Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13]
177,401 sequences; 1,960,317,893 total letters
Query= NC_021339.1
Length=51077
Score E
Sequences producing significant alignments: (Bits) Value
seq134661 168 2e-37
>seq134661
Length=10369
Score = 168 bits (186), Expect = 2e-37
Identities = 218/299 (73%), Gaps = 4/299 (1%)
Strand=Plus/Minus
Query 40199 CCCGTACTTCCGGGTGACGTACTGGATGACCTCGCCACGACGCCGGTCATC--GAAGTCG 40256
|||||| || || | |||||| | ||| || ||| | || || | ||| ||| |||
Sbjct 3517 CCCGTATTTGCGCGCGACGTAGTCGATCACTTCGTCGCGGCG--GTCCATGCAGAAATCG 3460
Query 40257 ATGTCGACATCGGGCATGGACACGCGCTCGGGGTTCAGGAAGCGCTCGAAGATGAGCCCG 40316
||||||| |||||||| |||||||| || || ||||||||||||||||| | || |
Sbjct 3459 ATGTCGAAGTCGGGCATCGACACGCGTTCCGGATTCAGGAAGCGCTCGAACAGCAGGTTG 3400
Query 40317 TGCTCCAGCGGGTCGAGGTCGGTGATCCCGAGGACGTAGGCGACCAGCGAACCGGCCGCA 40376
| |||||| || |||||||||||| || | | || |||||||||||||| ||
Sbjct 3399 TAGGGCAGCGGATCCAGGTCGGTGATCTTCAGCGCCCACGCCACCAGCGAACCGGCACCA 3340
Query 40377 GAGCCCCGCCCAGGGCCGACCCAGACCCCGTTCTCCTTCGCCCAGCGGATGAAGTCCGCG 40436
|| || || || ||||||| | || || | | ||| |||| |||||||||| ||
Sbjct 3339 GAACCACGGCCCGGGCCGATCGGGATGCCCTGGTTCTTGCCCCACTGGATGAAGTCGGCC 3280
Query 40437 ACGACGAGGAAGTACGACGGGAACCCCATCTGGATGATCATGTCGATCTCGTACTGGAG 40495
|||| |||||||| ||||| ||||||| |||||| |||||| |||| | | |||
Sbjct 3279 ACGATCAGGAAGTAGCCGGGGAAACCCATCTTGATGATGGTGTCGAGCTCGAATTCGAG 3221
Score = 132 bits (146), Expect = 2e-26
Identities = 265/392 (68%), Gaps = 12/392 (3%)
Strand=Plus/Minus
Query 39012 GGCGGCAGGACCCGAAGGCCCATGCGCCGTGCCTCGCCGAGGTACGTGGCCATCTTGTTC 39071
|||||||| || ||||| | | || ||||| ||||| | | ||| |||||
Sbjct 4713 GGCGGCAGCACGGTCAGGCCGAGGTTGCGCACCTCGTCGAGGAAGCCGACCACCTTGTCG 4654
Query 39072 TTGTCGTCGCCCACCGAGGTGAGCGCAGCCGCCATGTACTCGGCCGGGTAGTGCGTCTTC 39131
||| ||| |||| | |||| ||||||||| ||||||||||||| || |||
Sbjct 4653 GTGTTGTCCATGTCCGAAGACAGCGTGGCCGCCATGAACTCGGCCGGGTAATGGCGCTTG 4594
Query 39132 AACCACGCCGTGCGGTACGCGATGAGTCCGTACGCCGCCGAGTGCGCCTTGTTGAAGGCG 39191
| |||||| || |||| || || |||| || || | ||||| |||||||||| ||
Sbjct 4593 AGCCACGCGGTCTGGTAACTGACCAGCGCGTAGGCAGCGGCGTGCGACTTGTTGAAGCCG 4534
Query 39192 TAGCCAGCGAAGGGGACCAGCACGTCCCACA------CTGCCTGGATGGCACCGTCCGAG 39245
||||| ||||| ||| || ||| | | | |||| ||| ||||| |
Sbjct 4533 TAGCCGGCGAACTTCTCCATCAGGTCGAAGATCTCGTCGGCCT---TGGGGCCGTC---G 4480
Query 39246 TAGCCTCGCTCGCGCGCTCCCTTCTGGAAGTTCACGAACTCCTTGGCCAGAACCTCGGGC 39305
||| | || | ||| |||| ||||| || || | |||||||| | | |||
Sbjct 4479 ACGCCGCCCTTGGCCGCACCCTCGCGGAAGATCTCGCGGTGCTTGGCCATTTCGGCCGGC 4420
Query 39306 TTCTTCTTGCCCATCGCCCGGCGAAGCAGGTCGGCCTGACCCAGGGTGTACCCGGCCATG 39365
||||||||||||||| || || ||||||||||| ||||| | ||| ||| | | |
Sbjct 4419 ACCTTCTTGCCCATCGCACGACGCAGCAGGTCGGCGCCGCCCAGCGAGTAGCCGCCGACG 4360
Query 39366 ACCTGTGCAACCTTCTGCACCTGCTCCTGGTA 39397
| ||| || | || | |||||||||||||||
Sbjct 4359 ATCTGCGCCATCTGCATCACCTGCTCCTGGTA 4328
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 162980733953718
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |