Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_021339.1 Length=51077 Score E Sequences producing significant alignments: (Bits) Value seq134661 168 2e-37 >seq134661 Length=10369 Score = 168 bits (186), Expect = 2e-37 Identities = 218/299 (73%), Gaps = 4/299 (1%) Strand=Plus/Minus Query 40199 CCCGTACTTCCGGGTGACGTACTGGATGACCTCGCCACGACGCCGGTCATC--GAAGTCG 40256 |||||| || || | |||||| | ||| || ||| | || || | ||| ||| ||| Sbjct 3517 CCCGTATTTGCGCGCGACGTAGTCGATCACTTCGTCGCGGCG--GTCCATGCAGAAATCG 3460 Query 40257 ATGTCGACATCGGGCATGGACACGCGCTCGGGGTTCAGGAAGCGCTCGAAGATGAGCCCG 40316 ||||||| |||||||| |||||||| || || ||||||||||||||||| | || | Sbjct 3459 ATGTCGAAGTCGGGCATCGACACGCGTTCCGGATTCAGGAAGCGCTCGAACAGCAGGTTG 3400 Query 40317 TGCTCCAGCGGGTCGAGGTCGGTGATCCCGAGGACGTAGGCGACCAGCGAACCGGCCGCA 40376 | |||||| || |||||||||||| || | | || |||||||||||||| || Sbjct 3399 TAGGGCAGCGGATCCAGGTCGGTGATCTTCAGCGCCCACGCCACCAGCGAACCGGCACCA 3340 Query 40377 GAGCCCCGCCCAGGGCCGACCCAGACCCCGTTCTCCTTCGCCCAGCGGATGAAGTCCGCG 40436 || || || || ||||||| | || || | | ||| |||| |||||||||| || Sbjct 3339 GAACCACGGCCCGGGCCGATCGGGATGCCCTGGTTCTTGCCCCACTGGATGAAGTCGGCC 3280 Query 40437 ACGACGAGGAAGTACGACGGGAACCCCATCTGGATGATCATGTCGATCTCGTACTGGAG 40495 |||| |||||||| ||||| ||||||| |||||| |||||| |||| | | ||| Sbjct 3279 ACGATCAGGAAGTAGCCGGGGAAACCCATCTTGATGATGGTGTCGAGCTCGAATTCGAG 3221 Score = 132 bits (146), Expect = 2e-26 Identities = 265/392 (68%), Gaps = 12/392 (3%) Strand=Plus/Minus Query 39012 GGCGGCAGGACCCGAAGGCCCATGCGCCGTGCCTCGCCGAGGTACGTGGCCATCTTGTTC 39071 |||||||| || ||||| | | || ||||| ||||| | | ||| ||||| Sbjct 4713 GGCGGCAGCACGGTCAGGCCGAGGTTGCGCACCTCGTCGAGGAAGCCGACCACCTTGTCG 4654 Query 39072 TTGTCGTCGCCCACCGAGGTGAGCGCAGCCGCCATGTACTCGGCCGGGTAGTGCGTCTTC 39131 ||| ||| |||| | |||| ||||||||| ||||||||||||| || ||| Sbjct 4653 GTGTTGTCCATGTCCGAAGACAGCGTGGCCGCCATGAACTCGGCCGGGTAATGGCGCTTG 4594 Query 39132 AACCACGCCGTGCGGTACGCGATGAGTCCGTACGCCGCCGAGTGCGCCTTGTTGAAGGCG 39191 | |||||| || |||| || || |||| || || | ||||| |||||||||| || Sbjct 4593 AGCCACGCGGTCTGGTAACTGACCAGCGCGTAGGCAGCGGCGTGCGACTTGTTGAAGCCG 4534 Query 39192 TAGCCAGCGAAGGGGACCAGCACGTCCCACA------CTGCCTGGATGGCACCGTCCGAG 39245 ||||| ||||| ||| || ||| | | | |||| ||| ||||| | Sbjct 4533 TAGCCGGCGAACTTCTCCATCAGGTCGAAGATCTCGTCGGCCT---TGGGGCCGTC---G 4480 Query 39246 TAGCCTCGCTCGCGCGCTCCCTTCTGGAAGTTCACGAACTCCTTGGCCAGAACCTCGGGC 39305 ||| | || | ||| |||| ||||| || || | |||||||| | | ||| Sbjct 4479 ACGCCGCCCTTGGCCGCACCCTCGCGGAAGATCTCGCGGTGCTTGGCCATTTCGGCCGGC 4420 Query 39306 TTCTTCTTGCCCATCGCCCGGCGAAGCAGGTCGGCCTGACCCAGGGTGTACCCGGCCATG 39365 ||||||||||||||| || || ||||||||||| ||||| | ||| ||| | | | Sbjct 4419 ACCTTCTTGCCCATCGCACGACGCAGCAGGTCGGCGCCGCCCAGCGAGTAGCCGCCGACG 4360 Query 39366 ACCTGTGCAACCTTCTGCACCTGCTCCTGGTA 39397 | ||| || | || | ||||||||||||||| Sbjct 4359 ATCTGCGCCATCTGCATCACCTGCTCCTGGTA 4328 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 162980733953718