAGACTGTTG 160592
| | || |||||||| | | || || | |||||| || || || || ||||
Sbjct 7545 TAATGTTTTTTCCACCTTTCTTTTTTATGGGATGGCATTTTCTCTGTTTCCAGGTTGTTT 7486
Query 160593 GCACCGTCGAGCGATTTCAGCTGCTTGACGATCTCTAGGTTCGTCTTGAGCGGAAAGTCG 160652
| || | ||| || || | | |||| || || ||||| || || | ||||| ||
Sbjct 7485 TCTCCCATTAACGACTTGAGTTTCCTGACAATTTCCAGGTTGGTTTTAATAGGAAAATCC 7426
Query 160653 GTACCGCACAAGTTTATCACGTACTTCCATTTCGCGCTCAGGTCGTGCAGGTCCCTCATG 160712
|||| || | ||||||| ||||||||| | || ||| || |||||| |||
Sbjct 7425 ATACCACAGAGATTTATCAAGTACTTCCAATCTGCATTCATTCTGTAGAGGTCCTGCATA 7366
Query 160713 CAATTAATATCTGCCTGCACGCGGCTCCAGGAAGCGTACACTACGTTCTCTAGTTTACTG 160772
|| || | || ||||| || || ||||| || || ||||| || |||| || | ||||
Sbjct 7365 CAGTTGAGGTCGGCCTGAACCCGACTCCATGATGCATACACCACAGTCTCCAGCTGACTG 7306
Query 160773 GCCACAAAGACGTTATCGAAACACGACACGATTCC---CACCACCGCCAGAAAGAACATC 160829
||||||||||| ||| |||||| || | || || ||| ||||||||||| | |||
Sbjct 7305 GCCACAAAGACATTACTGAAACAGGATGCAATACCAGTCACTGCCGCCAGAAAGGA-ATC 7247
Query 160830 TTATCCGCCTTTCGGTCCACGTGCACGCAATACAGGTTCTGAGGCGCGTAGATGGCCCTG 160889
|||| |||| |||||| || | ||| || | ||||||||| |||||||||||
Sbjct 7246 --CTCCGATTTTCTGTCCACATGAATGCAGTAGAAATTCTGAGGCATATAGATGGCCCTC 7189
Query 160890 AGCAACCTCTCGAACATCTCTATCTTATGATGGATCACGATAGAGTAGGCTATCGGAAAC 160949
|| | ||| || | ||| || || || ||||| | ||| || || || ||||| ||||||
Sbjct 7188 AGGAGCCTGTCAAGCATTTCAATTTTGTGATGAACCACTATGGAATATGCTATTGGAAAC 7129
Query 160950 TCGGTCTCCTCGCGACTCAGGGACCCGGTCAGGTACTTTCGCGTCTTGATAAAATAATCA 161009
|| | || || ||| || | | | || || ||| ||||||| || || |
Sbjct 7128 TCTGCTTCTTCTTTACTAAGAGGTTCTACAATATATTTGCGCCTCTTGATGAAGGAAGTA 7069
Query 161010 CAATCCCGCGTCATGTTGATATA 161032
||||||| |||||||| |||||
Sbjct 7068 CAATCCCTAGTCATGTTTATATA 7046
>seq41520
Length=21859
Score = 150 bits (166), Expect = 2e-31
Identities = 176/238 (74%), Gaps = 0/238 (0%)
Strand=Plus/Plus
Query 168153 AGAGTCAAGCACGTTTTTCCAGAAATCTTGCCTGATCCGAACGTGTTGAAGAGGCACATG 168212
||||| | ||| | | |||| | ||||| || | ||||| || || ||||||||| ||
Sbjct 20341 AGAGTGAGGCAGGCTATTCCTGCGATCTTCCCGGCACCGAAAGTATTAAAGAGGCACTTG 20400
Query 168213 AAGCAGCCTTCGTCCTCCACGGTGGTATTCCAAAATGTTAGCGTTGAGTTTCGGAGGCCC 168272
| || ||||| ||||||| ||||||||||| || || | |||||||| || || |||
Sbjct 20401 TAACACCCTTCATCCTCCAGAGTGGTATTCCAGAAGGTAATGGTTGAGTTCCGAAGTCCC 20460
Query 168273 AACTGCGTTATGTTCACACGATCTTTATAAGGAGGTTGAACTACAACGCCGTGGTTCTCG 168332
| || |||||||||| || |||||| |||| || || ||||| || || | | |
Sbjct 20461 AGCTCAGTTATGTTCATCTTATTCTTATAACGAGGCTGGACCACAACCCCATGTTCATTG 20520
Query 168333 CTGAAGGTGGCCATGTTCTCCGGGCTGGTGGCCTTTATCTTCTGCCAGGTTACTATCA 168390
|||||||| ||||||| || ||| | |||||| || |||||||| || || ||||
Sbjct 20521 CTGAAGGTAACCATGTTTTCTGGGGTTACGGCCTTGATTTTCTGCCATGTCACAATCA 20578
Score = 102 bits (112), Expect = 9e-17
Identities = 146/205 (71%), Gaps = 3/205 (1%)
Strand=Plus/Plus
Query 167898 GTTACAGTTCCCAAATGTAGTACCTTGCATATCACCTCTCCGTTTCCTACTTGACTCTTT 167957
|| ||| | |||| || || |||| ||| |||||||| || || |||||||||||
Sbjct 17731 GTCACATTCCCCAGGTGCAGCACCTGGCAGATCACCTCC---TTCCCCACTTGACTCTTG 17787
Query 167958 GGATCTTTTACTTGTAAAATGCTAGTTACACTTGTAGTTCCATTGCGATGTAAAACGGTT 168017
|||||||| || || | | || | ||| ||| || |||||| | ||| | | |
Sbjct 17788 GGATCTTTGACCTGGAGGACACTGATGACAGATGTGGTCCCATTGGGGTGTGAGATAATC 17847
Query 168018 TTCGTGCTGTTCTCAATCCCTGATCCTGCCACCTTCCAGAATATTACAGGAGCGGGTCGT 168077
| || |||||||| || ||||| || | ||||||||| | || ||||| || || ||
Sbjct 17848 TCAGTACTGTTCTCCATTCCTGACCCAGGGACCTTCCAGGAGATCACAGGGGCTGGGCGG 17907
Query 168078 GCTGTAGCAGAGCAGGTAATATTTA 168102
|| | |||||||| || |||||||
Sbjct 17908 GCATTGGCAGAGCAAGTGATATTTA 17932
>seq119856
Length=44244
Score = 82.4 bits (90), Expect = 9e-11
Identities = 137/196 (70%), Gaps = 4/196 (2%)
Strand=Plus/Plus
Query 176232 AGATATTTTACTAGGTCACGTGGCGAGTCATAATCATTAACATGTATAAATGCGTGTGGT 176291
||||| ||| ||| |||| || |||| | |||| | ||||| || |||| | || |
Sbjct 15718 AGATACTTTGCTAACTCACTGGGAGAGTTAAAATCTTCCACATGAATGAATGAATCTGCT 15777
Query 176292 GGAATGTAGTTTTCATAATTTTGTCTGGAGGGTCCTAAAACTATTGGTACGGTACGTGCT 176351
||||| || |||||||| |||| || | || || | ||| | ||||| | | ||
Sbjct 15778 GGAATATAATTTTCATAGTTTTCCCTAGGTGGCCCCAGAACAACAGGTACAGAGCCAGCC 15837
Query 176352 AATAATGAGCG--GTAGATCTTTTCTGAGATGTAGTCAGTGTGAATTGAGTTTTCAAAAG 176409
| | |||| ||||| |||||||| ||||| || |||| ||||||||||| || |
Sbjct 15838 AGAA--GAGCATTGTAGAGCTTTTCTGTTATGTAATCTTTGTGGATTGAGTTTTCGAAGG 15895
Query 176410 CTAAATAGAACTTACA 176425
| ||| || |||||
Sbjct 15896 AAAGATAAAATTTACA 15911
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 575939209208760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |