Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13]
177,401 sequences; 1,960,317,893 total letters
Query= NC_021343.1
Length=35430
Score E
Sequences producing significant alignments: (Bits) Value
seq174924 123 6e-24
>seq174924
Length=7573
Score = 123 bits (136), Expect = 6e-24
Identities = 260/386 (67%), Gaps = 20/386 (5%)
Strand=Plus/Minus
Query 9445 GGGACGATGCCAAGCAACTGCGGCGGAACGCGATGGGCCGCGAGCGTGTCGTCGCGCGTC 9504
|||||||| || |||| |||||| || ||| | ||||| || |||| || || |||
Sbjct 3184 GGGACGATACCGAGCAGCTGCGGGTGAT-GCGCAGCGCCGCCAGTATGTCATCACGGGTC 3126
Query 9505 ACGTTCTTGATGTCGAAAAACTGGTCTTTCGCTGCAACCTCCGAAATCGGGATCAGTTGG 9564
||| |||||| || |||| || || || ||||| || || || ||||| ||
Sbjct 3125 ACGCGCTTGATCCCGGTGAACTCATCCTTTGCGGCAACTTCGCTGATAGGAATCAGCTGC 3066
Query 9565 ACCGCGCCTTTTTTCGCCGCCGCTGTTTCGCGCGGCCGAGTGCAGAAACAGGTTCCGGAA 9624
| | || | || || || || || |||||||| | |||||| |||||
Sbjct 3065 AACCCGTCCTTGTT-------GCCATT------GGGCGAGTGCACGAGCAGGTTGCGGAA 3019
Query 9625 ATTACCGATGCCCTTCGAGTCGCGTAACGCCTTCCGGATCGCGTCTACGTC---GTCCGG 9681
||| || || |||||| || | ||||| || | ||||| ||||| | ||
Sbjct 3018 ATTGCCTGGCCCACGCGAGTCTCGCAGCGCCTCACGCAAGGCGTCCACGTCCATGCCC-- 2961
Query 9682 GTCCATGTTCGGGTCGTTGAGGTACAGGATGAACCCGGCGTGCGAGCCGTTCGCGTAGTA 9741
||| | ||||||| | | ||| ||||||||||||| ||||||||| | | ||||||
Sbjct 2960 -TCCGGCTGCGGGTCGGTCATGTAATGGATGAACCCGGCATGCGAGCCGCTTGAGTAGTA 2902
Query 9742 GCGGCGCCGGAACAGGGTGGCGGACTCGTTCAACCACGCGGATTGCAACGATGCGATGTA 9801
||||| ||||||| || || || ||||| | | ||| || |||| | || | |
Sbjct 2901 CCGGCGACGGAACAACGTTGCCGATTCGTTGAGCAGCGCCGACTGCACCACGGCCAACCA 2842
Query 9802 CTCGGGCATCCCGTACACCTCCTGAT 9827
|| |||||||| || | |||||||
Sbjct 2841 TTCCGGCATCCCATAGATTTCCTGAT 2816
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 113015814104704
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |