Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13]
177,401 sequences; 1,960,317,893 total letters
Query= NC_023588.1
Length=33525
Score E
Sequences producing significant alignments: (Bits) Value
seq174924 345 9e-91
seq124024 89.7 1e-13
>seq174924
Length=7573
Score = 345 bits (382), Expect = 9e-91
Identities = 361/473 (76%), Gaps = 1/473 (0%)
Strand=Plus/Minus
Query 1938 GCTGCGTCCCGGATCGAGCCAAAGCCGCCGCTGTTCTGGGGCACGATGCCCAGCAGCTGC 1997
|| || ||||| ||||| || || || || ||||| || ||||| || |||||||||
Sbjct 3223 GCCGCATCCCGAATCGAACCGAATCCACCAGCATTCTGAGGGACGATACCGAGCAGCTGC 3164
Query 1998 GGCGGTACCCGTAACGCGGCCAGCATGTCATCGCGGGTCACGCTCTTGATGCCGGTGAAT 2057
|| | | || | ||| ||||| |||||||| |||||||||| |||||| ||||||||
Sbjct 3163 GGGTG-ATGCGCAGCGCCGCCAGTATGTCATCACGGGTCACGCGCTTGATCCCGGTGAAC 3105
Query 2058 TCATCCCTTGCCGCCACCTCACTGACCGGGATCACCTGCAGGCCGTCCTTCTTCCCGTTG 2117
|||||| |||| || || || |||| || |||| ||||| |||||||| || || |||
Sbjct 3104 TCATCCTTTGCGGCAACTTCGCTGATAGGAATCAGCTGCAACCCGTCCTTGTTGCCATTG 3045
Query 2118 GGCGAGTGAACGAACAGGTTCTTGAAATTGCCCGGCCCGCGCGACTGCCGCAGTGCGTCG 2177
|||||||| |||| |||||| ||||||||| ||||| ||||| | ||||| || ||
Sbjct 3044 GGCGAGTGCACGAGCAGGTTGCGGAAATTGCCTGGCCCACGCGAGTCTCGCAGCGCCTCA 2985
Query 2178 CGTAACGCATCCACGTCCATGCCCTCGGGTTGGGGATCGGTCATGTAGAGGATGTAGCCG 2237
|| || || ||||||||||||||||| || || || ||||||||||| ||||| | |||
Sbjct 2984 CGCAAGGCGTCCACGTCCATGCCCTCCGGCTGCGGGTCGGTCATGTAATGGATGAACCCG 2925
Query 2238 GCGTGCGAACCGTTGTTGTAATACTTCCGGCGGAAAAGCGTGGCCGACTCATTCAGCAAC 2297
|| ||||| ||| | ||| ||| || ||||| | ||| ||||| || || |||| |
Sbjct 2924 GCATGCGAGCCGCTTGAGTAGTACCGGCGACGGAACAACGTTGCCGATTCGTTGAGCAGC 2865
Query 2298 GCGGCCTGTACGGCTGGCATCCATTCCGGCAGGCCGTAGATTTCCTGATCCGCGTCCGCC 2357
|| | ||| || | | || ||||||||||| || |||||||||||||| | ||| |||
Sbjct 2864 GCCGACTGCACCACGGCCAACCATTCCGGCATCCCATAGATTTCCTGATCGGTGTCGGCC 2805
Query 2358 TCGCGCAGCTGGAACACCTCACCAGCGGGAAACTCATGCTCTACCCGTCCGGC 2410
|| ||||||||| | ||| ||| | |||||| ||||| |||| |||||
Sbjct 2804 TCACGCAGCTGGTATACCGAGCCAAGTGCAAACTCGTGCTCGACCCACCCGGC 2752
>seq124024
Length=2559
Score = 89.7 bits (98), Expect = 1e-13
Identities = 51/52 (98%), Gaps = 0/52 (0%)
Strand=Plus/Plus
Query 30738 TGGTGCCGCTTATCCGAATCGAACGGATGACCTACTGTTTACAAGATAGTTG 30789
|||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 2234 TGGTGCCGCTTATCCGAATCGAACGGATGACCTACTGTTTACAAGACAGTTG 2285
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 106932656163094
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |