Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq161317 96.9 3e-15 seq104553 96.9 3e-15 seq79216 95.1 9e-15 seq174782 89.7 4e-13 seq122414 86.0 5e-12 seq34526 86.0 5e-12 seq79482 82.4 6e-11 >seq161317 Length=2104 Score = 96.9 bits (106), Expect = 3e-15 Identities = 151/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || ||||| || || || ||||| || |||||||| || || | || || || Sbjct 1317 ACGGAGAACCAAGTGGAGAGTAGATTCCTTCTGAATGTTGTAGTCGGAAAGAGTTCGGCC 1376 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || ||||| |||||||| | || | || || ||||| || ||||||||||| || Sbjct 1377 ATCTTCAAGTTGCTTGCCAGCGAAGATGAGTCGCTGTTGATCGGGAGGAATACCCTCCTT 1436 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 ||| || | || || ||| | || | || || || || ||||| ||||| || Sbjct 1437 GTCCTGGATCTTGCTCTTCACATTATCAATGGTATCGGATGACTCGACTTCCAGAGTAAT 1496 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || ||||| | ||| || || || || ||||| Sbjct 1497 GGTCTTTCCAGTGAGGGTCTTGACGAAGATTTGCAT 1532 >seq104553 Length=43841 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 29574 CAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATC 29633 || ||| | |||||| || || || ||||||||||| || || | | || || ||| Sbjct 35481 CAACACAAGATGAAGAGTAGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGCCCATC 35540 Query 29634 ATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTC 29693 || ||||| ||||||||| | |||| | |||||||||| || ||||| || || || || Sbjct 35541 TTCCAGTTGCTTGCCAGCAAAGATCAGTTTTTGCTGATCAGGAGGAATTCCTTCCTTATC 35600 Query 29694 TTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGT 29753 || | | | || ||| |||||| || || || |||| | || |||| || || Sbjct 35601 CTGGATCTCGGGCTTCACATTTTCTATTGTATCCGAGGGTTCAGCCTCGAGAGCGATGGT 35660 Query 29754 TTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || | | |||| | || || |||||||| Sbjct 35661 CTTCCCTATAAGGGTTGTCACGAAAATCTGCAT 35693 >seq79216 Length=33065 Score = 95.1 bits (104), Expect = 9e-15 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || |||| ||||| |||| || || ||||| ||||| || ||||| || || | | Sbjct 3635 CCACCTCTCAGGCGCAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAA 3694 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||||| ||| || || || ||||| ||| | || | || ||||| || || || Sbjct 3695 AGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCTGGGGGG 3754 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || || || || ||||| | || ||| ||| | || | ||||| | || || Sbjct 3755 ATGCCTTCCTTATCTTGGATCTTGGCTTTCACATTCTCAATGGTGTCGCTGGGCTCCACC 3814 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 || || || || || ||||| || | ||| || ||||| ||||||||||| Sbjct 3815 TCCAGGGTGATGGTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCATTTT 3864 >seq174782 Length=7384 Score = 89.7 bits (98), Expect = 4e-13 Identities = 118/164 (72%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 29583 ATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTG 29642 |||||| || || || ||||||||||| || || | | || || ||| || ||||| Sbjct 136 ATGAAGAGTAGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGTCCATCTTCCAGTTG 195 Query 29643 TTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTT 29702 || |||||| | |||| |||||||||||| || ||||| || || || || || | || Sbjct 196 CTTTCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATCTT 255 Query 29703 TTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAG 29746 || ||| |||||| || || || ||||| || || |||| Sbjct 256 GGCCTTCACATTTTCTATTGTATCCGAGAGTTCAACCTCGAGAG 299 >seq122414 Length=20378 Score = 86.0 bits (94), Expect = 5e-12 Identities = 115/159 (72%), Gaps = 1/159 (1%) Strand=Plus/Minus Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || ||||| ||||||||| | ||||||||||||||||| || ||||| | || || Sbjct 18973 ATCTTCCAGTTGCTTGCCAGCAAAGATCAATCTTTGCTGATCAGGAGGAATTCTTTCCTT 18914 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 | || || || | | ||| |||||| || || || ||| | |||||||| || Sbjct 18913 ATTCTG-GATCTTGGCCTTACATTTTCTATTGTCTCTGAGGATTCAGCCTCAAGAGTGAT 18855 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 || || || | ||| |||| || || |||||||| || Sbjct 18854 GGTCTTCCCCATAAAGATTTTGACCAAAATCTGCATCTT 18816 >seq34526 Length=20474 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||||||||| |||| ||||| || || || ||||| |||||||| | || | Sbjct 15123 CCTCCCCTCAAGTGCAGGACCAAGAACAGAGTAGACTCTTTCTGAATGTTGTGGTCAGAC 15182 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||| | ||| || || ||||| |||||| | ||||| || ||||| || || | Sbjct 15183 AGGGTATGCCCATCTTCCAGCTGTTTCCCAGCAAAGATCAACCTCTGCTGGTCAGGGGAG 15242 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || ||||| |||||||| | || |||||| | || | |||||| | || || Sbjct 15243 ATGCCCTCCTTGTCTTGGATCTTGGCCTTGACATTCTCAATGGTGTCATGGGGCTCAACC 15302 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || |||| || || || | || ||| | || || || |||| ||| Sbjct 15303 TCCAGAGGGATGGTCTTACAAGACAAGATCTTCACGAAGATCTTCAT 15349 >seq79482 Length=29390 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/227 (68%), Gaps = 1/227 (0%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||||||||| ||||| |||| || || || || ||||| || ||||| || | | Sbjct 9773 CCTCCCCTCAAGCGCAGGACCAGGTGCAGAGTAGACTCTTTCTGGATGTTGTACTTGGAC 9714 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | | || | ||| || || || || ||||| | |||| | ||||| || || || Sbjct 9713 AGGATGTGCCCATCTTCCAGCTGCTTCCCAGCGAAGATCAGCCGCTGCTGGTCAGG-GGG 9655 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 | ||||| |||||||||| || |||||| || | |||||| | | || Sbjct 9654 GTGCCCTCCTTGTCTTGTATCTTGGCCTTGACATCCTCAATGGTGTCACTGGGCTTGACC 9595 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || || || |||||||| | ||| || || || |||||||| Sbjct 9594 TCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 9548 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 384386327318541