Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_023006.1 Length=43564 Score E Sequences producing significant alignments: (Bits) Value seq166368 141 3e-29 seq177183 109 2e-19 seq176166 86.0 2e-12 seq176782 80.6 7e-11 >seq166368 Length=2936 Score = 141 bits (156), Expect = 3e-29 Identities = 247/355 (70%), Gaps = 16/355 (5%) Strand=Plus/Plus Query 37166 TGCTGGTTACCCGCAAAGGTGCTGTTCGGGCCCGCGAGGGCGACCTGGGCATCATCCCTG 37225 ||||||| |||||||| ||||| || | || ||| ||||||| |||||||||||||| | Sbjct 338 TGCTGGTCACCCGCAAGGGTGCGGTCAGTGCACGCCAGGGCGAGCTGGGCATCATCCCCG 397 Query 37226 GCTCGATGGG--TGCGAAGTCATTCATCGTTCGCGGCAAGGGAAATTCCGAATCGTTCTG 37283 || ||||| ||| || | |||||| || |||||||| ||| | || ||| Sbjct 398 GCAGCATGGGCACGCGCAG--CTACATCGTGCGTGGCAAGGGCAATGCAGACAGTTTCCA 455 Query 37284 CTCTTGCAGCCACGGTGCCGGTCGAATGATGAGCCGGGCCGAAGCAAAACGC---CGGTT 37340 | ||||||||||| || || || |||||||||| | | || |||| ||| | Sbjct 456 CAGCTGCAGCCACGGCGCAGGCCGGGTGATGAGCCGCGGCACGGC---ACGCGAGCGGAT 512 Query 37341 CAC---AGTCGAGGATCATGAGGCGGCCACCAAAGGTATCGAGTGCCGCAAAGATGCCGA 37397 ||| | | || | | |||||| || | | | | || |||||||| || || Sbjct 513 CACCCTGGCCCAGCACCGCGAGGCGACCGCGCA---TGTGGAATGCCGCAAGGACAGCGG 569 Query 37398 AGTGATCGACGAGACGCCAGCGGCTTACAAGGACATCGATGCGGTCATGGCCGCGCAATC 37457 ||| | || || |||| ||||| |||||| ||||| | || |||||||| || Sbjct 570 CGTGCTGGATGAATCGCCGGCGGCGTACAAGTCGATCGACGATGTGATGGCCGCCCAGCT 629 Query 37458 CGCCCTGGTGGACATCGTGCACACGCTGCGCCAAGTCGTTTGCGTGAAGGGTTGA 37512 || |||||||||| | || ||||| |||||||| || | ||||| || || ||| Sbjct 630 CGACCTGGTGGACGTGGTCCACACACTGCGCCAGGTGCTGTGCGTCAAAGGCTGA 684 >seq177183 Length=17048 Score = 109 bits (120), Expect = 2e-19 Identities = 152/210 (72%), Gaps = 5/210 (2%) Strand=Plus/Plus Query 23536 CTTCCCTTGCGCAGATACTCGCCGGCAATCTCGGCGACCTTGCCGAAGAACACGACGCGG 23595 || ||||||||||| ||||||||||| ||||| ||| ||||||||||||||| |||||| Sbjct 12285 CTGCCCTTGCGCAGGTACTCGCCGGCGATCTCACCGAGCTTGCCGAAGAACACCACGCGG 12344 Query 23596 TGCCATTCGGTCTTTTCCTTGCGCTCGCCGGTCTGCTTGTCCTTCCAGGTTTCCGACGTG 23655 ||||||||||| ||||| ||| | | | ||||||||| | | | ||| Sbjct 12345 TGCCATTCGGTGCGTTCCT---GCTGGTTGCCATCCTTGTCCTTGCGGACGCTGGTGGTG 12401 Query 23656 GCCAGGCTGATGTTGCAGA-CGGCATCGCCGTTTTGCAGGTAGCGCACTTCCGGGTCATT 23714 |||||||||||| | || || ||| |||| | || ||| ||| |||||||| || Sbjct 12402 GCCAGGCTGATGCGGGTGATCGCCAT-GCCGCTCTGGGTGTACTTCACGTCCGGGTCGTT 12460 Query 23715 ACCCAGGCGGCCAATCAGGTCTACTTTGTT 23744 || || ||| | |||| ||||| || Sbjct 12461 GCCGAGATTGCCGACCAGGATGACTTTATT 12490 >seq176166 Length=10187 Score = 86.0 bits (94), Expect = 2e-12 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 21062 ATGGCGACCCCGACAGGATTCGAACCTGTGACCGTTCGCTTAGAAGGCGAATGCTCTATC 21121 |||||| |||||||||| |||||||||| |||| ||||||||||| ||||||||| Sbjct 4925 ATGGCGCGCCCGACAGGAATCGAACCTGTAACCGCCGGCTTAGAAGGCCGGTGCTCTATC 4984 Query 21122 CAGCTGAGCTACGGG 21136 ||| ||||||||||| Sbjct 4985 CAGTTGAGCTACGGG 4999 >seq176782 Length=12817 Score = 80.6 bits (88), Expect = 7e-11 Identities = 65/79 (82%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 21061 GATGGCGACCCCGACAGGATTCGAACCTGTGACCGTTCGCTTAGAAGGCGAATGCTCTAT 21120 ||||| ||||||| | ||||||||| | |||| | | ||||| ||| | | ||||||| Sbjct 2654 GATGGTGACCCCGGCCCGATTCGAACGGGCGACCTTCCCCTTAGGAGGGGGACGCTCTAT 2713 Query 21121 CCAGCTGAGCTACGGGGCC 21139 ||||||||||||||||||| Sbjct 2714 CCAGCTGAGCTACGGGGCC 2732 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 138989780874812