Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13]
177,401 sequences; 1,960,317,893 total letters
Query= NC_024359.1
Length=133048
Score E
Sequences producing significant alignments: (Bits) Value
seq101107 232 6e-56
>seq101107
Length=18006
Score = 232 bits (256), Expect = 6e-56
Identities = 625/951 (66%), Gaps = 4/951 (0%)
Strand=Plus/Minus
Query 92042 AACTGGAACGATATTCGGTATCCATCTTTCTATCGAGCTTACAAAGAGTTAACTACAAAT 92101
||||||||||| |||| ||| || || |||||||| || ||||| || | | || ||
Sbjct 3839 AACTGGAACGACATTCCGTACCCCTCGTTCTATCGGGCGTACAAGGAACTGTCGACCAAC 3780
Query 92102 TACTGGTTGCCTGATGAGGTAGATATGAAGAGCGATGCCAAACAGTACAACCACTTATCC 92161
| |||| | || || || || || |||||| || || |||||| | | |||
Sbjct 3779 TTCTGGATCCCCGACGAAGTGGACATGAAGCTGGACGCACGCCAGTACGGTGAACTGTCC 3720
Query 92162 GAAGAAGAGAAATATGCGTTTGACTCCATTATCGGACTTTTAGCTACACTTGACTCACCC 92221
| | ||||| | || | ||||| || ||||| || | || || || || || ||
Sbjct 3719 GGACGCGAGAAGAACGCCTACGACTCGATCATCGGCCTGCTGGCCACGCTCGATTCGCCG 3660
Query 92222 CAAACACGTTTTATTTATAATATCGCAGAGTATGTCAGTGATGCCTCTGTTCATGCTATT 92281
|| || || || || || || |||| ||||| ||| ||| | | | ||||| | |
Sbjct 3659 CAGACCCGGTTCATCTACAACGTCGCCGAGTACATCACCGATCCGGCCGCGCATGCCAAT 3600
Query 92282 ACAGCTATTATTGCACAACAAGAAGCTATTCATAATGAGAGTTATTCTTATGTACTTGCT 92341
| || || || | || || |||| || ||||| || || || ||||| || ||
Sbjct 3599 GCGGCGATCATCGGCCAGCAGGAAGTGATACATAACGAAAGCTACAGCTATGTGCTGGCG 3540
Query 92342 TCTATTACTAACTTACAAGAGCAGAATCGAGTATTTGAGGAAGCTAGAACACACCCTACG 92401
|| || || | | | | ||||| || || || || || | || || || ||
Sbjct 3539 TCGATCACCGATCTGCCCAACCAGAACCGGGTGTTCGAACTGGCCCGCACGCATCCGACC 3480
Query 92402 ATTATTAAACGTAATGCACCTATTATGGAGTCTTATGACGATTTCATGAATAATAAAACA 92461
|| || | || || || || || ||| || | || ||||| |||||| | || ||
Sbjct 3479 ATCATCAGCCGCAACGCGCCGATCATGCAGGCGTACGACGACTTCATGCGCGACAAGACC 3420
Query 92462 CCTGAGAATATGGTAAAAGCTTTAGTACAATCATCTATCTTAGAGGGTATTAATTTCTAC 92521
| |||| || | || | | | || || || ||| | ||||| || || |||||
Sbjct 3419 GCGGAGACGCTGCTGAAGTCGCTGATCCAGTCGTCGATCCTGGAGGGCATCAACTTCTAT 3360
Query 92522 AGCGGTTTTGCTTACTTCTATAACCTTGTTCGTCAAAACAAGATGACGGGAACAGGTAAA 92581
||| || || || ||||| ||||| || || || ||| ||||| || || || ||
Sbjct 3359 TCCGGCTTCGCCTATTTCTACAACCTGGTGCGGCAGAACCGCATGACCGGCACCGGCAAG 3300
Query 92582 ATCATTAGCTTCATTAATCGTGATGAGTTAGCCCATTCGAAGTTTATTTCTGAGCTAATT 92641
||||| |||||||| || || || ||| | |||||| | ||||| || ||| | ||
Sbjct 3299 ATCATCAGCTTCATCAACCGCGACGAGCTGGCCCATACCAAGTTCATCAGCGAGGTGATC 3240
Query 92642 AGAGCTATTGTAGGGGAAAACCCTGAACTACAAACAGATGAACTAAATGACTACGTGTAT 92701
| || || || || || || || ||||| || || | || || | | ||||| |
Sbjct 3239 CGCGCCATCGTCGGCGAGAATCCGGAACTGCAGACCAACGAGCTGACGGCTTACGTACAC 3180
Query 92702 -GCTTCTTTTAGACATGCCGTAGAGCTAGAACAAGCG-TGGTCTAGTGAGGTACTACAGG 92759
|| ||| || |||||| | ||| || | || ||||| || || || | |
Sbjct 3179 AGCGCCTTCGAG-CATGCCATCACGCTGGAG-ACGCAATGGTCGTCGGAAGTGCTGGATG 3122
Query 92760 GCATTGAAGGAATTGATGTGGAAGAAATGTTAGACTATGTAAAATATCGTGCTAATAAAA 92819
|||| || || || |||||||| || ||| | ||| || || || || || || || |
Sbjct 3121 GCATCGACGGCATCGATGTGGACGAGATGGTGCGCTACGTGAAGTACCGCGCCAACAAGA 3062
Query 92820 TGTTAGGGATGCTAGGTCTCCAACCAATGTATCAAGGTCATACAGAAAATTCTATGACAT 92879
|| || ||||| ||| || | | |||| | | || || ||| ||| | |
Sbjct 3061 TGGCCGGCATGCTGGGTATCGAGCGGCTGTACAGCGATACGACCGACAATGTGATGCCGT 3002
Query 92880 GGATTAAAGCTTACGCCGATAATTTTACAGAAACAAAAACCGACTTTTTCGAAATGCGTA 92939
|||| || || |||||||| || || || ||||| || |||||||| ||||| ||||| |
Sbjct 3001 GGATCAAGGCCTACGCCGACAACTTCACCGAAACCAAGACCGACTTCTTCGAGATGCGCA 2942
Query 92940 ACTCTAGTTACAAGAAAACAAACTTAGACAATGGGTTCGATGACTTATGAG 92990
| | ||||||||||| || ||| | ||||| || ||||| || | ||||
Sbjct 2941 ATGCAAGTTACAAGAAGACCAACGTCGACAACGGCTTCGACGATCTCTGAG 2891
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424708558745249
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |