Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13]
177,401 sequences; 1,960,317,893 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq172910 179 1e-39
seq174480 154 4e-32
seq126732 93.3 1e-13
seq126983 86.0 2e-11
>seq172910
Length=5564
Score = 179 bits (198), Expect = 1e-39
Identities = 573/879 (65%), Gaps = 15/879 (2%)
Strand=Plus/Plus
Query 155630 GTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTT 155689
||| || | ||| ||| ||||||||| || || |||||| || | ||||| |||||
Sbjct 2988 GTACTCAATAATTTCAGTGCACAGGTTGGAGCTTCGGATGGTACCGAGGTTCTTTTGGTT 3047
Query 155690 AGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGC 155749
|| | ||| || ||||||||||| || ||| ||||| |||| ||||| |||| ||
Sbjct 3048 GCTCTTGCGGTTGCAGGCATCCTTGTAGAGCATGAATGGGTTTCCGGTCTCAGTCTGGGC 3107
Query 155750 GTCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGA 155809
|| ||||| ||| || | | || || || |||| |||| |||
Sbjct 3108 CTCAAGAATGGCGTACCAAAGTTTCTGAGCCTTGATAGTCTTGCGACCCTTGCCCTCCTT 3167
Query 155810 CTCATA--TTTCATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGG 155867
||| || |||| || | ||| | | | ||||| ||||| || || || ||||||
Sbjct 3168 CTCGTACTTTTCGTACAGAGCCTC--GAACTCCTCTCCGTAGCAGTCGGCGAGGCCAGGG 3225
Query 155868 CACTTATCGGGGCAAAACAGCGACCAAATTTTATTACCGATT--ACACGCTCCATAAATA 155925
|||| | |||||| | ||||| ||| || | || ||||||| ||| || |
Sbjct 3226 CACTCGTTGGGGCACATCAGCGTCCAGTCGCCGTT--CTTTTCAACACGCTTCATGAAAA 3283
Query 155926 CATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGAT 155985
|||| ||||| || ||||||||| | || |||||| | ||||| |
Sbjct 3284 GATCAGGGATCCAAAGGGCGAGGAAAAGGTCACGGGCACGGACCTCCTCTTTACCGTGGT 3343
Query 155986 TCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAA 156045
|||| || || || | ||| || | ||||| || ||||| || || || ||||
Sbjct 3344 TCTTACGGAGATCAAGGAACTCGAAGACATCAGAGTGCCAAGGCTCGAGGTAGATGGCAA 3403
Query 156046 AACTACCATTCCTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACAC 156102
|| ||| | |||| |||||||| || ||||| |||||||| || ||||||||||
Sbjct 3404 AAGCACCGGGTCGCTTGTTGCCACCCTGGTCGACATAGCGAGCAGTGTTGTTGAAGACAC 3463
Query 156103 CTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATG 156162
|||||||||| || ||| || || || || ||||| ||| || | || |||| |
Sbjct 3464 GAAGCATAGGAACAACACCGTTCGATGTACCGTTGGTACCGGCGATGTAGGAGCCAGTAG 3523
Query 156163 AGCGAACATTATGAATATGTAGTCCAATACCACCTGACCAT-TTAGAAATTTGAGCGCAT 156221
|| | | || | | || ||||||||||| | |||| || || || || ||
Sbjct 3524 CACGGATACGGTGCACGTTCAGACCAATACCACCAG-CCATCTTGGAGATCATGGCACAG 3582
Query 156222 TCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCAT-TGATAGTAGATAGCA 156280
||| | ||||| | | || || |||||| || || | ||| | | ||| ||||
Sbjct 3583 GTCTTGAGAGTATCGTAGATTCCCTCAATACTGTCGTCCTTCATATCAACCAAGA-AGCA 3641
Query 156281 CGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAA 156340
|| ||||| || | || || || |||||||| || || || | ||||| | ||
Sbjct 3642 AGATGACAATTGGGGCTGAGGGGTGCCGGCGTTGAAGAGCGTGGGAGAAGCATGTGTGAA 3701
Query 156341 ATACTTATTAGACATATAATCGTATGTCTCCTTAATCTTCTCAAGATTAGACCCGTGAAT 156400
| || | ||||| | |||||||||| | ||| | || | || |||
Sbjct 3702 GAATTTGCTGGACATCAGGTTGTATGTCTCCAAGACTCGCTCGATATCATCACCCCAAAT 3761
Query 156401 ACAGATAGAGACCCTCATCCACATATGCTGAGGACGCTCTACAATCACTCCATCAATTCG 156460
|| | ||| || | ||| ||| |||||||| ||||| |||||| || |||||
Sbjct 3762 ACCAACAGACACACGCATGATCATGTGCTGAGGGCGCTCGACAATCTTACCGTCAATCTT 3821
Query 156461 CAGAAGGTATGCGCGTTCCAGAGTTTTAAACCCGAAATA 156499
|| ||||||| || |||| ||| || || || || ||
Sbjct 3822 GAGGAGGTATGATCGCTCCAAAGTCTTGAAGCCAAAGTA 3860
>seq174480
Length=6985
Score = 154 bits (170), Expect = 4e-32
Identities = 467/717 (65%), Gaps = 6/717 (1%)
Strand=Plus/Plus
Query 133232 GCGTTTTTTGCTGCGAGTGATGGTATTGTTCTTGAAAATTTAGGAACACGGTTTATGGGA 133291
|| ||||| ||||| |||||||||||| || || | | || || | ||
Sbjct 889 GCTTTTTTCGCTGCCTCTGATGGTATTGTCAACGAGAACCTCGTCGAGCGATTCAGTGGC 948
Query 133292 GAAGTTCAACTGGCCGAAGCCCGTGCCTTTTATGGGCTACAGATTGCGATGGAAAATATC 133351
|| || || | |||| || ||| ||| || || | ||||| |||||| || |||
Sbjct 949 GAGGTCCAGATCCCCGAGGCTCGTTGCTTCTACGGCTTCCAGATCATGATGGAGAACATC 1008
Query 133352 CATTCTATCACATATTCTACTCTAATTGATACTTACATCAAAGATACCGTCCAGAAGCAC 133411
|| || || || || || ||||| || |||||||| || ||| |||| |
Sbjct 1009 CACTCCGAGACCTACTCCCTGCTCATTGACACCTACATCAAGGAGCCCGCCCAGCGAACC 1068
Query 133412 AAACTATTCAACGCCATTAGCGAATTTCCT-TGTATTAAAAAGAAATCTGACTGGGCTAT 133470
| || || ||||||||| | || ||| || || |||||| | |||||||| ||
Sbjct 1069 TACCTCTTTAACGCCATT-GAGACCATCCCCTGCATCCGAAAGAAGGCCGACTGGGCCAT 1127
Query 133471 TAAATGGATCCAGGACAAGCGTGCGAGTTTTGCTACTCGTCTCGTTGCTTTTGCTGTAGT 133530
|||||||||||| ||| | ||||| |||||||||||||| |||| ||
Sbjct 1128 CCGATGGATCCAGGATAAGGACTCCTCATTTGCCCAGCGTCTCGTTGCTTTCGCTGCTGT 1187
Query 133531 AGAGGGCAtttttttCAGTGGTGCGTTCTGCTCTATTTTTTGGCTTAAAAAGCGTGGTAT 133590
||||| || || ||||||||||| ||| |||||| || ||||| || ||||||||| |
Sbjct 1188 TGAGGGTATCTTCTTCAGTGGTGCCTTCGCCTCTATCTTCTGGCTCAAGAAGCGTGGTCT 1247
Query 133591 TCTACCTGGACTGTGTTTTTCTAACGAACTTATTTCAAGGGACGAGGCACTTCACACCGA 133650
| || || ||| || || ||||| || || || | || |||| |||||||| ||
Sbjct 1248 CATGCCCGGTCTGACCTTCTCCAACGAGCTCATCTCTCGTGATGAGGGTCTTCACACTGA 1307
Query 133651 ATTTGCCGTTTTACTTCACTCTAAATTAGAGCGACCACTCAAAAAGAATAAGATTGAAGA 133710
|||||| | || |||||| | | || | | || ||| | | ||| | ||
Sbjct 1308 CTTTGCCTGCCTCCTCCACTCTCACCTCAAGGGTCGTGCCAGCAAGCAGATGATCCAGGA 1367
Query 133711 AATTATTAGAGAAGCGGTTGAAATTGAGGTTGAATTTATCAATAGTGCTCTGCC--GTGC 133768
|| |||| || || || |||||| || || ||| | ||||| || ||||
Sbjct 1368 TATCATTACTGATGCCGTCACGATTGAGCAGGAGTTCCTCACTGAGGCTCTTCCCTGTGC 1427
Query 133769 CGTTTAATTGGTATGAATGATGTGCTGATGCAGCGTTATATTGAATTTGTAGCTGACAGA 133828
| || | || ||||| || || ||| ||| || ||||| || || ||||| |
Sbjct 1428 CCTT--CTCGGCATGAACTCTGACCTCATGAAGCAGTACATTGAGTTCGTCGCTGATCGT 1485
Query 133829 TTGGCCGTTCAGTTAGGTGGGGATAAGATTTACGGTTCCGCCAATCCATTCGACTGGATG 133888
| || | | || || ||| ||||| || |||| || ||||||| |||
Sbjct 1486 CTCCTTGTCGCGCTTGGCAACGAGAAGGTTTACAAGGCCACCAACCCCTTCGACTTCATG 1545
Query 133889 GAGAGCATTAGCATTGAATCAAAGACTAATTTCTTCGAGGCGAGGGTAGCCGAATAC 133945
|||| ||| | ||| ||||| || ||||||||| | | || ||||| |||
Sbjct 1546 GAGAACATCTCCCTTGGTGGCAAGACCAACTTCTTCGAGAAGCGTGTTGCCGACTAC 1602
>seq126732
Length=2175
Score = 93.3 bits (102), Expect = 1e-13
Identities = 105/140 (75%), Gaps = 3/140 (2%)
Strand=Plus/Minus
Query 301813 AGAATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCA 301872
|||||||| | | ||| || |||||| | || ||||| |||||||| ||||||||
Sbjct 1562 AGAATTTCCTTGAGACGTGGCACACCAAGAGTAACGTT---CTTGGACGACACACCAGCG 1506
Query 301873 AAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATC 301932
|| ||||| || ||||| || | ||||||| |||||||||||| || || || |
Sbjct 1505 AAATGGAAGGTGTTCAGTGTCATCTGAGTAGCAGGCTCACCAATAGACTGCGCAGCCAGA 1446
Query 301933 ATACCAACCATTTCTCCTGG 301952
| |||||||||||| || ||
Sbjct 1445 ACACCAACCATTTCACCAGG 1426
>seq126983
Length=15004
Score = 86.0 bits (94), Expect = 2e-11
Identities = 137/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 302620 GTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCT 302679
|| || || ||||| || || || || |||| || ||||| |||||||| || | ||
Sbjct 11166 GTCTTGACGGCTGTGTCGATGAGCCCTTCACGCCCCCCCATGGCATGGAAAAAGAATTCG 11107
Query 302680 TCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCG 302739
||| || || | | ||||| |||| || || ||||| ||||||| || |
Sbjct 11106 GTGGGTGTGAGGCCGGCCAGGTAGGAGTTCTCCACAAAGCCACGGCTCTCGGGCCCATAG 11047
Query 302740 TCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCA 302799
|| |||| | ||||| ||||| |||| || || | || ||||||| ||||| ||
Sbjct 11046 TCATCCTTGATGAAGTGCGGCAGAGTCCGGTGCTTGAACCCAAATGGGATCCGCTTGCCC 10987
Query 302800 TCAACGTTCTGCTGTCC 302816
|| ||||||||||| ||
Sbjct 10986 TCCACGTTCTGCTGCCC 10970
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1468472231726137
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |