Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13]
177,401 sequences; 1,960,317,893 total letters
Query= NC_022096.1
Length=258139
Score E
Sequences producing significant alignments: (Bits) Value
seq140315 188 1e-42
seq96266 118 2e-21
>seq140315
Length=18209
Score = 188 bits (208), Expect = 1e-42
Identities = 244/328 (74%), Gaps = 12/328 (4%)
Strand=Plus/Minus
Query 35595 TCCAGAGTCACATGACCTTCCCACTCAGGTTCCAGCGGCGTCACGTTGACGATGATACCA 35654
||||| |||||||| ||||||||||| || || ||||| || |||||||||||||| ||
Sbjct 18209 TCCAGGGTCACATGGCCTTCCCACTCCGGCTCGAGCGGAGTGACGTTGACGATGATGCCG 18150
Query 35655 CAGCGCGCGTAGGTGCTCTTACCCAAACACACCACGAGGACGTTGCGCGGAATGCGGAAG 35714
|| ||||||||||||||||| |||| |||||||||||| || |||||||||||||||
Sbjct 18149 CAACGCGCGTAGGTGCTCTTGCCCAGGCACACCACGAGGGTGTCGCGCGGAATGCGGAAA 18090
Query 35715 TATTCGACCGTGCGTGCCAGAGCGAAGCTGTTCGGCGGAATCA-GGATGCTGTCAGCCTT 35773
|| || || || || ||||| ||||||||||| ||||| || | | || | ||| || |
Sbjct 18089 TACTCCACGGTACGCGCCAGCGCGAAGCTGTTGGGCGGGATGATGCATTC-GTCGGCGGT 18031
Query 35774 AA--CCGGCTGCAG--GCACTTGGGATCGAAGTTCTTCGGATCAACCACTGCGCTGTTGA 35829
| || | | || || | | |||||||| |||||| || || | | |||||
Sbjct 18030 GATGTCGAC-GAAGCTGCCC---GAATCGAAGTGCTTCGGGTCCACGATGGTCGAGTTGA 17975
Query 35830 TGTTGGTGAAGACTTCCCACTCATCGGCAGC-ACGCACGTCATAACCATACGACGAGTTG 35888
|||||||||| || | |||| || ||| ||||||||| ||||| || ||| |
Sbjct 17974 TGTTGGTGAACACCTTGAACTC-GCGCGAGCAACGCACGTCGTAACCGTAGCTGGAGGTA 17916
Query 35889 CCGTACGAGATAACGTGCTGACCGTCGA 35916
||||| || | | |||| |||| ||
Sbjct 17915 CCGTAGCTGACGATGCGCTGGCCGTTGA 17888
>seq96266
Length=5004
Score = 118 bits (130), Expect = 2e-21
Identities = 118/152 (78%), Gaps = 6/152 (4%)
Strand=Plus/Minus
Query 35452 GGGTCACACCCGTCTGGCCCTGGTATTTACCGCCGCGATCCTTGTACGAGATTTCGCAG- 35510
|||| || ||||||||||||||||| || || || || |||||||| || ||||||||
Sbjct 157 GGGTGACGCCCGTCTGGCCCTGGTACTTGCCACCACGGTCCTTGTAGGACGTTTCGCAGA 98
Query 35511 --TCCTCGTCACTCTC---GAAAAACAGCATCTGCGCCACACCTTCGTTCGCGTACACAC 35565
|| ||| | | | ||| ||||||||||| ||||| |||||||| ||||| | |
Sbjct 97 TATCATCGGCCGCCGCCTGGAAGAACAGCATCTGGGCCACGCCTTCGTTGGCGTAGATGC 38
Query 35566 GCGCCGGCAGGTTGGTAGTGTTGCTGAACTCC 35597
|||||||||| || |||||||||||||||
Sbjct 37 GCGCCGGCAGCGGCGTGGTGTTGCTGAACTCC 6
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 824085319172040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |