Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_023744.1 Length=60588 Score E Sequences producing significant alignments: (Bits) Value seq161357 87.8 7e-13 seq166368 82.4 3e-11 >seq161357 Length=2110 Score = 87.8 bits (96), Expect = 7e-13 Identities = 113/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 49383 CGCCGGCCTGCCGTTCGTCCACCCGCATGTGGCGCTGATGCCCGACGCGCACGCCGGCAA 49442 ||||| | | || |||||| || ||||| ||||||| |||| |||| || || Sbjct 1422 CGCCGCCATTCCATTCGTCGGGCCCTGGGTGGCCGTGATGCCGGACGTGCACCTGGGAAA 1481 Query 49443 GGGTTCATCGGTCGGCACCGTCATCCCGACTATCGACGCCGTGATCCCGGCCGCGGTGGG 49502 ||| | | |||||| | || |||||||| || || | || ||||| |||||||| Sbjct 1482 GGGCGCGACCGTCGGCTCGGTGATCCCGACCCGCGGAGCGATCATTCCGGCGGCGGTGGG 1541 Query 49503 CGTGGACATCGGCTGCGGGATGATCGCCGCCCGCAC 49538 |||||||||||||||||| ||| ||| | ||||| Sbjct 1542 CGTGGACATCGGCTGCGGCATGGCCGCGGTGCGCAC 1577 >seq166368 Length=2936 Score = 82.4 bits (90), Expect = 3e-11 Identities = 108/148 (73%), Gaps = 4/148 (3%) Strand=Plus/Plus Query 50110 CACCACAACTACACGACGCAGGAACGGCACGGCGGCCGCGACGTGTGGCTGACCCGCAAG 50169 |||||||||||| | | ||||| ||||| ||| | || || | | ||||||||| Sbjct 295 CACCACAACTACGTGCAGAAGGAAACGCACGCCGGGCAGGAACTGCTGGTCACCCGCAAG 354 Query 50170 GGCGCCATCGACGCGCACGCC--GGCGTGATGGGCCTGATCCCGGGCAGCATGGGCACCC 50227 || || || | ||||||| |||| | ||||| | ||||| |||||||||||||| | Sbjct 355 GGTGCGGTC--AGTGCACGCCAGGGCGAGCTGGGCATCATCCCCGGCAGCATGGGCACGC 412 Query 50228 CGTCATACGTGGTGCGCGGCAAGGGCAA 50255 ||| | ||||| ||||||||||| Sbjct 413 GCAGCTACATCGTGCGTGGCAAGGGCAA 440 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 193351818039100