Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_024383.1 Length=135831 Score E Sequences producing significant alignments: (Bits) Value seq101107 248 8e-61 >seq101107 Length=18006 Score = 248 bits (274), Expect = 8e-61 Identities = 631/952 (66%), Gaps = 6/952 (1%) Strand=Plus/Minus Query 96217 AACTGGAACGATATTCGGTATCCGTCTTTCTATCGAGCTTACAAAGAGTTAACTACAAAT 96276 ||||||||||| |||| ||| || || |||||||| || ||||| || | | || || Sbjct 3839 AACTGGAACGACATTCCGTACCCCTCGTTCTATCGGGCGTACAAGGAACTGTCGACCAAC 3780 Query 96277 TACTGGTTGCCTGATGAGGTAGATATGAAGAGCGATGCCAAACAGTACAACCACTTATCC 96336 | |||| | || || || || || |||||| || || |||||| | | ||| Sbjct 3779 TTCTGGATCCCCGACGAAGTGGACATGAAGCTGGACGCACGCCAGTACGGTGAACTGTCC 3720 Query 96337 GAAGAAGAGAAGTATGCGTTTGACTCCATTATCGGACTTTTAGCTACACTTGACTCACCC 96396 | | |||||| | || | ||||| || ||||| || | || || || || || || Sbjct 3719 GGACGCGAGAAGAACGCCTACGACTCGATCATCGGCCTGCTGGCCACGCTCGATTCGCCG 3660 Query 96397 CAAACACGTTTTATTTATAATATCGCAGAGTATGTCAGTGATGCCTCCGTTCATGCTATT 96456 || || || || || || || |||| ||||| ||| ||| | ||| ||||| | | Sbjct 3659 CAGACCCGGTTCATCTACAACGTCGCCGAGTACATCACCGATCCGGCCGCGCATGCCAAT 3600 Query 96457 ACAGCTATCATTGCACAACAAGAAGCTATTCATAATGAGAGTTATTCTTATGTACTTGCT 96516 | || ||||| | || || |||| || ||||| || || || ||||| || || Sbjct 3599 GCGGCGATCATCGGCCAGCAGGAAGTGATACATAACGAAAGCTACAGCTATGTGCTGGCG 3540 Query 96517 TCTATTACTAACTTACAAGAGCAGAATCGAGTATTTGAGGAAGCTAGAACACACCCTACG 96576 || || || | | | | ||||| || || || || || | || || || || Sbjct 3539 TCGATCACCGATCTGCCCAACCAGAACCGGGTGTTCGAACTGGCCCGCACGCATCCGACC 3480 Query 96577 ATTATTAAACGTAATGCACCTATTATGAAGTCTTATGACGATTTCATGAATAACAAAACA 96636 || || | || || || || || ||| || | || ||||| |||||| |||| || Sbjct 3479 ATCATCAGCCGCAACGCGCCGATCATGCAGGCGTACGACGACTTCATGCGCGACAAGACC 3420 Query 96637 CCTGAGAATATGGTAAAAGCTTTAGTACAATCATCTATCTTAGAGGGTATTAATTTCTAC 96696 | |||| || | || | | | || || || ||| | ||||| || || ||||| Sbjct 3419 GCGGAGACGCTGCTGAAGTCGCTGATCCAGTCGTCGATCCTGGAGGGCATCAACTTCTAT 3360 Query 96697 AGCGGTTTTGCTTACTTCTACAACCTCGTTCGTCAAAACAAGATGACGGGGACAGGTAAA 96756 ||| || || || ||||||||||| || || || ||| ||||| || || || || Sbjct 3359 TCCGGCTTCGCCTATTTCTACAACCTGGTGCGGCAGAACCGCATGACCGGCACCGGCAAG 3300 Query 96757 ATCATTAGCTTCATTAATCGTGATGAATTAGCCCATTCGAAATTTATTTCTGAGCTAATT 96816 ||||| |||||||| || || || || | |||||| | || || || ||| | || Sbjct 3299 ATCATCAGCTTCATCAACCGCGACGAGCTGGCCCATACCAAGTTCATCAGCGAGGTGATC 3240 Query 96817 AGAGCTATTGTAGGGGAAAACCCTGAACTACAAACAGATGAACTAAATGACTACGTGTAC 96876 | || || || || || || || ||||| || || | || || | | ||||| || Sbjct 3239 CGCGCCATCGTCGGCGAGAATCCGGAACTGCAGACCAACGAGCTGACGGCTTACGTACAC 3180 Query 96877 -GCTTCTTTTAGACATGCCGTAGAGCTAGAACAAGC-GTGGTCTAGTGAGGTACTACAAG 96934 || ||| || |||||| | ||| | | | || ||||| || || || | | Sbjct 3179 AGCGCCTTCGAG-CATGCCATCACGCT-GGAGACGCAATGGTCGTCGGAAGTGCTGGATG 3122 Query 96935 GCATTGAAGGAATTGATGTGGAAGAAATGTTAGACTATGTAAAATATCGTGCTAATAAAA 96994 |||| || || || |||||||| || ||| | ||| || || || || || || || | Sbjct 3121 GCATCGACGGCATCGATGTGGACGAGATGGTGCGCTACGTGAAGTACCGCGCCAACAAGA 3062 Query 96995 TGTTAGGGATGTTAGGTCTTCAACCAATGTATCAAGGTCAC-ACAGAAAATTCTATGACA 97053 || || ||| | ||| | | | |||| || | || || || ||| ||| | Sbjct 3061 TGGCCGGCATGCTGGGTATCGAGCGGCTGTA-CAGCGATACGACCGACAATGTGATGCCG 3003 Query 97054 TGGATTAAAGCTTACGCCGATAACTTTACAGAAACAAAAACCGACTTTTTCGAAATGCGT 97113 ||||| || || |||||||| ||||| || ||||| || |||||||| ||||| ||||| Sbjct 3002 TGGATCAAGGCCTACGCCGACAACTTCACCGAAACCAAGACCGACTTCTTCGAGATGCGC 2943 Query 97114 AACTCTAGTTACAAGAAAACAAACTTAGACAATGGGTTCGATGACTTATGAG 97165 || | ||||||||||| || ||| | ||||| || ||||| || | |||| Sbjct 2942 AATGCAAGTTACAAGAAGACCAACGTCGACAACGGCTTCGACGATCTCTGAG 2891 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433594904172912