Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq79216 105 1e-17 seq174782 86.0 1e-11 seq104553 84.2 4e-11 >seq79216 Length=33065 Score = 105 bits (116), Expect = 1e-17 Identities = 163/233 (70%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 ||||||||||||| || || ||||| |||| || | |||||| || || ||||| Sbjct 3632 ATACCACCTCTCAGGCGCAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCA 3691 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 || | || | ||| || | || || || ||||| || | ||||| || || || Sbjct 3692 GAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCTGGG 3751 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || ||||| |||||||| || |||| ||| | ||| ||| || ||| | ||| Sbjct 3752 GGGATGCCTTCCTTATCTTGGATCTTGGCTTTCACATTCTCAATGGTGTCGCTGGGCTCC 3811 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363 || || || || || || || ||||| || || || ||||| || |||||||| Sbjct 3812 ACCTCCAGGGTGATGGTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCATTTT 3864 >seq174782 Length=7384 Score = 86.0 bits (94), Expect = 1e-11 Identities = 121/170 (71%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 193151 TACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAATCGTC 193210 ||| ||||| | |||| ||| || ||| || ||||| || || || | ||| || Sbjct 130 TACAAGATGAAGAGTAGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGTCCATCTTC 189 Query 193211 TAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTG 193270 | ||| ||||| ||||| || | ||| || ||||||||||| |||||||| ||||| || Sbjct 190 CAGTTGCTTTCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTG 249 Query 193271 TATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAG 193320 || |||| || | |||| || ||||| || ||||| || |||| Sbjct 250 GATCTTGGCCTTCACATTTTCTATTGTATCCGAGAGTTCAACCTCGAGAG 299 >seq104553 Length=43841 Score = 84.2 bits (92), Expect = 4e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 193152 ACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAATCGTCT 193211 || ||||| | |||| ||| || ||| || ||||| || || || | ||| || Sbjct 35485 ACAAGATGAAGAGTAGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGCCCATCTTCC 35544 Query 193212 AATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGT 193271 | ||| || || ||||| || | | | || ||||||||||| |||||||| ||||| || Sbjct 35545 AGTTGCTTGCCAGCAAAGATCAGTTTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGG 35604 Query 193272 ATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTA 193331 || | || || | |||| || ||||| || | ||| | || |||| || || || Sbjct 35605 ATCTCGGGCTTCACATTTTCTATTGTATCCGAGGGTTCAGCCTCGAGAGCGATGGTCTTC 35664 Query 193332 CCTGTTAGCGTTTTTACAAATATTTGCAT 193360 ||| | || ||| | || || || ||||| Sbjct 35665 CCTATAAGGGTTGTCACGAAAATCTGCAT 35693 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 897659405122320