Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_023575.1 Length=45550 Score E Sequences producing significant alignments: (Bits) Value seq177183 107 6e-19 >seq177183 Length=17048 Score = 107 bits (118), Expect = 6e-19 Identities = 145/197 (74%), Gaps = 9/197 (5%) Strand=Plus/Plus Query 30194 CCGACGATCTCCGCCAACTTCCCGAAGAACACCACGCGGTGCCATTCGGTGCGCTCCTGT 30253 ||| ||||||| | | ||| |||||||||||||||||||||||||||||||| ||||| Sbjct 12306 CCGGCGATCTCACCGAGCTTGCCGAAGAACACCACGCGGTGCCATTCGGTGCGTTCCTGC 12365 Query 30254 TGCTGGCCGGTCTGCTTGTCCTTCCAG-CTCTCGCTGGTGGCGAGGGTGATGTTGGTCAC 30312 || | ||| | ||||||||| | | | || | ||||||| ||| ||||| ||| | Sbjct 12366 TGGTTGCC---ATCCTTGTCCTTGCGGACGCT-GGTGGTGGCCAGGCTGATGCGGGTGAT 12421 Query 30313 CGCATTGCCG--TTGGGCATATAGCGAGTTTCCGGGTCACCACCGACGTTGCCAACCAGA 30370 ||| ||||| |||| || | | |||||||| |||| ||||| ||||| Sbjct 12422 CGCCATGCCGCTCTGGGTGTACTTCACG--TCCGGGTCGTTGCCGAGATTGCCGACCAGG 12479 Query 30371 ATGACTTTGTTAACGCC 30387 |||||||| || | ||| Sbjct 12480 ATGACTTTATTGATGCC 12496 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 145331592776144