Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13]
177,401 sequences; 1,960,317,893 total letters
Query= NC_023442.1
Length=120420
Score E
Sequences producing significant alignments: (Bits) Value
seq161317 96.9 3e-15
seq104553 96.9 3e-15
seq79216 95.1 9e-15
seq174782 89.7 4e-13
seq122414 86.0 5e-12
seq34526 86.0 5e-12
seq79482 82.4 6e-11
>seq161317
Length=2104
Score = 96.9 bits (106), Expect = 3e-15
Identities = 151/216 (70%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630
||| || ||||| || || || ||||| || |||||||| || || | || || ||
Sbjct 1317 ACGGAGAACCAAGTGGAGAGTAGATTCCTTCTGAATGTTGTAGTCGGAAAGAGTTCGGCC 1376
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
||| || ||||| |||||||| | || | || || ||||| || ||||||||||| ||
Sbjct 1377 ATCTTCAAGTTGCTTGCCAGCGAAGATGAGTCGCTGTTGATCGGGAGGAATACCCTCCTT 1436
Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750
||| || | || || ||| | || | || || || || ||||| ||||| ||
Sbjct 1437 GTCCTGGATCTTGCTCTTCACATTATCAATGGTATCGGATGACTCGACTTCCAGAGTAAT 1496
Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| || ||||| | ||| || || || || |||||
Sbjct 1497 GGTCTTTCCAGTGAGGGTCTTGACGAAGATTTGCAT 1532
>seq104553
Length=43841
Score = 96.9 bits (106), Expect = 3e-15
Identities = 149/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 29574 CAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATC 29633
|| ||| | |||||| || || || ||||||||||| || || | | || || |||
Sbjct 35481 CAACACAAGATGAAGAGTAGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGCCCATC 35540
Query 29634 ATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTC 29693
|| ||||| ||||||||| | |||| | |||||||||| || ||||| || || || ||
Sbjct 35541 TTCCAGTTGCTTGCCAGCAAAGATCAGTTTTTGCTGATCAGGAGGAATTCCTTCCTTATC 35600
Query 29694 TTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGT 29753
|| | | | || ||| |||||| || || || |||| | || |||| || ||
Sbjct 35601 CTGGATCTCGGGCTTCACATTTTCTATTGTATCCGAGGGTTCAGCCTCGAGAGCGATGGT 35660
Query 29754 TTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| || | | |||| | || || ||||||||
Sbjct 35661 CTTCCCTATAAGGGTTGTCACGAAAATCTGCAT 35693
>seq79216
Length=33065
Score = 95.1 bits (104), Expect = 9e-15
Identities = 159/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| || |||| ||||| |||| || || ||||| ||||| || ||||| || || | |
Sbjct 3635 CCACCTCTCAGGCGCAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAA 3694
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| ||||| ||| || || || ||||| ||| | || | || ||||| || || ||
Sbjct 3695 AGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCTGGGGGG 3754
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
|| || || || ||||| | || ||| ||| | || | ||||| | || ||
Sbjct 3755 ATGCCTTCCTTATCTTGGATCTTGGCTTTCACATTCTCAATGGTGTCGCTGGGCTCCACC 3814
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789
|| || || || || ||||| || | ||| || ||||| |||||||||||
Sbjct 3815 TCCAGGGTGATGGTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCATTTT 3864
>seq174782
Length=7384
Score = 89.7 bits (98), Expect = 4e-13
Identities = 118/164 (72%), Gaps = 0/164 (0%)
Strand=Plus/Plus
Query 29583 ATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTG 29642
|||||| || || || ||||||||||| || || | | || || ||| || |||||
Sbjct 136 ATGAAGAGTAGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGTCCATCTTCCAGTTG 195
Query 29643 TTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTT 29702
|| |||||| | |||| |||||||||||| || ||||| || || || || || | ||
Sbjct 196 CTTTCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATCTT 255
Query 29703 TTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAG 29746
|| ||| |||||| || || || ||||| || || ||||
Sbjct 256 GGCCTTCACATTTTCTATTGTATCCGAGAGTTCAACCTCGAGAG 299
>seq122414
Length=20378
Score = 86.0 bits (94), Expect = 5e-12
Identities = 115/159 (72%), Gaps = 1/159 (1%)
Strand=Plus/Minus
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
||| || ||||| ||||||||| | ||||||||||||||||| || ||||| | || ||
Sbjct 18973 ATCTTCCAGTTGCTTGCCAGCAAAGATCAATCTTTGCTGATCAGGAGGAATTCTTTCCTT 18914
Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750
| || || || | | ||| |||||| || || || ||| | |||||||| ||
Sbjct 18913 ATTCTG-GATCTTGGCCTTACATTTTCTATTGTCTCTGAGGATTCAGCCTCAAGAGTGAT 18855
Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789
|| || || | ||| |||| || || |||||||| ||
Sbjct 18854 GGTCTTCCCCATAAAGATTTTGACCAAAATCTGCATCTT 18816
>seq34526
Length=20474
Score = 86.0 bits (94), Expect = 5e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
||||||||||| |||| ||||| || || || ||||| |||||||| | || |
Sbjct 15123 CCTCCCCTCAAGTGCAGGACCAAGAACAGAGTAGACTCTTTCTGAATGTTGTGGTCAGAC 15182
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| ||| | ||| || || ||||| |||||| | ||||| || ||||| || || |
Sbjct 15183 AGGGTATGCCCATCTTCCAGCTGTTTCCCAGCAAAGATCAACCTCTGCTGGTCAGGGGAG 15242
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
|| ||||| |||||||| | || |||||| | || | |||||| | || ||
Sbjct 15243 ATGCCCTCCTTGTCTTGGATCTTGGCCTTGACATTCTCAATGGTGTCATGGGGCTCAACC 15302
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| |||| || || || | || ||| | || || || |||| |||
Sbjct 15303 TCCAGAGGGATGGTCTTACAAGACAAGATCTTCACGAAGATCTTCAT 15349
>seq79482
Length=29390
Score = 82.4 bits (90), Expect = 6e-11
Identities = 155/227 (68%), Gaps = 1/227 (0%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
||||||||||| ||||| |||| || || || || ||||| || ||||| || | |
Sbjct 9773 CCTCCCCTCAAGCGCAGGACCAGGTGCAGAGTAGACTCTTTCTGGATGTTGTACTTGGAC 9714
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| | || | ||| || || || || ||||| | |||| | ||||| || || ||
Sbjct 9713 AGGATGTGCCCATCTTCCAGCTGCTTCCCAGCGAAGATCAGCCGCTGCTGGTCAGG-GGG 9655
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
| ||||| |||||||||| || |||||| || | |||||| | | ||
Sbjct 9654 GTGCCCTCCTTGTCTTGTATCTTGGCCTTGACATCCTCAATGGTGTCACTGGGCTTGACC 9595
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| || || || || |||||||| | ||| || || || ||||||||
Sbjct 9594 TCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 9548
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 384386327318541
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |