Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_023604.1 Length=44306 Score E Sequences producing significant alignments: (Bits) Value seq46588 86.0 2e-12 >seq46588 Length=8189 Score = 86.0 bits (94), Expect = 2e-12 Identities = 100/132 (76%), Gaps = 6/132 (5%) Strand=Plus/Plus Query 24582 CACGACCGTTTACGGGCACATGTGGAACGCGTTCGCGACGGGGCTCCGCGCCGGCCAACG 24641 ||| ||| | ||||||||||||| | ||| || |||| ||||| ||||||| || Sbjct 6594 CACCACCCTGTACGGGCACATGTCG--CGCTTT-GCGAACA---TCCGCACCGGCCAGCG 6647 Query 24642 CGTCGCGGCCGGCCAACTGATCGGCTACGTCGGCTCGAACGGCGAGTCGACGGGCCCGCA 24701 ||| ||| ||| |||||||||| |||||||||| |||| | | || |||||||| Sbjct 6648 CGTGGCGCAGGGCACGGTGATCGGCTATGTCGGCTCGACCGGCCTGGCCACCGGCCCGCA 6707 Query 24702 CCTGCACTTCGA 24713 |||||||| ||| Sbjct 6708 CCTGCACTACGA 6719 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 141359178876216