Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13]
177,401 sequences; 1,960,317,893 total letters
Query= NC_024303.1
Length=144898
Score E
Sequences producing significant alignments: (Bits) Value
seq50770 95.1 1e-14
seq57902 86.0 6e-12
>seq50770
Length=5884
Score = 95.1 bits (104), Expect = 1e-14
Identities = 212/313 (68%), Gaps = 19/313 (6%)
Strand=Plus/Plus
Query 20201 AATAATGCCTTTTGTGTGATAGATCTTGGAGAAATTGTGCAGAGACATTTTAGATGGCTC 20260
||||||||||| | ||| | ||||| ||||| ||| | ||| |||| | | ||||
Sbjct 3317 AATAATGCCTTCTATGTTGTGGATCTGGGAGACATTCTAAAGAAACATCTGAAATGGTCA 3376
Query 20261 AAGGCTTTGCCTAAAGTCATTCCA-----TTTTACGCCGTTAAGGCC-----CAGAACGA 20310
|| ||||| ||| | || || ||||| || || || | ||| | |
Sbjct 3377 AAAGCTTTTCCTTGGGACACCCCGCCCCCTTTTATGCAGTCAAATGCAGTGGCAGCAAAA 3436
Query 20311 CGAGAGAGTCCTCAAGACCCTAGCTGCCCTTAAAACTGGCTTTGACTGTGCCAGTAAGCA 20370
| | || | |||||||| | |||| | | || || |||||||||||||| |||
Sbjct 3437 CCATAGTG-----AAGACCCTTGTTGCCATCACGACAGGATTTGACTGTGCCAGCAAGAC 3491
Query 20371 GGAGATTCAGTTACTGCAAAATCTGGGAGT-TCACGCAGACAGGATACTTTTTGCGAATC 20429
|| || || || | |||| ||| || || || | |||| ||||| | | || |||||
Sbjct 3492 TGAAATACAATTGGTACAAACTCTTGGGGTGTCTC-CAGAGAGGATTATCTATGTGAATC 3550
Query 20430 CTTGTAAGCAGCCTTCGCATATAACGTATGCCGCTCAA-ACTGGAGTAAGGCTGATGACT 20488
||||||| || || || || | ||||| | |||| | |||||| | ||||||||
Sbjct 3551 CTTGTAAACAAGTGTCTCAGATTAAATATGCTG-TCAATAATGGAGTCCAGATGATGACT 3609
Query 20489 TTTGATAGTGAAG 20501
|||||||||||||
Sbjct 3610 TTTGATAGTGAAG 3622
>seq57902
Length=6150
Score = 86.0 bits (94), Expect = 6e-12
Identities = 126/176 (72%), Gaps = 2/176 (1%)
Strand=Plus/Minus
Query 21122 TCTAGCATTTGGGGGCCTAGCTGCGATGGCTTAGATTGCATTGTTAAGCGGTGTGAACTG 21181
|| ||||| ||||| || | ||||| ||| | || |||| || |||| || | ||
Sbjct 1970 TCCAGCATATGGGGACCGACATGCGACGGCCTCGACCGCATCGTGGAGCGCTGCGCCCTT 1911
Query 21182 CCAGAGCTTCAAGTGGGCGACTGGCTCATATTTGAAAACATGGGCGCTTACAGCTTGGTC 21241
|| ||| | || ||||| |||||| | | |||||||||||||||||||||| | | | |
Sbjct 1910 CCTGAGATGCAGGTGGGGGACTGGATGCTCTTTGAAAACATGGGCGCTTACACCGTTG-C 1852
Query 21242 AGCT-CTTCAACCTTTAACGGCTTCCCAAAGCCAGAAAAGCACTATGTTATTTCAG 21296
||| |||| || || || || |||| | |||| | ||||||| || ||||
Sbjct 1851 TGCTGCTTCCACTTTCAATGGATTCCAGAGGCCAACCATCTACTATGTGATGTCAG 1796
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462517681837680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |