Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13]
177,401 sequences; 1,960,317,893 total letters
Query= NC_020871.1
Length=133057
Score E
Sequences producing significant alignments: (Bits) Value
seq101107 244 9e-60
>seq101107
Length=18006
Score = 244 bits (270), Expect = 9e-60
Identities = 630/952 (66%), Gaps = 6/952 (1%)
Strand=Plus/Minus
Query 89431 AACTGGAACGATATTCGGTATCCGTCTTTCTATCGAGCTTACAAAGAGTTAACTACAAAT 89490
||||||||||| |||| ||| || || |||||||| || ||||| || | | || ||
Sbjct 3839 AACTGGAACGACATTCCGTACCCCTCGTTCTATCGGGCGTACAAGGAACTGTCGACCAAC 3780
Query 89491 TACTGGTTGCCTGATGAGGTAGACATGAAGAGCGATGCCAAGCAGTACAACCACTTATCC 89550
| |||| | || || || || ||||||||| || || |||||| | | |||
Sbjct 3779 TTCTGGATCCCCGACGAAGTGGACATGAAGCTGGACGCACGCCAGTACGGTGAACTGTCC 3720
Query 89551 GAAGAAGAGAAATATGCGTTTGATTCCATTATCGGACTTTTAGCTACACTTGACTCACCC 89610
| | ||||| | || | || || || ||||| || | || || || || || ||
Sbjct 3719 GGACGCGAGAAGAACGCCTACGACTCGATCATCGGCCTGCTGGCCACGCTCGATTCGCCG 3660
Query 89611 CAAACACGTTTTATTTATAATATCGCAGAGTATGTCAGTGATGCCTCTGTTCATGCTATT 89670
|| || || || || || || |||| ||||| ||| ||| | | | ||||| | |
Sbjct 3659 CAGACCCGGTTCATCTACAACGTCGCCGAGTACATCACCGATCCGGCCGCGCATGCCAAT 3600
Query 89671 ACAGCTATCATTGCACAACAAGAGGCTATTCATAATGAGAGTTATTCTTATGTACTTGCT 89730
| || ||||| | || || || | || ||||| || || || ||||| || ||
Sbjct 3599 GCGGCGATCATCGGCCAGCAGGAAGTGATACATAACGAAAGCTACAGCTATGTGCTGGCG 3540
Query 89731 TCTATTACTAACTTACAAGAGCAGAATCGAGTATTTGAGGAAGCTAGAACACACCCTACG 89790
|| || || | | | | ||||| || || || || || | || || || ||
Sbjct 3539 TCGATCACCGATCTGCCCAACCAGAACCGGGTGTTCGAACTGGCCCGCACGCATCCGACC 3480
Query 89791 ATTATTAAACGTAATGCACCTATTATGAAGTCTTATGACGATTTCATGAATAACAAAACA 89850
|| || | || || || || || ||| || | || ||||| |||||| |||| ||
Sbjct 3479 ATCATCAGCCGCAACGCGCCGATCATGCAGGCGTACGACGACTTCATGCGCGACAAGACC 3420
Query 89851 CCTGAAAATATGGTAAAAGCTTTAGTACAGTCATCTATCTTAGAGGGTATTAATTTCTAC 89910
| || | || | || | | | ||||| || ||| | ||||| || || |||||
Sbjct 3419 GCGGAGACGCTGCTGAAGTCGCTGATCCAGTCGTCGATCCTGGAGGGCATCAACTTCTAT 3360
Query 89911 AGCGGTTTTGCTTACTTCTATAACCTTGTTCGTCAAAACAAGATGACGGGAACAGGTAAA 89970
||| || || || ||||| ||||| || || || ||| ||||| || || || ||
Sbjct 3359 TCCGGCTTCGCCTATTTCTACAACCTGGTGCGGCAGAACCGCATGACCGGCACCGGCAAG 3300
Query 89971 ATCATTAGCTTCATTAATCGTGATGAGTTAGCCCATTCGAAGTTTATTTCTGAGCTAATT 90030
||||| |||||||| || || || ||| | |||||| | ||||| || ||| | ||
Sbjct 3299 ATCATCAGCTTCATCAACCGCGACGAGCTGGCCCATACCAAGTTCATCAGCGAGGTGATC 3240
Query 90031 AGAGCTATTGTAGGGGAAAACCCTGAACTACAAACAGATGAACTAAATGACTACGTGTAT 90090
| || || || || || || || ||||| || || | || || | | ||||| |
Sbjct 3239 CGCGCCATCGTCGGCGAGAATCCGGAACTGCAGACCAACGAGCTGACGGCTTACGTACAC 3180
Query 90091 -GCTTCTTTTAGACATGCCGTAGAGCTAGAACAAGCG-TGGTCTAGTGAGGTACTACAGG 90148
|| ||| || |||||| | ||| || | || ||||| || || || | |
Sbjct 3179 AGCGCCTTCGAG-CATGCCATCACGCTGGAG-ACGCAATGGTCGTCGGAAGTGCTGGATG 3122
Query 90149 GCATTGAAGGAATTGATGTGGAAGAGATGTTAGACTATGTAAAATATCGTGCTAATAAAA 90208
|||| || || || |||||||| |||||| | ||| || || || || || || || |
Sbjct 3121 GCATCGACGGCATCGATGTGGACGAGATGGTGCGCTACGTGAAGTACCGCGCCAACAAGA 3062
Query 90209 TGTTAGGGATGCTAGGTCTTCAACCAATGTATCAAGGTCAC-ACAGAAAATTCTATGACA 90267
|| || ||||| ||| | | | |||| || | || || || ||| ||| |
Sbjct 3061 TGGCCGGCATGCTGGGTATCGAGCGGCTGTA-CAGCGATACGACCGACAATGTGATGCCG 3003
Query 90268 TGGATTAAAGCTTACGCCGATAACTTTACAGAAACAAAAACCGACTTTTTCGAAATGCGT 90327
||||| || || |||||||| ||||| || ||||| || |||||||| ||||| |||||
Sbjct 3002 TGGATCAAGGCCTACGCCGACAACTTCACCGAAACCAAGACCGACTTCTTCGAGATGCGC 2943
Query 90328 AACTCTAGTTACAAGAAAACAAACTTAGACAATGGGTTCGATGACTTATGAG 90379
|| | ||||||||||| || ||| | ||||| || ||||| || | ||||
Sbjct 2942 AATGCAAGTTACAAGAAGACCAACGTCGACAACGGCTTCGACGATCTCTGAG 2891
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424737296477498
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |