Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_021343.1 Length=35430 Score E Sequences producing significant alignments: (Bits) Value seq174924 123 6e-24 >seq174924 Length=7573 Score = 123 bits (136), Expect = 6e-24 Identities = 260/386 (67%), Gaps = 20/386 (5%) Strand=Plus/Minus Query 9445 GGGACGATGCCAAGCAACTGCGGCGGAACGCGATGGGCCGCGAGCGTGTCGTCGCGCGTC 9504 |||||||| || |||| |||||| || ||| | ||||| || |||| || || ||| Sbjct 3184 GGGACGATACCGAGCAGCTGCGGGTGAT-GCGCAGCGCCGCCAGTATGTCATCACGGGTC 3126 Query 9505 ACGTTCTTGATGTCGAAAAACTGGTCTTTCGCTGCAACCTCCGAAATCGGGATCAGTTGG 9564 ||| |||||| || |||| || || || ||||| || || || ||||| || Sbjct 3125 ACGCGCTTGATCCCGGTGAACTCATCCTTTGCGGCAACTTCGCTGATAGGAATCAGCTGC 3066 Query 9565 ACCGCGCCTTTTTTCGCCGCCGCTGTTTCGCGCGGCCGAGTGCAGAAACAGGTTCCGGAA 9624 | | || | || || || || || |||||||| | |||||| ||||| Sbjct 3065 AACCCGTCCTTGTT-------GCCATT------GGGCGAGTGCACGAGCAGGTTGCGGAA 3019 Query 9625 ATTACCGATGCCCTTCGAGTCGCGTAACGCCTTCCGGATCGCGTCTACGTC---GTCCGG 9681 ||| || || |||||| || | ||||| || | ||||| ||||| | || Sbjct 3018 ATTGCCTGGCCCACGCGAGTCTCGCAGCGCCTCACGCAAGGCGTCCACGTCCATGCCC-- 2961 Query 9682 GTCCATGTTCGGGTCGTTGAGGTACAGGATGAACCCGGCGTGCGAGCCGTTCGCGTAGTA 9741 ||| | ||||||| | | ||| ||||||||||||| ||||||||| | | |||||| Sbjct 2960 -TCCGGCTGCGGGTCGGTCATGTAATGGATGAACCCGGCATGCGAGCCGCTTGAGTAGTA 2902 Query 9742 GCGGCGCCGGAACAGGGTGGCGGACTCGTTCAACCACGCGGATTGCAACGATGCGATGTA 9801 ||||| ||||||| || || || ||||| | | ||| || |||| | || | | Sbjct 2901 CCGGCGACGGAACAACGTTGCCGATTCGTTGAGCAGCGCCGACTGCACCACGGCCAACCA 2842 Query 9802 CTCGGGCATCCCGTACACCTCCTGAT 9827 || |||||||| || | ||||||| Sbjct 2841 TTCCGGCATCCCATAGATTTCCTGAT 2816 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 113015814104704