Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_020871.1 Length=133057 Score E Sequences producing significant alignments: (Bits) Value seq101107 244 9e-60 >seq101107 Length=18006 Score = 244 bits (270), Expect = 9e-60 Identities = 630/952 (66%), Gaps = 6/952 (1%) Strand=Plus/Minus Query 89431 AACTGGAACGATATTCGGTATCCGTCTTTCTATCGAGCTTACAAAGAGTTAACTACAAAT 89490 ||||||||||| |||| ||| || || |||||||| || ||||| || | | || || Sbjct 3839 AACTGGAACGACATTCCGTACCCCTCGTTCTATCGGGCGTACAAGGAACTGTCGACCAAC 3780 Query 89491 TACTGGTTGCCTGATGAGGTAGACATGAAGAGCGATGCCAAGCAGTACAACCACTTATCC 89550 | |||| | || || || || ||||||||| || || |||||| | | ||| Sbjct 3779 TTCTGGATCCCCGACGAAGTGGACATGAAGCTGGACGCACGCCAGTACGGTGAACTGTCC 3720 Query 89551 GAAGAAGAGAAATATGCGTTTGATTCCATTATCGGACTTTTAGCTACACTTGACTCACCC 89610 | | ||||| | || | || || || ||||| || | || || || || || || Sbjct 3719 GGACGCGAGAAGAACGCCTACGACTCGATCATCGGCCTGCTGGCCACGCTCGATTCGCCG 3660 Query 89611 CAAACACGTTTTATTTATAATATCGCAGAGTATGTCAGTGATGCCTCTGTTCATGCTATT 89670 || || || || || || || |||| ||||| ||| ||| | | | ||||| | | Sbjct 3659 CAGACCCGGTTCATCTACAACGTCGCCGAGTACATCACCGATCCGGCCGCGCATGCCAAT 3600 Query 89671 ACAGCTATCATTGCACAACAAGAGGCTATTCATAATGAGAGTTATTCTTATGTACTTGCT 89730 | || ||||| | || || || | || ||||| || || || ||||| || || Sbjct 3599 GCGGCGATCATCGGCCAGCAGGAAGTGATACATAACGAAAGCTACAGCTATGTGCTGGCG 3540 Query 89731 TCTATTACTAACTTACAAGAGCAGAATCGAGTATTTGAGGAAGCTAGAACACACCCTACG 89790 || || || | | | | ||||| || || || || || | || || || || Sbjct 3539 TCGATCACCGATCTGCCCAACCAGAACCGGGTGTTCGAACTGGCCCGCACGCATCCGACC 3480 Query 89791 ATTATTAAACGTAATGCACCTATTATGAAGTCTTATGACGATTTCATGAATAACAAAACA 89850 || || | || || || || || ||| || | || ||||| |||||| |||| || Sbjct 3479 ATCATCAGCCGCAACGCGCCGATCATGCAGGCGTACGACGACTTCATGCGCGACAAGACC 3420 Query 89851 CCTGAAAATATGGTAAAAGCTTTAGTACAGTCATCTATCTTAGAGGGTATTAATTTCTAC 89910 | || | || | || | | | ||||| || ||| | ||||| || || ||||| Sbjct 3419 GCGGAGACGCTGCTGAAGTCGCTGATCCAGTCGTCGATCCTGGAGGGCATCAACTTCTAT 3360 Query 89911 AGCGGTTTTGCTTACTTCTATAACCTTGTTCGTCAAAACAAGATGACGGGAACAGGTAAA 89970 ||| || || || ||||| ||||| || || || ||| ||||| || || || || Sbjct 3359 TCCGGCTTCGCCTATTTCTACAACCTGGTGCGGCAGAACCGCATGACCGGCACCGGCAAG 3300 Query 89971 ATCATTAGCTTCATTAATCGTGATGAGTTAGCCCATTCGAAGTTTATTTCTGAGCTAATT 90030 ||||| |||||||| || || || ||| | |||||| | ||||| || ||| | || Sbjct 3299 ATCATCAGCTTCATCAACCGCGACGAGCTGGCCCATACCAAGTTCATCAGCGAGGTGATC 3240 Query 90031 AGAGCTATTGTAGGGGAAAACCCTGAACTACAAACAGATGAACTAAATGACTACGTGTAT 90090 | || || || || || || || ||||| || || | || || | | ||||| | Sbjct 3239 CGCGCCATCGTCGGCGAGAATCCGGAACTGCAGACCAACGAGCTGACGGCTTACGTACAC 3180 Query 90091 -GCTTCTTTTAGACATGCCGTAGAGCTAGAACAAGCG-TGGTCTAGTGAGGTACTACAGG 90148 || ||| || |||||| | ||| || | || ||||| || || || | | Sbjct 3179 AGCGCCTTCGAG-CATGCCATCACGCTGGAG-ACGCAATGGTCGTCGGAAGTGCTGGATG 3122 Query 90149 GCATTGAAGGAATTGATGTGGAAGAGATGTTAGACTATGTAAAATATCGTGCTAATAAAA 90208 |||| || || || |||||||| |||||| | ||| || || || || || || || | Sbjct 3121 GCATCGACGGCATCGATGTGGACGAGATGGTGCGCTACGTGAAGTACCGCGCCAACAAGA 3062 Query 90209 TGTTAGGGATGCTAGGTCTTCAACCAATGTATCAAGGTCAC-ACAGAAAATTCTATGACA 90267 || || ||||| ||| | | | |||| || | || || || ||| ||| | Sbjct 3061 TGGCCGGCATGCTGGGTATCGAGCGGCTGTA-CAGCGATACGACCGACAATGTGATGCCG 3003 Query 90268 TGGATTAAAGCTTACGCCGATAACTTTACAGAAACAAAAACCGACTTTTTCGAAATGCGT 90327 ||||| || || |||||||| ||||| || ||||| || |||||||| ||||| ||||| Sbjct 3002 TGGATCAAGGCCTACGCCGACAACTTCACCGAAACCAAGACCGACTTCTTCGAGATGCGC 2943 Query 90328 AACTCTAGTTACAAGAAAACAAACTTAGACAATGGGTTCGATGACTTATGAG 90379 || | ||||||||||| || ||| | ||||| || ||||| || | |||| Sbjct 2942 AATGCAAGTTACAAGAAGACCAACGTCGACAACGGCTTCGACGATCTCTGAG 2891 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424737296477498