Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_024360.1 Length=138036 Score E Sequences producing significant alignments: (Bits) Value seq101107 262 3e-65 >seq101107 Length=18006 Score = 262 bits (290), Expect = 3e-65 Identities = 634/952 (67%), Gaps = 6/952 (1%) Strand=Plus/Minus Query 104780 AACTGGAATGATATTCGGTATCCGTCTTTCTATCGAGCTTACAAGGAGTTAACTACAAAT 104839 |||||||| || |||| ||| || || |||||||| || |||||||| | | || || Sbjct 3839 AACTGGAACGACATTCCGTACCCCTCGTTCTATCGGGCGTACAAGGAACTGTCGACCAAC 3780 Query 104840 TACTGGTTGCCCGATGAGGTAGATATGAAGAGTGATGCCAAACAGTACAACCACTTACCC 104899 | |||| | ||||| || || || |||||| || || |||||| | | || Sbjct 3779 TTCTGGATCCCCGACGAAGTGGACATGAAGCTGGACGCACGCCAGTACGGTGAACTGTCC 3720 Query 104900 GAAGAAGAGAAGTATGCGTTTGATTCCATTATTGGACTTTTAGCTACACTTGACTCACCT 104959 | | |||||| | || | || || || || || || | || || || || || || Sbjct 3719 GGACGCGAGAAGAACGCCTACGACTCGATCATCGGCCTGCTGGCCACGCTCGATTCGCCG 3660 Query 104960 CAAACACGTTTTATTTATAATATCGCAGAATATGTCAGTGATGCCTCTGTTCATGCTATT 105019 || || || || || || || |||| || || ||| ||| | | | ||||| | | Sbjct 3659 CAGACCCGGTTCATCTACAACGTCGCCGAGTACATCACCGATCCGGCCGCGCATGCCAAT 3600 Query 105020 ACTGCTATCATTGCACAACAAGAAGCTATTCATAACGAAAGCTACTCTTATGTACTTGCT 105079 | || ||||| | || || |||| || ||||||||||||||| ||||| || || Sbjct 3599 GCGGCGATCATCGGCCAGCAGGAAGTGATACATAACGAAAGCTACAGCTATGTGCTGGCG 3540 Query 105080 TCTATTACTAACTTACAGGAGCAGAATCGAGTATTTGAGGAAGCTAGAACACACCCTACG 105139 || || || | | | | ||||| || || || || || | || || || || Sbjct 3539 TCGATCACCGATCTGCCCAACCAGAACCGGGTGTTCGAACTGGCCCGCACGCATCCGACC 3480 Query 105140 ATTATTAAACGTAATGCACCTATTATGGAGTCTTATGACGATTTCATGAATAATAAAACA 105199 || || | || || || || || ||| || | || ||||| |||||| | || || Sbjct 3479 ATCATCAGCCGCAACGCGCCGATCATGCAGGCGTACGACGACTTCATGCGCGACAAGACC 3420 Query 105200 CCTGAGAATATGGTAAAAGCTTTAGTACAATCATCTATCTTAGAGGGTATTAATTTCTAC 105259 | |||| || | || | | | || || || ||| | ||||| || || ||||| Sbjct 3419 GCGGAGACGCTGCTGAAGTCGCTGATCCAGTCGTCGATCCTGGAGGGCATCAACTTCTAT 3360 Query 105260 AGCGGTTTTGCTTACTTCTATAACCTCGTTCGTCAAAACAAGATGACAGGGACAGGTAAA 105319 ||| || || || ||||| ||||| || || || ||| ||||| || || || || Sbjct 3359 TCCGGCTTCGCCTATTTCTACAACCTGGTGCGGCAGAACCGCATGACCGGCACCGGCAAG 3300 Query 105320 ATCATCAGCTTCATTAATCGTGATGAGTTAGCCCATTCGAAGTTTATTTCTGAGCTAATT 105379 |||||||||||||| || || || ||| | |||||| | ||||| || ||| | || Sbjct 3299 ATCATCAGCTTCATCAACCGCGACGAGCTGGCCCATACCAAGTTCATCAGCGAGGTGATC 3240 Query 105380 AGAGCTATTGTAGGGGAAAACCCTGAACTACAAACAGATGAACTAAATGACTACGTATAT 105439 | || || || || || || || ||||| || || | || || | | |||||| | Sbjct 3239 CGCGCCATCGTCGGCGAGAATCCGGAACTGCAGACCAACGAGCTGACGGCTTACGTACAC 3180 Query 105440 -GCTTCTTTTAGACATGCTGTAGAGCTAGAACAAGCA-TGGTCTAGTGAGGTACTACAGG 105497 || ||| || ||||| | ||| || | ||| ||||| || || || | | Sbjct 3179 AGCGCCTTCGAG-CATGCCATCACGCTGGAG-ACGCAATGGTCGTCGGAAGTGCTGGATG 3122 Query 105498 GCATTGAAGGAATTGATGTGGAAGAAATGTTAGACTATGTAAAATATCGCGCTAATAAAA 105557 |||| || || || |||||||| || ||| | ||| || || || ||||| || || | Sbjct 3121 GCATCGACGGCATCGATGTGGACGAGATGGTGCGCTACGTGAAGTACCGCGCCAACAAGA 3062 Query 105558 TGTTAGGGATGCTAGGTCTCCAACCAATGTATCAAGGTCAC-ACAGAAAATTCTATGACA 105616 || || ||||| ||| || | | |||| || | || || || ||| ||| | Sbjct 3061 TGGCCGGCATGCTGGGTATCGAGCGGCTGTA-CAGCGATACGACCGACAATGTGATGCCG 3003 Query 105617 TGGATTAAAGCTTACGCCGATAACTTTACAGAAACAAAAACCGATTTTTTCGAAATGCGT 105676 ||||| || || |||||||| ||||| || ||||| || ||||| || ||||| ||||| Sbjct 3002 TGGATCAAGGCCTACGCCGACAACTTCACCGAAACCAAGACCGACTTCTTCGAGATGCGC 2943 Query 105677 AACTCTAGTTACAAGAAAACAAACTTAGACAATGGGTTCGATGACTTATGAG 105728 || | ||||||||||| || ||| | ||||| || ||||| || | |||| Sbjct 2942 AATGCAAGTTACAAGAAGACCAACGTCGACAACGGCTTCGACGATCTCTGAG 2891 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 440607974864160