Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13]
177,401 sequences; 1,960,317,893 total letters
Query= NC_024364.1
Length=131952
Score E
Sequences producing significant alignments: (Bits) Value
seq101107 232 6e-56
>seq101107
Length=18006
Score = 232 bits (256), Expect = 6e-56
Identities = 625/951 (66%), Gaps = 4/951 (0%)
Strand=Plus/Plus
Query 37996 CTCATAAGTCATCGAACCCATTATCTAAATTTGTTTTCTTGTAACTAGAGTTACGCATTT 38055
|||| | || ||||| || || || | || || ||||||||||| | || ||||| |
Sbjct 2891 CTCAGAGATCGTCGAAGCCGTTGTCGACGTTGGTCTTCTTGTAACTTGCATTGCGCATCT 2950
Query 38056 CGAAAAAGTCGGTTTTTGTTTCTGTAAAGTTATCGGCGTAAGCTTTAATCCATGTCATAG 38115
|||| |||||||| || ||||| || ||||| |||||||| || || ||||| | |||
Sbjct 2951 CGAAGAAGTCGGTCTTGGTTTCGGTGAAGTTGTCGGCGTAGGCCTTGATCCACGGCATCA 3010
Query 38116 AATTTTCTGTATGACCTTGATACATTGGTTGGAGACCTAGCATCCCTAACATTTTATTAG 38175
||| || || | | |||| | | || ||| ||||| || ||| || || |
Sbjct 3011 CATTGTCGGTCGTATCGCTGTACAGCCGCTCGATACCCAGCATGCCGGCCATCTTGTTGG 3070
Query 38176 CACGATATTTTACATAGTCTAACATTTCTTCCACATCAATTCCTTCAATGCCTTGTAGTA 38235
| || || || || ||| | ||| || |||||||| || || || ||||| | || |
Sbjct 3071 CGCGGTACTTCACGTAGCGCACCATCTCGTCCACATCGATGCCGTCGATGCCATCCAGCA 3130
Query 38236 CCTCACTAGACCA-TGCTTGTTCTAGCTCTACAGCATGTCTAAAAGAAGC-ATACACGTA 38293
| || ||||| ||| | || ||| | ||||| || ||| || | |||||
Sbjct 3131 CTTCCGACGACCATTGCGT-CTCCAGCGTGATGGCATG-CTCGAAGGCGCTGTGTACGTA 3188
Query 38294 GTCATTTAGTTCATCTGTTTGTAGTTCAGGGTTTTCCCCTACAATAGCTCTAATTAGCTC 38353
| | || || | || || ||||| || || || || || || || | || | |||
Sbjct 3189 AGCCGTCAGCTCGTTGGTCTGCAGTTCCGGATTCTCGCCGACGATGGCGCGGATCACCTC 3248
Query 38354 AGAAATAAACTTCGAATGGGCTAACTCATCACGATTAATGAAGCTAATGATTTTACCTGT 38413
|| ||||| | |||||| | ||| || || || |||||||| ||||| || || ||
Sbjct 3249 GCTGATGAACTTGGTATGGGCCAGCTCGTCGCGGTTGATGAAGCTGATGATCTTGCCGGT 3308
Query 38414 TCCCGTCATCTTGTTTTGACGAACAAGGTTATAGAAGTAAGCAAAACCGCTGTAGAAATT 38473
|| ||||| ||| || || || ||||| ||||| || || || ||| ||||| ||
Sbjct 3309 GCCGGTCATGCGGTTCTGCCGCACCAGGTTGTAGAAATAGGCGAAGCCGGAATAGAAGTT 3368
Query 38474 AATACCCTCTAAGATAGATGATTGTACTAAAGCTTTTACCATATTCTCAGGTGTTTTGTT 38533
|| ||||| | ||| || || || | | | || | || |||| | || ||||
Sbjct 3369 GATGCCCTCCAGGATCGACGACTGGATCAGCGACTTCAGCAGCGTCTCCGCGGTCTTGTC 3428
Query 38534 ATTCATGAAATCGTCATAAGACTTCATAATAGGTGCATTACGTTTAATAATCGTAGGGTG 38593
|||||| ||||| || | || ||| || || || || || | || || || || ||
Sbjct 3429 GCGCATGAAGTCGTCGTACGCCTGCATGATCGGCGCGTTGCGGCTGATGATGGTCGGATG 3488
Query 38594 TGTTCTAGCTTCCTCAAATACTCGATTCTGCTCTTGTAAGTTAGTAATAGAAGCAAGTAC 38653
|| | || || || || || ||||| | | | | || || || || || ||
Sbjct 3489 CGTGCGGGCCAGTTCGAACACCCGGTTCTGGTTGGGCAGATCGGTGATCGACGCCAGCAC 3548
Query 38654 ATAAGAATAACTCTCATTATGAATAGCTTCTTGTTGTGCAATAATAGCTGTAATAGCATG 38713
||| || || || ||||| || |||| || || | || || || | | | |||||
Sbjct 3549 ATAGCTGTAGCTTTCGTTATGTATCACTTCCTGCTGGCCGATGATCGCCGCATTGGCATG 3608
Query 38714 AACAGAGGCATCACTGACATACTCTGCGATATTATAAATAAAACGTGTTTGGGGTGAGTC 38773
| | | ||| ||| ||||| |||| || || || || || || || || || ||
Sbjct 3609 CGCGGCCGGATCGGTGATGTACTCGGCGACGTTGTAGATGAACCGGGTCTGCGGCGAATC 3668
Query 38774 AAGTGTAGCTAAAAGTCCGATAATGGAGTCAAACGCATATTTCTCTTCTTCGGATAAGTG 38833
|| || || | || ||||| || ||||| | || | ||||| | |||| | |
Sbjct 3669 GAGCGTGGCCAGCAGGCCGATGATCGAGTCGTAGGCGTTCTTCTCGCGTCCGGACAGTTC 3728
Query 38834 GTTGTACTGTTTGGCATCGCTCTTCATATCTACCTCATCAGGCAACCAGTAATTTGTAGT 38893
|||||| || || |||||| || || || || || | |||| | || || |
Sbjct 3729 ACCGTACTGGCGTGCGTCCAGCTTCATGTCCACTTCGTCGGGGATCCAGAAGTTGGTCGA 3788
Query 38894 TAACTCTTTGTAAGCTCGATAGAAAGATGGATACCGAATATCGTTCCAGTT 38944
| || ||||| || |||||||| || || ||| |||| |||||||||||
Sbjct 3789 CAGTTCCTTGTACGCCCGATAGAACGAGGGGTACGGAATGTCGTTCCAGTT 3839
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 421208941573593
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |