Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq161317 104 5e-17 seq174782 102 2e-16 seq135935 98.7 2e-15 seq104553 95.1 2e-14 seq122414 93.3 8e-14 seq76308 93.3 8e-14 seq106537 86.0 1e-11 seq21029 84.2 4e-11 >seq161317 Length=2104 Score = 104 bits (114), Expect = 5e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 |||||||| | |||||| | || || || | ||||| || || || || || || Sbjct 1303 ATACCACCACGAAGACGGAGAACCAAGTGGAGAGTAGATTCCTTCTGAATGTTGTAGTCG 1362 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | ||||| |||| || | ||| || ||||| ||||| | || ||||||||| || Sbjct 1363 GAAAGAGTTCGGCCATCTTCAAGTTGCTTGCCAGCGAAGATGAGTCGCTGTTGATCGGGA 1422 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || || || || || || || || | || |||||| || | ||| || || || Sbjct 1423 GGAATACCCTCCTTGTCCTGGATCTTGCTCTTCACATTATCAATGGTATCGGATGACTCG 1482 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||| ||||||||||| || ||||| | || || | || || ||||| Sbjct 1483 ACTTCCAGAGTAATGGTCTTTCCAGTGAGGGTCTTGACGAAGATTTGCAT 1532 >seq174782 Length=7384 Score = 102 bits (112), Expect = 2e-16 Identities = 137/188 (73%), Gaps = 2/188 (1%) Strand=Plus/Plus Query 192310 CCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATCAGA 192368 ||||| | ||| | ||||| | ||| | ||||| ||| ||| || || || || ||||| Sbjct 113 CCACCACAAAGTCTCAATACAAGATGAAGAGTAGACTCCTTTTGA-ATGTTGTAGTCAGA 171 Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428 || || ||| |||| |||| ||| || ||||||||||| | ||| || |||||||| || Sbjct 172 CAAAGTACGTCCATCTTCCAGTTGCTTTCCAGCAAAGATCAGTCTTTGCTGATCAGGAGG 231 Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488 |||||||| ||||| || || || || ||||| ||| | ||| || ||| || Sbjct 232 AATTCCTTCCTTATCCTGGATCTTGGCCTTCACATTTTCTATTGTATCCGAGAGTTCAAC 291 Query 192489 TTCTAGAG 192496 || |||| Sbjct 292 CTCGAGAG 299 >seq135935 Length=6997 Score = 98.7 bits (108), Expect = 2e-15 Identities = 136/189 (72%), Gaps = 1/189 (1%) Strand=Plus/Plus Query 192347 CTTTAGAGATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGA 192406 |||| || || || || |||||||| | || ||| ||||||| || || | |||| Sbjct 1395 CTTTTGA-ATGTTGTAGTCAGATAAACTATGTCTATCTGCCAATTGCTTGTCAACTAAGA 1453 Query 192407 TTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAG 192466 | | ||| ||||||||||| || |||||||| ||||| || || ||| |||||||| Sbjct 1454 TCAGTCTTTGTTGATCAGGAGGAATTCCTTCCTTATCCTGGATCTTAGCCTTTACATTTT 1513 Query 192467 TTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAA 192526 |||| | |||||| ||| || || ||| | ||||| || || | | |||| | || Sbjct 1514 TTATTGTATCTGAGAGTTCAACCTCAAGAATGATGGTCTTCCCTATAAGGATTTTCACAA 1573 Query 192527 ATATCTGCA 192535 | ||||||| Sbjct 1574 AAATCTGCA 1582 >seq104553 Length=43841 Score = 95.1 bits (104), Expect = 2e-14 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATCAG 192367 |||||| | ||| | || || | ||| | ||||| ||| ||| || || || || |||| Sbjct 35466 ACCACCACGAAGTCTCAACACAAGATGAAGAGTAGACTCCTTTTGA-ATGTTGTAGTCAG 35524 Query 192368 ATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTG 192427 | || || || |||| |||| ||| || ||||||||||| | | | || |||||||| | Sbjct 35525 ACAAAGTACGCCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTTTTTGCTGATCAGGAG 35584 Query 192428 GTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTA 192487 | |||||||| ||||| || || | || ||||| ||| | ||| || | ||| Sbjct 35585 GAATTCCTTCCTTATCCTGGATCTCGGGCTTCACATTTTCTATTGTATCCGAGGGTTCAG 35644 Query 192488 CTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 | || |||| ||||| || || | | ||| | | || |||||||| Sbjct 35645 CCTCGAGAGCGATGGTCTTCCCTATAAGGGTTGTCACGAAAATCTGCAT 35693 >seq122414 Length=20378 Score = 93.3 bits (102), Expect = 8e-14 Identities = 161/230 (70%), Gaps = 3/230 (1%) Strand=Plus/Minus Query 192311 CACCTCTAAGACGTAATACTAAATGTAAAGTAGCC-TCTTTAGAGATATTATAATCAGAT 192369 |||| | ||| | || || | ||| | || || | ||||| || || || || ||||| Sbjct 19043 CACCACGAAGTCTCAACACAAGATGAAGAGCAGACATCTTTTGA-ATGTTGTAGTCAGAC 18985 Query 192370 AATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGT 192429 || | | |||| |||| ||| || ||||||||||| ||||| || |||||||| || Sbjct 18984 AAATTACACCCATCTTCCAGTTGCTTGCCAGCAAAGATCAATCTTTGCTGATCAGGAGGA 18925 Query 192430 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACT 192489 |||| ||| |||| || || || ||||||| ||| | ||||| ||||| | Sbjct 18924 ATTCTTTCCTTATTCTGGATCTT-GGCCTTACATTTTCTATTGTCTCTGAGGATTCAGCC 18866 Query 192490 TCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539 || ||||| ||||| || || | || |||| | || |||||||| || Sbjct 18865 TCAAGAGTGATGGTCTTCCCCATAAAGATTTTGACCAAAATCTGCATCTT 18816 >seq76308 Length=26140 Score = 93.3 bits (102), Expect = 8e-14 Identities = 128/179 (72%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 192361 TAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGA 192420 || ||||| || || ||| |||| |||| ||| | ||||||||||| | ||| || || Sbjct 19690 TAGTCAGACAAAGTACGTCCATCTTCCAGTTGCCTGCCAGCAAAGATCAGTCTTTGCTGC 19631 Query 192421 TCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGAC 192480 ||||| | |||||||| ||||| || || || |||||||| | | | |||||| Sbjct 19630 TCAGGAAGAATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTCCTGTTGTATCTGAG 19571 Query 192481 GATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539 ||||| || | || | |||||| || || | | ||||| || || | |||||| || Sbjct 19570 GATTCAACCTTGAGGGAAATGGTCTTCCCCATAAGGGTTTTCATGAAAACCTGCATCTT 19512 >seq106537 Length=2788 Score = 86.0 bits (94), Expect = 1e-11 Identities = 162/236 (69%), Gaps = 2/236 (1%) Strand=Plus/Minus Query 192305 TAATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAA 192363 || ||||||| ||| | || || | ||| | | || ||| ||| || || || || Sbjct 365 TAGTACCACCATGAAGTCTCAACACAAGATGAACAATAAGCTCCTTTTGA-ATGTTGTAG 307 Query 192364 TCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCA 192423 ||||| || | || |||| |||| || || ||||||||||| | ||| || |||||| Sbjct 306 TCAGACAAAATACGCCCATCTTCCAGATGCTTGCCAGCAAAGATCAGTCTTTGCTGATCA 247 Query 192424 GGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGAT 192483 || || |||||||| ||||| || || | |||||||| ||| | ||| || | | Sbjct 246 GGAGGAATTCCTTCCTTATCCTGGATCTAGGCCTTTACATTTTCTATTGTATCCGAGGGT 187 Query 192484 TCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539 || | || ||||| ||| | || | | | ||||| | || |||||||| || Sbjct 186 TCAGCCTCAAGAGTGATGATCTTCCTCATAAGGGTTTTTGTGAAAATCTGCATCTT 131 >seq21029 Length=19983 Score = 84.2 bits (92), Expect = 4e-11 Identities = 94/123 (76%), Gaps = 2/123 (2%) Strand=Plus/Minus Query 192325 AATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATCAGATAATGTTCGTTCATC 192383 || || | ||| | ||| | ||| ||| || || || || ||||| || || | | |||| Sbjct 18000 AACACGAGATGGAGAGTGGGCTCCTTTTGA-ATGTTGTAGTCAGACAAAGTGCATCCATC 17942 Query 192384 ATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATC 192443 || | |||||| ||||||||||||||||| || |||||||| || ||| |||| ||||| Sbjct 17941 TTCTACTTGTTTGCCAGCAAAGATTAATCTTTGCTGATCAGGAGGAATTTCTTCCTTATC 17882 Query 192444 TTG 192446 || Sbjct 17881 CTG 17879 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 982242325876350