Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq128726 125 8e-24 >seq128726 Length=2406 Score = 125 bits (138), Expect = 8e-24 Identities = 320/482 (66%), Gaps = 9/482 (2%) Strand=Plus/Minus Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242 ||| | ||||| || || || ||||| || || || || ||||||||||| ||||| || Sbjct 697 ACAGCGATAGGGCCAACACCGGGACCACCGCCGCCGTGGGGAATACAGAAGGTCTTGTGG 638 Query 138243 AAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCA 138302 | || ||||| || ||||| |||||| ||||| || | ||||| | ||| || Sbjct 637 AGGTTGAGATGGCAGACATCAGCACCAATGTCACCGGGGCTGCAAAGACCGATCTGGGCG 578 Query 138303 TTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACATATC 138362 || | || ||||| || | || || |||| |||| || || || | | ||| | Sbjct 577 TTCATGTTGGCACCGTCCATGTAGACGAGACCGCCATGCTCGTGGACAAGATCACAGACT 518 Query 138363 TGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCATAATACATGAG 138422 || |||| | | || || ||||| ||| || ||||| |||| ||| ||| | Sbjct 517 TGCTTGATCTCAGGCTCGAAGACACCGAAAGTAGAGGGATAGGTAACCATGATAGCAGCA 458 Query 138423 AGTTCAAATGTATTCATGATTGCTTTCTTCTCTAGATCTTTGATGTCTATGTTGCCA--- 138479 || ||| | | | ||| || || ||||| | ||| || | ||| ||| Sbjct 457 AGCTCATCAGCGTGCTTGACACACTTGGCCTTCAGATCCTCGATATCCAGGTTACCAGTC 398 Query 138480 TCATCATCACACTTGACACCTACAACTTTCATTCCTGCCATGACTGCACTAGCAGGATTA 138539 | | | |||||||||||| ||||| ||||| || |||||| | ||| |||||| || Sbjct 397 TTACCGTCACACTTGACAGTAACAACCTTCATACCAGCCATGGCAGCAGAAGCAGGGTTG 338 Query 138540 GTTCCATGTGCTGACTCTGGTATCAGACATACATTTCTTTTATCATC-TCCTGATCCTTG 138598 || || || || || | || || || || || |||| ||||| | || || ||| | Sbjct 337 GTACCGTGAGCCGAAACAGGGATAAGGCAGACCTTTCGCTTATCTCCATCACGAGCCTCG 278 Query 138599 ATGATATGCTTGGAT--TGCTAACAGTCCTGCATACTCACCCTGTGATCCTGCGTTAGGT 138656 || || || | ||| || | || || ||| |||||||||||| || | ||| || Sbjct 277 -TGGTAAGCCTTGATACAGCGA--AGACCAGCAAACTCACCCTGTGCACCAGAGTTGGGC 221 Query 138657 TG 138658 || Sbjct 220 TG 219 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 577714463810520