Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_022096.1 Length=258139 Score E Sequences producing significant alignments: (Bits) Value seq140315 188 1e-42 seq96266 118 2e-21 >seq140315 Length=18209 Score = 188 bits (208), Expect = 1e-42 Identities = 244/328 (74%), Gaps = 12/328 (4%) Strand=Plus/Minus Query 35595 TCCAGAGTCACATGACCTTCCCACTCAGGTTCCAGCGGCGTCACGTTGACGATGATACCA 35654 ||||| |||||||| ||||||||||| || || ||||| || |||||||||||||| || Sbjct 18209 TCCAGGGTCACATGGCCTTCCCACTCCGGCTCGAGCGGAGTGACGTTGACGATGATGCCG 18150 Query 35655 CAGCGCGCGTAGGTGCTCTTACCCAAACACACCACGAGGACGTTGCGCGGAATGCGGAAG 35714 || ||||||||||||||||| |||| |||||||||||| || ||||||||||||||| Sbjct 18149 CAACGCGCGTAGGTGCTCTTGCCCAGGCACACCACGAGGGTGTCGCGCGGAATGCGGAAA 18090 Query 35715 TATTCGACCGTGCGTGCCAGAGCGAAGCTGTTCGGCGGAATCA-GGATGCTGTCAGCCTT 35773 || || || || || ||||| ||||||||||| ||||| || | | || | ||| || | Sbjct 18089 TACTCCACGGTACGCGCCAGCGCGAAGCTGTTGGGCGGGATGATGCATTC-GTCGGCGGT 18031 Query 35774 AA--CCGGCTGCAG--GCACTTGGGATCGAAGTTCTTCGGATCAACCACTGCGCTGTTGA 35829 | || | | || || | | |||||||| |||||| || || | | ||||| Sbjct 18030 GATGTCGAC-GAAGCTGCCC---GAATCGAAGTGCTTCGGGTCCACGATGGTCGAGTTGA 17975 Query 35830 TGTTGGTGAAGACTTCCCACTCATCGGCAGC-ACGCACGTCATAACCATACGACGAGTTG 35888 |||||||||| || | |||| || ||| ||||||||| ||||| || ||| | Sbjct 17974 TGTTGGTGAACACCTTGAACTC-GCGCGAGCAACGCACGTCGTAACCGTAGCTGGAGGTA 17916 Query 35889 CCGTACGAGATAACGTGCTGACCGTCGA 35916 ||||| || | | |||| |||| || Sbjct 17915 CCGTAGCTGACGATGCGCTGGCCGTTGA 17888 >seq96266 Length=5004 Score = 118 bits (130), Expect = 2e-21 Identities = 118/152 (78%), Gaps = 6/152 (4%) Strand=Plus/Minus Query 35452 GGGTCACACCCGTCTGGCCCTGGTATTTACCGCCGCGATCCTTGTACGAGATTTCGCAG- 35510 |||| || ||||||||||||||||| || || || || |||||||| || |||||||| Sbjct 157 GGGTGACGCCCGTCTGGCCCTGGTACTTGCCACCACGGTCCTTGTAGGACGTTTCGCAGA 98 Query 35511 --TCCTCGTCACTCTC---GAAAAACAGCATCTGCGCCACACCTTCGTTCGCGTACACAC 35565 || ||| | | | ||| ||||||||||| ||||| |||||||| ||||| | | Sbjct 97 TATCATCGGCCGCCGCCTGGAAGAACAGCATCTGGGCCACGCCTTCGTTGGCGTAGATGC 38 Query 35566 GCGCCGGCAGGTTGGTAGTGTTGCTGAACTCC 35597 |||||||||| || ||||||||||||||| Sbjct 37 GCGCCGGCAGCGGCGTGGTGTTGCTGAACTCC 6 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 824085319172040