Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13]
177,401 sequences; 1,960,317,893 total letters
Query= NC_024360.1
Length=138036
Score E
Sequences producing significant alignments: (Bits) Value
seq101107 262 3e-65
>seq101107
Length=18006
Score = 262 bits (290), Expect = 3e-65
Identities = 634/952 (67%), Gaps = 6/952 (1%)
Strand=Plus/Minus
Query 104780 AACTGGAATGATATTCGGTATCCGTCTTTCTATCGAGCTTACAAGGAGTTAACTACAAAT 104839
|||||||| || |||| ||| || || |||||||| || |||||||| | | || ||
Sbjct 3839 AACTGGAACGACATTCCGTACCCCTCGTTCTATCGGGCGTACAAGGAACTGTCGACCAAC 3780
Query 104840 TACTGGTTGCCCGATGAGGTAGATATGAAGAGTGATGCCAAACAGTACAACCACTTACCC 104899
| |||| | ||||| || || || |||||| || || |||||| | | ||
Sbjct 3779 TTCTGGATCCCCGACGAAGTGGACATGAAGCTGGACGCACGCCAGTACGGTGAACTGTCC 3720
Query 104900 GAAGAAGAGAAGTATGCGTTTGATTCCATTATTGGACTTTTAGCTACACTTGACTCACCT 104959
| | |||||| | || | || || || || || || | || || || || || ||
Sbjct 3719 GGACGCGAGAAGAACGCCTACGACTCGATCATCGGCCTGCTGGCCACGCTCGATTCGCCG 3660
Query 104960 CAAACACGTTTTATTTATAATATCGCAGAATATGTCAGTGATGCCTCTGTTCATGCTATT 105019
|| || || || || || || |||| || || ||| ||| | | | ||||| | |
Sbjct 3659 CAGACCCGGTTCATCTACAACGTCGCCGAGTACATCACCGATCCGGCCGCGCATGCCAAT 3600
Query 105020 ACTGCTATCATTGCACAACAAGAAGCTATTCATAACGAAAGCTACTCTTATGTACTTGCT 105079
| || ||||| | || || |||| || ||||||||||||||| ||||| || ||
Sbjct 3599 GCGGCGATCATCGGCCAGCAGGAAGTGATACATAACGAAAGCTACAGCTATGTGCTGGCG 3540
Query 105080 TCTATTACTAACTTACAGGAGCAGAATCGAGTATTTGAGGAAGCTAGAACACACCCTACG 105139
|| || || | | | | ||||| || || || || || | || || || ||
Sbjct 3539 TCGATCACCGATCTGCCCAACCAGAACCGGGTGTTCGAACTGGCCCGCACGCATCCGACC 3480
Query 105140 ATTATTAAACGTAATGCACCTATTATGGAGTCTTATGACGATTTCATGAATAATAAAACA 105199
|| || | || || || || || ||| || | || ||||| |||||| | || ||
Sbjct 3479 ATCATCAGCCGCAACGCGCCGATCATGCAGGCGTACGACGACTTCATGCGCGACAAGACC 3420
Query 105200 CCTGAGAATATGGTAAAAGCTTTAGTACAATCATCTATCTTAGAGGGTATTAATTTCTAC 105259
| |||| || | || | | | || || || ||| | ||||| || || |||||
Sbjct 3419 GCGGAGACGCTGCTGAAGTCGCTGATCCAGTCGTCGATCCTGGAGGGCATCAACTTCTAT 3360
Query 105260 AGCGGTTTTGCTTACTTCTATAACCTCGTTCGTCAAAACAAGATGACAGGGACAGGTAAA 105319
||| || || || ||||| ||||| || || || ||| ||||| || || || ||
Sbjct 3359 TCCGGCTTCGCCTATTTCTACAACCTGGTGCGGCAGAACCGCATGACCGGCACCGGCAAG 3300
Query 105320 ATCATCAGCTTCATTAATCGTGATGAGTTAGCCCATTCGAAGTTTATTTCTGAGCTAATT 105379
|||||||||||||| || || || ||| | |||||| | ||||| || ||| | ||
Sbjct 3299 ATCATCAGCTTCATCAACCGCGACGAGCTGGCCCATACCAAGTTCATCAGCGAGGTGATC 3240
Query 105380 AGAGCTATTGTAGGGGAAAACCCTGAACTACAAACAGATGAACTAAATGACTACGTATAT 105439
| || || || || || || || ||||| || || | || || | | |||||| |
Sbjct 3239 CGCGCCATCGTCGGCGAGAATCCGGAACTGCAGACCAACGAGCTGACGGCTTACGTACAC 3180
Query 105440 -GCTTCTTTTAGACATGCTGTAGAGCTAGAACAAGCA-TGGTCTAGTGAGGTACTACAGG 105497
|| ||| || ||||| | ||| || | ||| ||||| || || || | |
Sbjct 3179 AGCGCCTTCGAG-CATGCCATCACGCTGGAG-ACGCAATGGTCGTCGGAAGTGCTGGATG 3122
Query 105498 GCATTGAAGGAATTGATGTGGAAGAAATGTTAGACTATGTAAAATATCGCGCTAATAAAA 105557
|||| || || || |||||||| || ||| | ||| || || || ||||| || || |
Sbjct 3121 GCATCGACGGCATCGATGTGGACGAGATGGTGCGCTACGTGAAGTACCGCGCCAACAAGA 3062
Query 105558 TGTTAGGGATGCTAGGTCTCCAACCAATGTATCAAGGTCAC-ACAGAAAATTCTATGACA 105616
|| || ||||| ||| || | | |||| || | || || || ||| ||| |
Sbjct 3061 TGGCCGGCATGCTGGGTATCGAGCGGCTGTA-CAGCGATACGACCGACAATGTGATGCCG 3003
Query 105617 TGGATTAAAGCTTACGCCGATAACTTTACAGAAACAAAAACCGATTTTTTCGAAATGCGT 105676
||||| || || |||||||| ||||| || ||||| || ||||| || ||||| |||||
Sbjct 3002 TGGATCAAGGCCTACGCCGACAACTTCACCGAAACCAAGACCGACTTCTTCGAGATGCGC 2943
Query 105677 AACTCTAGTTACAAGAAAACAAACTTAGACAATGGGTTCGATGACTTATGAG 105728
|| | ||||||||||| || ||| | ||||| || ||||| || | ||||
Sbjct 2942 AATGCAAGTTACAAGAAGACCAACGTCGACAACGGCTTCGACGATCTCTGAG 2891
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 440607974864160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |