Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_023719.1 Length=497513 Score E Sequences producing significant alignments: (Bits) Value seq62245 93.3 1e-13 >seq62245 Length=2548 Score = 93.3 bits (102), Expect = 1e-13 Identities = 202/297 (68%), Gaps = 14/297 (5%) Strand=Plus/Minus Query 181044 TATGATAAAATTATTTTCATGTGTGATGCTGATGTCGATGGTTCTCATATTGAAGCACTA 181103 |||| ||||| ||| | ||| ||||||||| ||||| | |||||| || || Sbjct 2083 TATGGAAAAATCATTATTATGACAGATGCTGATACTGATGGGGCCCATATTAGAGTTTTA 2024 Query 181104 CTACTAACGTTATTCTATAATTATATGAGACCATTAATTGAAAAAGGGCATGTATATGCG 181163 || |||| || || || ||||||| | | |||||||||| || | || ||| Sbjct 2023 TTATTAACTTTCTTTTACCGTTATATGCGTACTTTAATTGAAAGTGGAAAAGTCTATATT 1964 Query 181164 GCTCAGCCACCATTATATCGAGTAGTTAAA---AAGAACGAATCAATTTACCTTAA---- 181216 ||| || || |||||| ||| | | || || ||| || |||| | || | Sbjct 1963 GCTTTACCTCCTTTATATA-AGTTGGTGAATACAAAAACTAAAAAATT--CTTTTATGCA 1907 Query 181217 --AGATGATCATGAGTTAAAAGAGT-ATACTAAGAAACATCCAAACGCTGAAGTTCAACG 181273 ||| || |||| || |||| | | | |||| | |||||| |||| | ||| | Sbjct 1906 TGAGAAGAATATGAACTAGAAGAATTAAAAAAAGATA-ATCCAAGTTATGAAATCCAAAG 1848 Query 181274 CTTCAAAGGTCTTGGTGAAATGAACGCAGATCAACTTTGGGAAACAACAATGGATCC 181330 | ||||| |||||||||||||| ||||| ||| | |||||||||||||||||||| Sbjct 1847 ATATAAAGGACTTGGTGAAATGAATGCAGAACAATTATGGGAAACAACAATGGATCC 1791 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588292066758848