Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_023588.1 Length=33525 Score E Sequences producing significant alignments: (Bits) Value seq174924 345 9e-91 seq124024 89.7 1e-13 >seq174924 Length=7573 Score = 345 bits (382), Expect = 9e-91 Identities = 361/473 (76%), Gaps = 1/473 (0%) Strand=Plus/Minus Query 1938 GCTGCGTCCCGGATCGAGCCAAAGCCGCCGCTGTTCTGGGGCACGATGCCCAGCAGCTGC 1997 || || ||||| ||||| || || || || ||||| || ||||| || ||||||||| Sbjct 3223 GCCGCATCCCGAATCGAACCGAATCCACCAGCATTCTGAGGGACGATACCGAGCAGCTGC 3164 Query 1998 GGCGGTACCCGTAACGCGGCCAGCATGTCATCGCGGGTCACGCTCTTGATGCCGGTGAAT 2057 || | | || | ||| ||||| |||||||| |||||||||| |||||| |||||||| Sbjct 3163 GGGTG-ATGCGCAGCGCCGCCAGTATGTCATCACGGGTCACGCGCTTGATCCCGGTGAAC 3105 Query 2058 TCATCCCTTGCCGCCACCTCACTGACCGGGATCACCTGCAGGCCGTCCTTCTTCCCGTTG 2117 |||||| |||| || || || |||| || |||| ||||| |||||||| || || ||| Sbjct 3104 TCATCCTTTGCGGCAACTTCGCTGATAGGAATCAGCTGCAACCCGTCCTTGTTGCCATTG 3045 Query 2118 GGCGAGTGAACGAACAGGTTCTTGAAATTGCCCGGCCCGCGCGACTGCCGCAGTGCGTCG 2177 |||||||| |||| |||||| ||||||||| ||||| ||||| | ||||| || || Sbjct 3044 GGCGAGTGCACGAGCAGGTTGCGGAAATTGCCTGGCCCACGCGAGTCTCGCAGCGCCTCA 2985 Query 2178 CGTAACGCATCCACGTCCATGCCCTCGGGTTGGGGATCGGTCATGTAGAGGATGTAGCCG 2237 || || || ||||||||||||||||| || || || ||||||||||| ||||| | ||| Sbjct 2984 CGCAAGGCGTCCACGTCCATGCCCTCCGGCTGCGGGTCGGTCATGTAATGGATGAACCCG 2925 Query 2238 GCGTGCGAACCGTTGTTGTAATACTTCCGGCGGAAAAGCGTGGCCGACTCATTCAGCAAC 2297 || ||||| ||| | ||| ||| || ||||| | ||| ||||| || || |||| | Sbjct 2924 GCATGCGAGCCGCTTGAGTAGTACCGGCGACGGAACAACGTTGCCGATTCGTTGAGCAGC 2865 Query 2298 GCGGCCTGTACGGCTGGCATCCATTCCGGCAGGCCGTAGATTTCCTGATCCGCGTCCGCC 2357 || | ||| || | | || ||||||||||| || |||||||||||||| | ||| ||| Sbjct 2864 GCCGACTGCACCACGGCCAACCATTCCGGCATCCCATAGATTTCCTGATCGGTGTCGGCC 2805 Query 2358 TCGCGCAGCTGGAACACCTCACCAGCGGGAAACTCATGCTCTACCCGTCCGGC 2410 || ||||||||| | ||| ||| | |||||| ||||| |||| ||||| Sbjct 2804 TCACGCAGCTGGTATACCGAGCCAAGTGCAAACTCGTGCTCGACCCACCCGGC 2752 >seq124024 Length=2559 Score = 89.7 bits (98), Expect = 1e-13 Identities = 51/52 (98%), Gaps = 0/52 (0%) Strand=Plus/Plus Query 30738 TGGTGCCGCTTATCCGAATCGAACGGATGACCTACTGTTTACAAGATAGTTG 30789 |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 2234 TGGTGCCGCTTATCCGAATCGAACGGATGACCTACTGTTTACAAGACAGTTG 2285 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 106932656163094