Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_024364.1 Length=131952 Score E Sequences producing significant alignments: (Bits) Value seq101107 232 6e-56 >seq101107 Length=18006 Score = 232 bits (256), Expect = 6e-56 Identities = 625/951 (66%), Gaps = 4/951 (0%) Strand=Plus/Plus Query 37996 CTCATAAGTCATCGAACCCATTATCTAAATTTGTTTTCTTGTAACTAGAGTTACGCATTT 38055 |||| | || ||||| || || || | || || ||||||||||| | || ||||| | Sbjct 2891 CTCAGAGATCGTCGAAGCCGTTGTCGACGTTGGTCTTCTTGTAACTTGCATTGCGCATCT 2950 Query 38056 CGAAAAAGTCGGTTTTTGTTTCTGTAAAGTTATCGGCGTAAGCTTTAATCCATGTCATAG 38115 |||| |||||||| || ||||| || ||||| |||||||| || || ||||| | ||| Sbjct 2951 CGAAGAAGTCGGTCTTGGTTTCGGTGAAGTTGTCGGCGTAGGCCTTGATCCACGGCATCA 3010 Query 38116 AATTTTCTGTATGACCTTGATACATTGGTTGGAGACCTAGCATCCCTAACATTTTATTAG 38175 ||| || || | | |||| | | || ||| ||||| || ||| || || | Sbjct 3011 CATTGTCGGTCGTATCGCTGTACAGCCGCTCGATACCCAGCATGCCGGCCATCTTGTTGG 3070 Query 38176 CACGATATTTTACATAGTCTAACATTTCTTCCACATCAATTCCTTCAATGCCTTGTAGTA 38235 | || || || || ||| | ||| || |||||||| || || || ||||| | || | Sbjct 3071 CGCGGTACTTCACGTAGCGCACCATCTCGTCCACATCGATGCCGTCGATGCCATCCAGCA 3130 Query 38236 CCTCACTAGACCA-TGCTTGTTCTAGCTCTACAGCATGTCTAAAAGAAGC-ATACACGTA 38293 | || ||||| ||| | || ||| | ||||| || ||| || | ||||| Sbjct 3131 CTTCCGACGACCATTGCGT-CTCCAGCGTGATGGCATG-CTCGAAGGCGCTGTGTACGTA 3188 Query 38294 GTCATTTAGTTCATCTGTTTGTAGTTCAGGGTTTTCCCCTACAATAGCTCTAATTAGCTC 38353 | | || || | || || ||||| || || || || || || || | || | ||| Sbjct 3189 AGCCGTCAGCTCGTTGGTCTGCAGTTCCGGATTCTCGCCGACGATGGCGCGGATCACCTC 3248 Query 38354 AGAAATAAACTTCGAATGGGCTAACTCATCACGATTAATGAAGCTAATGATTTTACCTGT 38413 || ||||| | |||||| | ||| || || || |||||||| ||||| || || || Sbjct 3249 GCTGATGAACTTGGTATGGGCCAGCTCGTCGCGGTTGATGAAGCTGATGATCTTGCCGGT 3308 Query 38414 TCCCGTCATCTTGTTTTGACGAACAAGGTTATAGAAGTAAGCAAAACCGCTGTAGAAATT 38473 || ||||| ||| || || || ||||| ||||| || || || ||| ||||| || Sbjct 3309 GCCGGTCATGCGGTTCTGCCGCACCAGGTTGTAGAAATAGGCGAAGCCGGAATAGAAGTT 3368 Query 38474 AATACCCTCTAAGATAGATGATTGTACTAAAGCTTTTACCATATTCTCAGGTGTTTTGTT 38533 || ||||| | ||| || || || | | | || | || |||| | || |||| Sbjct 3369 GATGCCCTCCAGGATCGACGACTGGATCAGCGACTTCAGCAGCGTCTCCGCGGTCTTGTC 3428 Query 38534 ATTCATGAAATCGTCATAAGACTTCATAATAGGTGCATTACGTTTAATAATCGTAGGGTG 38593 |||||| ||||| || | || ||| || || || || || | || || || || || Sbjct 3429 GCGCATGAAGTCGTCGTACGCCTGCATGATCGGCGCGTTGCGGCTGATGATGGTCGGATG 3488 Query 38594 TGTTCTAGCTTCCTCAAATACTCGATTCTGCTCTTGTAAGTTAGTAATAGAAGCAAGTAC 38653 || | || || || || || ||||| | | | | || || || || || || Sbjct 3489 CGTGCGGGCCAGTTCGAACACCCGGTTCTGGTTGGGCAGATCGGTGATCGACGCCAGCAC 3548 Query 38654 ATAAGAATAACTCTCATTATGAATAGCTTCTTGTTGTGCAATAATAGCTGTAATAGCATG 38713 ||| || || || ||||| || |||| || || | || || || | | | ||||| Sbjct 3549 ATAGCTGTAGCTTTCGTTATGTATCACTTCCTGCTGGCCGATGATCGCCGCATTGGCATG 3608 Query 38714 AACAGAGGCATCACTGACATACTCTGCGATATTATAAATAAAACGTGTTTGGGGTGAGTC 38773 | | | ||| ||| ||||| |||| || || || || || || || || || || Sbjct 3609 CGCGGCCGGATCGGTGATGTACTCGGCGACGTTGTAGATGAACCGGGTCTGCGGCGAATC 3668 Query 38774 AAGTGTAGCTAAAAGTCCGATAATGGAGTCAAACGCATATTTCTCTTCTTCGGATAAGTG 38833 || || || | || ||||| || ||||| | || | ||||| | |||| | | Sbjct 3669 GAGCGTGGCCAGCAGGCCGATGATCGAGTCGTAGGCGTTCTTCTCGCGTCCGGACAGTTC 3728 Query 38834 GTTGTACTGTTTGGCATCGCTCTTCATATCTACCTCATCAGGCAACCAGTAATTTGTAGT 38893 |||||| || || |||||| || || || || || | |||| | || || | Sbjct 3729 ACCGTACTGGCGTGCGTCCAGCTTCATGTCCACTTCGTCGGGGATCCAGAAGTTGGTCGA 3788 Query 38894 TAACTCTTTGTAAGCTCGATAGAAAGATGGATACCGAATATCGTTCCAGTT 38944 | || ||||| || |||||||| || || ||| |||| ||||||||||| Sbjct 3789 CAGTTCCTTGTACGCCCGATAGAACGAGGGGTACGGAATGTCGTTCCAGTT 3839 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421208941573593