Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13]
177,401 sequences; 1,960,317,893 total letters
Query= NC_023006.1
Length=43564
Score E
Sequences producing significant alignments: (Bits) Value
seq166368 141 3e-29
seq177183 109 2e-19
seq176166 86.0 2e-12
seq176782 80.6 7e-11
>seq166368
Length=2936
Score = 141 bits (156), Expect = 3e-29
Identities = 247/355 (70%), Gaps = 16/355 (5%)
Strand=Plus/Plus
Query 37166 TGCTGGTTACCCGCAAAGGTGCTGTTCGGGCCCGCGAGGGCGACCTGGGCATCATCCCTG 37225
||||||| |||||||| ||||| || | || ||| ||||||| |||||||||||||| |
Sbjct 338 TGCTGGTCACCCGCAAGGGTGCGGTCAGTGCACGCCAGGGCGAGCTGGGCATCATCCCCG 397
Query 37226 GCTCGATGGG--TGCGAAGTCATTCATCGTTCGCGGCAAGGGAAATTCCGAATCGTTCTG 37283
|| ||||| ||| || | |||||| || |||||||| ||| | || |||
Sbjct 398 GCAGCATGGGCACGCGCAG--CTACATCGTGCGTGGCAAGGGCAATGCAGACAGTTTCCA 455
Query 37284 CTCTTGCAGCCACGGTGCCGGTCGAATGATGAGCCGGGCCGAAGCAAAACGC---CGGTT 37340
| ||||||||||| || || || |||||||||| | | || |||| ||| |
Sbjct 456 CAGCTGCAGCCACGGCGCAGGCCGGGTGATGAGCCGCGGCACGGC---ACGCGAGCGGAT 512
Query 37341 CAC---AGTCGAGGATCATGAGGCGGCCACCAAAGGTATCGAGTGCCGCAAAGATGCCGA 37397
||| | | || | | |||||| || | | | | || |||||||| || ||
Sbjct 513 CACCCTGGCCCAGCACCGCGAGGCGACCGCGCA---TGTGGAATGCCGCAAGGACAGCGG 569
Query 37398 AGTGATCGACGAGACGCCAGCGGCTTACAAGGACATCGATGCGGTCATGGCCGCGCAATC 37457
||| | || || |||| ||||| |||||| ||||| | || |||||||| ||
Sbjct 570 CGTGCTGGATGAATCGCCGGCGGCGTACAAGTCGATCGACGATGTGATGGCCGCCCAGCT 629
Query 37458 CGCCCTGGTGGACATCGTGCACACGCTGCGCCAAGTCGTTTGCGTGAAGGGTTGA 37512
|| |||||||||| | || ||||| |||||||| || | ||||| || || |||
Sbjct 630 CGACCTGGTGGACGTGGTCCACACACTGCGCCAGGTGCTGTGCGTCAAAGGCTGA 684
>seq177183
Length=17048
Score = 109 bits (120), Expect = 2e-19
Identities = 152/210 (72%), Gaps = 5/210 (2%)
Strand=Plus/Plus
Query 23536 CTTCCCTTGCGCAGATACTCGCCGGCAATCTCGGCGACCTTGCCGAAGAACACGACGCGG 23595
|| ||||||||||| ||||||||||| ||||| ||| ||||||||||||||| ||||||
Sbjct 12285 CTGCCCTTGCGCAGGTACTCGCCGGCGATCTCACCGAGCTTGCCGAAGAACACCACGCGG 12344
Query 23596 TGCCATTCGGTCTTTTCCTTGCGCTCGCCGGTCTGCTTGTCCTTCCAGGTTTCCGACGTG 23655
||||||||||| ||||| ||| | | | ||||||||| | | | |||
Sbjct 12345 TGCCATTCGGTGCGTTCCT---GCTGGTTGCCATCCTTGTCCTTGCGGACGCTGGTGGTG 12401
Query 23656 GCCAGGCTGATGTTGCAGA-CGGCATCGCCGTTTTGCAGGTAGCGCACTTCCGGGTCATT 23714
|||||||||||| | || || ||| |||| | || ||| ||| |||||||| ||
Sbjct 12402 GCCAGGCTGATGCGGGTGATCGCCAT-GCCGCTCTGGGTGTACTTCACGTCCGGGTCGTT 12460
Query 23715 ACCCAGGCGGCCAATCAGGTCTACTTTGTT 23744
|| || ||| | |||| ||||| ||
Sbjct 12461 GCCGAGATTGCCGACCAGGATGACTTTATT 12490
>seq176166
Length=10187
Score = 86.0 bits (94), Expect = 2e-12
Identities = 64/75 (85%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 21062 ATGGCGACCCCGACAGGATTCGAACCTGTGACCGTTCGCTTAGAAGGCGAATGCTCTATC 21121
|||||| |||||||||| |||||||||| |||| ||||||||||| |||||||||
Sbjct 4925 ATGGCGCGCCCGACAGGAATCGAACCTGTAACCGCCGGCTTAGAAGGCCGGTGCTCTATC 4984
Query 21122 CAGCTGAGCTACGGG 21136
||| |||||||||||
Sbjct 4985 CAGTTGAGCTACGGG 4999
>seq176782
Length=12817
Score = 80.6 bits (88), Expect = 7e-11
Identities = 65/79 (82%), Gaps = 0/79 (0%)
Strand=Plus/Plus
Query 21061 GATGGCGACCCCGACAGGATTCGAACCTGTGACCGTTCGCTTAGAAGGCGAATGCTCTAT 21120
||||| ||||||| | ||||||||| | |||| | | ||||| ||| | | |||||||
Sbjct 2654 GATGGTGACCCCGGCCCGATTCGAACGGGCGACCTTCCCCTTAGGAGGGGGACGCTCTAT 2713
Query 21121 CCAGCTGAGCTACGGGGCC 21139
|||||||||||||||||||
Sbjct 2714 CCAGCTGAGCTACGGGGCC 2732
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 138989780874812
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |