Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_020474.2 Length=180421 Score E Sequences producing significant alignments: (Bits) Value seq113390 298 6e-76 seq41520 150 2e-31 seq119856 82.4 9e-11 >seq113390 Length=24774 Score = 298 bits (330), Expect = 6e-76 Identities = 658/983 (67%), Gaps = 9/983 (1%) Strand=Plus/Minus Query 160053 AGATGTTCGTCCAGACATTGGACGGCGAACACGTCAACGTCTTCGTCGAATTTATTTGCG 160112 |||||||| || | ||| |||| ||| || | ||||| ||| |||| || ||||| || Sbjct 8022 AGATGTTCATCTAAACACTGGATGGCAAAGAAGTCAATGTCCACGTCAAACTTATTGGCA 7963 Query 160113 AACAGATGGTGAGCGTTCTGTAGGATCCAGTGCACGTCTCCGGACCCGAACACGCAGACG 160172 || | ||||| ||| | || ||||||| || ||| || | ||||| || || ||| Sbjct 7962 AATAAGTGGTG---GTTGCGCAGTATCCAGTTCAAGTCACCTGCTCCGAAAACACACACG 7906 Query 160173 GAACGTATGTGCACGCCGTTGCAAGGCGGGTACAGAGCTCCTTTCGCCACGTCACCTTCG 160232 || || | || || ||| |||| || || || | || || || | | ||||||||| Sbjct 7905 GAGCGCACATGGACACCGCTGCAGGGTGGATAGGGGGCCCCCTTGGAAATGTCACCTTCA 7846 Query 160233 TAGTACTGCCACTTCACAAACCTGGCTATCGCCTGCATGTCGGAGGTGTCGTATTTGTAC 160292 ||||||||||||| |||||||| || || ||||||||||| || |||| || |||| Sbjct 7845 AAGTACTGCCACTTGACAAACCTAGCAATTGCCTGCATGTCAGACATGTCATACTTGTGG 7786 Query 160293 ATCAGGGGAACGGCACCGGGAACGCCGGGCATACGCTGTAGGGTGGCCCACAGGTGTTCG 160352 | | || | | || ||||| | || || | ||| | |||||||| || | ||| Sbjct 7785 CTTAAGGACAATGAGCCTGGAACTTCAGGGATCCTCTGAATAGTGGCCCAGAGATACTCG 7726 Query 160353 TCGGGGCTGTACGTGTCCTTAGACCATTCCATGAACTCTCCGATTAACCTGTCCCGCAGA 160412 || |||||||| ||||| || | ||| ||||| |||| |||| | | ||| Sbjct 7725 TCCGGGCTGTATGTGTCTTTTGCCCACTCCATAAACTTCTGGATTTTTTCATTCTCTAGA 7666 Query 160413 ACGTGAGTAACGTAGGATCTGGTCACGACAAAGTACGCGCTGCCGGAGAATATCGGTATG 160472 || | || || || | || ||||| || || ||||| || || | ||| | Sbjct 7665 ACATACTCCACATACTTCCTACTGACCACAAAATAGGCACTGCCTGAAAACAGAGGTGTT 7606 Query 160473 GGTATAGGCGGCGTGTCTTTGTCCTGACCGGTGTTAGACACCACTCCTTTCACCAGCGCG 160532 | ||| || | |||||| || || || | | ||| | | | || Sbjct 7605 TCAAGAGGAGGGGGCATTTTGTCAGTCCCCGTATTTGTGAGTTTTCCATCAAAGATTGCA 7546 Query 160533 TGTCGCTTCTTCCACCTGACCATCTTGTGCGGTGGCATGCGTTCCGTCTCTAGACTGTTG 160592 | | || |||||||| | | || || | |||||| || || || || |||| Sbjct 7545 TAATGTTTTTTCCACCTTTCTTTTTTATGGGATGGCATTTTCTCTGTTTCCAGGTTGTTT 7486 Query 160593 GCACCGTCGAGCGATTTCAGCTGCTTGACGATCTCTAGGTTCGTCTTGAGCGGAAAGTCG 160652 | || | ||| || || | | |||| || || ||||| || || | ||||| || Sbjct 7485 TCTCCCATTAACGACTTGAGTTTCCTGACAATTTCCAGGTTGGTTTTAATAGGAAAATCC 7426 Query 160653 GTACCGCACAAGTTTATCACGTACTTCCATTTCGCGCTCAGGTCGTGCAGGTCCCTCATG 160712 |||| || | ||||||| ||||||||| | || ||| || |||||| ||| Sbjct 7425 ATACCACAGAGATTTATCAAGTACTTCCAATCTGCATTCATTCTGTAGAGGTCCTGCATA 7366 Query 160713 CAATTAATATCTGCCTGCACGCGGCTCCAGGAAGCGTACACTACGTTCTCTAGTTTACTG 160772 || || | || ||||| || || ||||| || || ||||| || |||| || | |||| Sbjct 7365 CAGTTGAGGTCGGCCTGAACCCGACTCCATGATGCATACACCACAGTCTCCAGCTGACTG 7306 Query 160773 GCCACAAAGACGTTATCGAAACACGACACGATTCC---CACCACCGCCAGAAAGAACATC 160829 ||||||||||| ||| |||||| || | || || ||| ||||||||||| | ||| Sbjct 7305 GCCACAAAGACATTACTGAAACAGGATGCAATACCAGTCACTGCCGCCAGAAAGGA-ATC 7247 Query 160830 TTATCCGCCTTTCGGTCCACGTGCACGCAATACAGGTTCTGAGGCGCGTAGATGGCCCTG 160889 |||| |||| |||||| || | ||| || | ||||||||| ||||||||||| Sbjct 7246 --CTCCGATTTTCTGTCCACATGAATGCAGTAGAAATTCTGAGGCATATAGATGGCCCTC 7189 Query 160890 AGCAACCTCTCGAACATCTCTATCTTATGATGGATCACGATAGAGTAGGCTATCGGAAAC 160949 || | ||| || | ||| || || || ||||| | ||| || || || ||||| |||||| Sbjct 7188 AGGAGCCTGTCAAGCATTTCAATTTTGTGATGAACCACTATGGAATATGCTATTGGAAAC 7129 Query 160950 TCGGTCTCCTCGCGACTCAGGGACCCGGTCAGGTACTTTCGCGTCTTGATAAAATAATCA 161009 || | || || ||| || | | | || || ||| ||||||| || || | Sbjct 7128 TCTGCTTCTTCTTTACTAAGAGGTTCTACAATATATTTGCGCCTCTTGATGAAGGAAGTA 7069 Query 161010 CAATCCCGCGTCATGTTGATATA 161032 ||||||| |||||||| ||||| Sbjct 7068 CAATCCCTAGTCATGTTTATATA 7046 >seq41520 Length=21859 Score = 150 bits (166), Expect = 2e-31 Identities = 176/238 (74%), Gaps = 0/238 (0%) Strand=Plus/Plus Query 168153 AGAGTCAAGCACGTTTTTCCAGAAATCTTGCCTGATCCGAACGTGTTGAAGAGGCACATG 168212 ||||| | ||| | | |||| | ||||| || | ||||| || || ||||||||| || Sbjct 20341 AGAGTGAGGCAGGCTATTCCTGCGATCTTCCCGGCACCGAAAGTATTAAAGAGGCACTTG 20400 Query 168213 AAGCAGCCTTCGTCCTCCACGGTGGTATTCCAAAATGTTAGCGTTGAGTTTCGGAGGCCC 168272 | || ||||| ||||||| ||||||||||| || || | |||||||| || || ||| Sbjct 20401 TAACACCCTTCATCCTCCAGAGTGGTATTCCAGAAGGTAATGGTTGAGTTCCGAAGTCCC 20460 Query 168273 AACTGCGTTATGTTCACACGATCTTTATAAGGAGGTTGAACTACAACGCCGTGGTTCTCG 168332 | || |||||||||| || |||||| |||| || || ||||| || || | | | Sbjct 20461 AGCTCAGTTATGTTCATCTTATTCTTATAACGAGGCTGGACCACAACCCCATGTTCATTG 20520 Query 168333 CTGAAGGTGGCCATGTTCTCCGGGCTGGTGGCCTTTATCTTCTGCCAGGTTACTATCA 168390 |||||||| ||||||| || ||| | |||||| || |||||||| || || |||| Sbjct 20521 CTGAAGGTAACCATGTTTTCTGGGGTTACGGCCTTGATTTTCTGCCATGTCACAATCA 20578 Score = 102 bits (112), Expect = 9e-17 Identities = 146/205 (71%), Gaps = 3/205 (1%) Strand=Plus/Plus Query 167898 GTTACAGTTCCCAAATGTAGTACCTTGCATATCACCTCTCCGTTTCCTACTTGACTCTTT 167957 || ||| | |||| || || |||| ||| |||||||| || || ||||||||||| Sbjct 17731 GTCACATTCCCCAGGTGCAGCACCTGGCAGATCACCTCC---TTCCCCACTTGACTCTTG 17787 Query 167958 GGATCTTTTACTTGTAAAATGCTAGTTACACTTGTAGTTCCATTGCGATGTAAAACGGTT 168017 |||||||| || || | | || | ||| ||| || |||||| | ||| | | | Sbjct 17788 GGATCTTTGACCTGGAGGACACTGATGACAGATGTGGTCCCATTGGGGTGTGAGATAATC 17847 Query 168018 TTCGTGCTGTTCTCAATCCCTGATCCTGCCACCTTCCAGAATATTACAGGAGCGGGTCGT 168077 | || |||||||| || ||||| || | ||||||||| | || ||||| || || || Sbjct 17848 TCAGTACTGTTCTCCATTCCTGACCCAGGGACCTTCCAGGAGATCACAGGGGCTGGGCGG 17907 Query 168078 GCTGTAGCAGAGCAGGTAATATTTA 168102 || | |||||||| || ||||||| Sbjct 17908 GCATTGGCAGAGCAAGTGATATTTA 17932 >seq119856 Length=44244 Score = 82.4 bits (90), Expect = 9e-11 Identities = 137/196 (70%), Gaps = 4/196 (2%) Strand=Plus/Plus Query 176232 AGATATTTTACTAGGTCACGTGGCGAGTCATAATCATTAACATGTATAAATGCGTGTGGT 176291 ||||| ||| ||| |||| || |||| | |||| | ||||| || |||| | || | Sbjct 15718 AGATACTTTGCTAACTCACTGGGAGAGTTAAAATCTTCCACATGAATGAATGAATCTGCT 15777 Query 176292 GGAATGTAGTTTTCATAATTTTGTCTGGAGGGTCCTAAAACTATTGGTACGGTACGTGCT 176351 ||||| || |||||||| |||| || | || || | ||| | ||||| | | || Sbjct 15778 GGAATATAATTTTCATAGTTTTCCCTAGGTGGCCCCAGAACAACAGGTACAGAGCCAGCC 15837 Query 176352 AATAATGAGCG--GTAGATCTTTTCTGAGATGTAGTCAGTGTGAATTGAGTTTTCAAAAG 176409 | | |||| ||||| |||||||| ||||| || |||| ||||||||||| || | Sbjct 15838 AGAA--GAGCATTGTAGAGCTTTTCTGTTATGTAATCTTTGTGGATTGAGTTTTCGAAGG 15895 Query 176410 CTAAATAGAACTTACA 176425 | ||| || ||||| Sbjct 15896 AAAGATAAAATTTACA 15911 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 575939209208760