Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_024359.1 Length=133048 Score E Sequences producing significant alignments: (Bits) Value seq101107 232 6e-56 >seq101107 Length=18006 Score = 232 bits (256), Expect = 6e-56 Identities = 625/951 (66%), Gaps = 4/951 (0%) Strand=Plus/Minus Query 92042 AACTGGAACGATATTCGGTATCCATCTTTCTATCGAGCTTACAAAGAGTTAACTACAAAT 92101 ||||||||||| |||| ||| || || |||||||| || ||||| || | | || || Sbjct 3839 AACTGGAACGACATTCCGTACCCCTCGTTCTATCGGGCGTACAAGGAACTGTCGACCAAC 3780 Query 92102 TACTGGTTGCCTGATGAGGTAGATATGAAGAGCGATGCCAAACAGTACAACCACTTATCC 92161 | |||| | || || || || || |||||| || || |||||| | | ||| Sbjct 3779 TTCTGGATCCCCGACGAAGTGGACATGAAGCTGGACGCACGCCAGTACGGTGAACTGTCC 3720 Query 92162 GAAGAAGAGAAATATGCGTTTGACTCCATTATCGGACTTTTAGCTACACTTGACTCACCC 92221 | | ||||| | || | ||||| || ||||| || | || || || || || || Sbjct 3719 GGACGCGAGAAGAACGCCTACGACTCGATCATCGGCCTGCTGGCCACGCTCGATTCGCCG 3660 Query 92222 CAAACACGTTTTATTTATAATATCGCAGAGTATGTCAGTGATGCCTCTGTTCATGCTATT 92281 || || || || || || || |||| ||||| ||| ||| | | | ||||| | | Sbjct 3659 CAGACCCGGTTCATCTACAACGTCGCCGAGTACATCACCGATCCGGCCGCGCATGCCAAT 3600 Query 92282 ACAGCTATTATTGCACAACAAGAAGCTATTCATAATGAGAGTTATTCTTATGTACTTGCT 92341 | || || || | || || |||| || ||||| || || || ||||| || || Sbjct 3599 GCGGCGATCATCGGCCAGCAGGAAGTGATACATAACGAAAGCTACAGCTATGTGCTGGCG 3540 Query 92342 TCTATTACTAACTTACAAGAGCAGAATCGAGTATTTGAGGAAGCTAGAACACACCCTACG 92401 || || || | | | | ||||| || || || || || | || || || || Sbjct 3539 TCGATCACCGATCTGCCCAACCAGAACCGGGTGTTCGAACTGGCCCGCACGCATCCGACC 3480 Query 92402 ATTATTAAACGTAATGCACCTATTATGGAGTCTTATGACGATTTCATGAATAATAAAACA 92461 || || | || || || || || ||| || | || ||||| |||||| | || || Sbjct 3479 ATCATCAGCCGCAACGCGCCGATCATGCAGGCGTACGACGACTTCATGCGCGACAAGACC 3420 Query 92462 CCTGAGAATATGGTAAAAGCTTTAGTACAATCATCTATCTTAGAGGGTATTAATTTCTAC 92521 | |||| || | || | | | || || || ||| | ||||| || || ||||| Sbjct 3419 GCGGAGACGCTGCTGAAGTCGCTGATCCAGTCGTCGATCCTGGAGGGCATCAACTTCTAT 3360 Query 92522 AGCGGTTTTGCTTACTTCTATAACCTTGTTCGTCAAAACAAGATGACGGGAACAGGTAAA 92581 ||| || || || ||||| ||||| || || || ||| ||||| || || || || Sbjct 3359 TCCGGCTTCGCCTATTTCTACAACCTGGTGCGGCAGAACCGCATGACCGGCACCGGCAAG 3300 Query 92582 ATCATTAGCTTCATTAATCGTGATGAGTTAGCCCATTCGAAGTTTATTTCTGAGCTAATT 92641 ||||| |||||||| || || || ||| | |||||| | ||||| || ||| | || Sbjct 3299 ATCATCAGCTTCATCAACCGCGACGAGCTGGCCCATACCAAGTTCATCAGCGAGGTGATC 3240 Query 92642 AGAGCTATTGTAGGGGAAAACCCTGAACTACAAACAGATGAACTAAATGACTACGTGTAT 92701 | || || || || || || || ||||| || || | || || | | ||||| | Sbjct 3239 CGCGCCATCGTCGGCGAGAATCCGGAACTGCAGACCAACGAGCTGACGGCTTACGTACAC 3180 Query 92702 -GCTTCTTTTAGACATGCCGTAGAGCTAGAACAAGCG-TGGTCTAGTGAGGTACTACAGG 92759 || ||| || |||||| | ||| || | || ||||| || || || | | Sbjct 3179 AGCGCCTTCGAG-CATGCCATCACGCTGGAG-ACGCAATGGTCGTCGGAAGTGCTGGATG 3122 Query 92760 GCATTGAAGGAATTGATGTGGAAGAAATGTTAGACTATGTAAAATATCGTGCTAATAAAA 92819 |||| || || || |||||||| || ||| | ||| || || || || || || || | Sbjct 3121 GCATCGACGGCATCGATGTGGACGAGATGGTGCGCTACGTGAAGTACCGCGCCAACAAGA 3062 Query 92820 TGTTAGGGATGCTAGGTCTCCAACCAATGTATCAAGGTCATACAGAAAATTCTATGACAT 92879 || || ||||| ||| || | | |||| | | || || ||| ||| | | Sbjct 3061 TGGCCGGCATGCTGGGTATCGAGCGGCTGTACAGCGATACGACCGACAATGTGATGCCGT 3002 Query 92880 GGATTAAAGCTTACGCCGATAATTTTACAGAAACAAAAACCGACTTTTTCGAAATGCGTA 92939 |||| || || |||||||| || || || ||||| || |||||||| ||||| ||||| | Sbjct 3001 GGATCAAGGCCTACGCCGACAACTTCACCGAAACCAAGACCGACTTCTTCGAGATGCGCA 2942 Query 92940 ACTCTAGTTACAAGAAAACAAACTTAGACAATGGGTTCGATGACTTATGAG 92990 | | ||||||||||| || ||| | ||||| || ||||| || | |||| Sbjct 2941 ATGCAAGTTACAAGAAGACCAACGTCGACAACGGCTTCGACGATCTCTGAG 2891 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424708558745249