Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_021347.1 Length=142563 Score E Sequences producing significant alignments: (Bits) Value seq134661 105 6e-18 >seq134661 Length=10369 Score = 105 bits (116), Expect = 6e-18 Identities = 233/346 (67%), Gaps = 5/346 (1%) Strand=Plus/Plus Query 104979 CGCGAGAAGTACTGGGCGCGTGTGGAGATGGAGGTCCGCACCATCACCAGCAAGAACTTC 105038 |||||| |||||| | ||| | || | ||| || |||||||| || | | ||| Sbjct 3200 CGCGAGGAGTACTTCGAGCGCCTCGAATTCGAGCTCGACACCATCATCAAGATGGGTTTC 3259 Query 105039 GCCGGGTACTTCAACGTCGTCGCCGACTACACCAAGTGGGCTAAGGACC---GCATGCTC 105095 |||| |||||| |||| ||||||| || | |||||| ||| ||| |||| | Sbjct 3260 CCCGGCTACTTCCTGATCGTGGCCGACTTCATCCAGTGGGGCAAGAACCAGGGCATCCCG 3319 Query 105096 GTCGGTCCCGGCCGTGGTTCGGCCGGTGGCTCGCTCGTCTCGTACCTGATGGACATCACC 105155 |||| || ||||||||||| | | || ||||| || ||| | || | |||||| Sbjct 3320 ATCGGCCCGGGCCGTGGTTCTGGTGCCGGTTCGCTGGTGGCGTGGGCGCTGAAGATCACC 3379 Query 105156 GAGCTCGACCCGATCAAGTACGACCTGATGTTCGAGCGGTTCATCTCGCCGGAGCGGAAG 105215 || || || ||| | ||| ||||| |||||||||| ||| | ||||| || | Sbjct 3380 GACCTGGATCCGCTGCCCTACAACCTGCTGTTCGAGCGCTTCCTGAATCCGGAACGCGTG 3439 Query 105216 AACTTCCCCGACATCGATCTCGACTTCCCGCA-GAAGCGTCGCGGCGAGGTCGTCGACTA 105274 | |||||| |||| |||| || | ||| | | || |||| ||| || ||||||| Sbjct 3440 TCGATGCCCGACTTCGACATCGA-TTTCTGCATGGACCGCCGCGACGAAGTGATCGACTA 3498 Query 105275 CATCGCCGACCGCTACGGCCACGACTGCGTCTGCTCGATCGGCACC 105320 | |||| | ||||| | ||| ||||| || |||| |||| Sbjct 3499 CGTCGCGCGCAAATACGGGCGCGAACGCGTCAGCCAGATCATCACC 3544 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 455062251091080