Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13]
177,401 sequences; 1,960,317,893 total letters
Query= NC_021249.1
Length=282895
Score E
Sequences producing significant alignments: (Bits) Value
seq161317 100 5e-16
seq99161 84.2 4e-11
>seq161317
Length=2104
Score = 100 bits (110), Expect = 5e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
|||||||| | ||| || | || || || | ||||| || || ||| || || ||
Sbjct 1303 ATACCACCACGAAGACGGAGAACCAAGTGGAGAGTAGATTCCTTCTGAATGTTGTAGTCG 1362
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
|| | || ||| | || || | ||| || ||||| || || | || |||||| || ||
Sbjct 1363 GAAAGAGTTCGGCCATCTTCAAGTTGCTTGCCAGCGAAGATGAGTCGCTGTTGATCGGGA 1422
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || || || || || || || || | || |||||| || ||||| || || ||
Sbjct 1423 GGAATACCCTCCTTGTCCTGGATCTTGCTCTTCACATTATCAATGGTATCGGATGACTCG 1482
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
||||| ||||||||||| || ||||| | || || | ||| || |||||
Sbjct 1483 ACTTCCAGAGTAATGGTCTTTCCAGTGAGGGTCTTGACGAAGATTTGCAT 1532
>seq99161
Length=19027
Score = 84.2 bits (92), Expect = 4e-11
Identities = 130/186 (70%), Gaps = 0/186 (0%)
Strand=Plus/Minus
Query 171887 AATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCT 171946
||| || || || || |||| | |||| |||| ||| || |||||||| || | |||
Sbjct 11619 AATGTTGTAGTCAGACAAAGCACACTCGTTTTCCAGTTGCTTGCCAGCAAAGATCAGTCT 11560
Query 171947 CTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGT 172006
|| || ||||| || |||||||| ||||| || | || |||||||| ||| ||
Sbjct 11559 TTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGACCTTGGCCTTTACATTTTCTATTGT 11500
Query 172007 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTG 172066
||| | || || | | ||| | ||||| || | | | ||||| ||||| |||||
Sbjct 11499 ATCCAAGGACTCAGCCTTGAGAATGATGGTCTTCTCCATAAGGGTTTTCATGAAAATCTG 11440
Query 172067 CATTTT 172072
||||||
Sbjct 11439 CATTTT 11434
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 903128849605800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |