Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_024303.1 Length=144898 Score E Sequences producing significant alignments: (Bits) Value seq50770 95.1 1e-14 seq57902 86.0 6e-12 >seq50770 Length=5884 Score = 95.1 bits (104), Expect = 1e-14 Identities = 212/313 (68%), Gaps = 19/313 (6%) Strand=Plus/Plus Query 20201 AATAATGCCTTTTGTGTGATAGATCTTGGAGAAATTGTGCAGAGACATTTTAGATGGCTC 20260 ||||||||||| | ||| | ||||| ||||| ||| | ||| |||| | | |||| Sbjct 3317 AATAATGCCTTCTATGTTGTGGATCTGGGAGACATTCTAAAGAAACATCTGAAATGGTCA 3376 Query 20261 AAGGCTTTGCCTAAAGTCATTCCA-----TTTTACGCCGTTAAGGCC-----CAGAACGA 20310 || ||||| ||| | || || ||||| || || || | ||| | | Sbjct 3377 AAAGCTTTTCCTTGGGACACCCCGCCCCCTTTTATGCAGTCAAATGCAGTGGCAGCAAAA 3436 Query 20311 CGAGAGAGTCCTCAAGACCCTAGCTGCCCTTAAAACTGGCTTTGACTGTGCCAGTAAGCA 20370 | | || | |||||||| | |||| | | || || |||||||||||||| ||| Sbjct 3437 CCATAGTG-----AAGACCCTTGTTGCCATCACGACAGGATTTGACTGTGCCAGCAAGAC 3491 Query 20371 GGAGATTCAGTTACTGCAAAATCTGGGAGT-TCACGCAGACAGGATACTTTTTGCGAATC 20429 || || || || | |||| ||| || || || | |||| ||||| | | || ||||| Sbjct 3492 TGAAATACAATTGGTACAAACTCTTGGGGTGTCTC-CAGAGAGGATTATCTATGTGAATC 3550 Query 20430 CTTGTAAGCAGCCTTCGCATATAACGTATGCCGCTCAA-ACTGGAGTAAGGCTGATGACT 20488 ||||||| || || || || | ||||| | |||| | |||||| | |||||||| Sbjct 3551 CTTGTAAACAAGTGTCTCAGATTAAATATGCTG-TCAATAATGGAGTCCAGATGATGACT 3609 Query 20489 TTTGATAGTGAAG 20501 ||||||||||||| Sbjct 3610 TTTGATAGTGAAG 3622 >seq57902 Length=6150 Score = 86.0 bits (94), Expect = 6e-12 Identities = 126/176 (72%), Gaps = 2/176 (1%) Strand=Plus/Minus Query 21122 TCTAGCATTTGGGGGCCTAGCTGCGATGGCTTAGATTGCATTGTTAAGCGGTGTGAACTG 21181 || ||||| ||||| || | ||||| ||| | || |||| || |||| || | || Sbjct 1970 TCCAGCATATGGGGACCGACATGCGACGGCCTCGACCGCATCGTGGAGCGCTGCGCCCTT 1911 Query 21182 CCAGAGCTTCAAGTGGGCGACTGGCTCATATTTGAAAACATGGGCGCTTACAGCTTGGTC 21241 || ||| | || ||||| |||||| | | |||||||||||||||||||||| | | | | Sbjct 1910 CCTGAGATGCAGGTGGGGGACTGGATGCTCTTTGAAAACATGGGCGCTTACACCGTTG-C 1852 Query 21242 AGCT-CTTCAACCTTTAACGGCTTCCCAAAGCCAGAAAAGCACTATGTTATTTCAG 21296 ||| |||| || || || || |||| | |||| | ||||||| || |||| Sbjct 1851 TGCTGCTTCCACTTTCAATGGATTCCAGAGGCCAACCATCTACTATGTGATGTCAG 1796 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462517681837680