Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13]
177,401 sequences; 1,960,317,893 total letters
Query= NC_024383.1
Length=135831
Score E
Sequences producing significant alignments: (Bits) Value
seq101107 248 8e-61
>seq101107
Length=18006
Score = 248 bits (274), Expect = 8e-61
Identities = 631/952 (66%), Gaps = 6/952 (1%)
Strand=Plus/Minus
Query 96217 AACTGGAACGATATTCGGTATCCGTCTTTCTATCGAGCTTACAAAGAGTTAACTACAAAT 96276
||||||||||| |||| ||| || || |||||||| || ||||| || | | || ||
Sbjct 3839 AACTGGAACGACATTCCGTACCCCTCGTTCTATCGGGCGTACAAGGAACTGTCGACCAAC 3780
Query 96277 TACTGGTTGCCTGATGAGGTAGATATGAAGAGCGATGCCAAACAGTACAACCACTTATCC 96336
| |||| | || || || || || |||||| || || |||||| | | |||
Sbjct 3779 TTCTGGATCCCCGACGAAGTGGACATGAAGCTGGACGCACGCCAGTACGGTGAACTGTCC 3720
Query 96337 GAAGAAGAGAAGTATGCGTTTGACTCCATTATCGGACTTTTAGCTACACTTGACTCACCC 96396
| | |||||| | || | ||||| || ||||| || | || || || || || ||
Sbjct 3719 GGACGCGAGAAGAACGCCTACGACTCGATCATCGGCCTGCTGGCCACGCTCGATTCGCCG 3660
Query 96397 CAAACACGTTTTATTTATAATATCGCAGAGTATGTCAGTGATGCCTCCGTTCATGCTATT 96456
|| || || || || || || |||| ||||| ||| ||| | ||| ||||| | |
Sbjct 3659 CAGACCCGGTTCATCTACAACGTCGCCGAGTACATCACCGATCCGGCCGCGCATGCCAAT 3600
Query 96457 ACAGCTATCATTGCACAACAAGAAGCTATTCATAATGAGAGTTATTCTTATGTACTTGCT 96516
| || ||||| | || || |||| || ||||| || || || ||||| || ||
Sbjct 3599 GCGGCGATCATCGGCCAGCAGGAAGTGATACATAACGAAAGCTACAGCTATGTGCTGGCG 3540
Query 96517 TCTATTACTAACTTACAAGAGCAGAATCGAGTATTTGAGGAAGCTAGAACACACCCTACG 96576
|| || || | | | | ||||| || || || || || | || || || ||
Sbjct 3539 TCGATCACCGATCTGCCCAACCAGAACCGGGTGTTCGAACTGGCCCGCACGCATCCGACC 3480
Query 96577 ATTATTAAACGTAATGCACCTATTATGAAGTCTTATGACGATTTCATGAATAACAAAACA 96636
|| || | || || || || || ||| || | || ||||| |||||| |||| ||
Sbjct 3479 ATCATCAGCCGCAACGCGCCGATCATGCAGGCGTACGACGACTTCATGCGCGACAAGACC 3420
Query 96637 CCTGAGAATATGGTAAAAGCTTTAGTACAATCATCTATCTTAGAGGGTATTAATTTCTAC 96696
| |||| || | || | | | || || || ||| | ||||| || || |||||
Sbjct 3419 GCGGAGACGCTGCTGAAGTCGCTGATCCAGTCGTCGATCCTGGAGGGCATCAACTTCTAT 3360
Query 96697 AGCGGTTTTGCTTACTTCTACAACCTCGTTCGTCAAAACAAGATGACGGGGACAGGTAAA 96756
||| || || || ||||||||||| || || || ||| ||||| || || || ||
Sbjct 3359 TCCGGCTTCGCCTATTTCTACAACCTGGTGCGGCAGAACCGCATGACCGGCACCGGCAAG 3300
Query 96757 ATCATTAGCTTCATTAATCGTGATGAATTAGCCCATTCGAAATTTATTTCTGAGCTAATT 96816
||||| |||||||| || || || || | |||||| | || || || ||| | ||
Sbjct 3299 ATCATCAGCTTCATCAACCGCGACGAGCTGGCCCATACCAAGTTCATCAGCGAGGTGATC 3240
Query 96817 AGAGCTATTGTAGGGGAAAACCCTGAACTACAAACAGATGAACTAAATGACTACGTGTAC 96876
| || || || || || || || ||||| || || | || || | | ||||| ||
Sbjct 3239 CGCGCCATCGTCGGCGAGAATCCGGAACTGCAGACCAACGAGCTGACGGCTTACGTACAC 3180
Query 96877 -GCTTCTTTTAGACATGCCGTAGAGCTAGAACAAGC-GTGGTCTAGTGAGGTACTACAAG 96934
|| ||| || |||||| | ||| | | | || ||||| || || || | |
Sbjct 3179 AGCGCCTTCGAG-CATGCCATCACGCT-GGAGACGCAATGGTCGTCGGAAGTGCTGGATG 3122
Query 96935 GCATTGAAGGAATTGATGTGGAAGAAATGTTAGACTATGTAAAATATCGTGCTAATAAAA 96994
|||| || || || |||||||| || ||| | ||| || || || || || || || |
Sbjct 3121 GCATCGACGGCATCGATGTGGACGAGATGGTGCGCTACGTGAAGTACCGCGCCAACAAGA 3062
Query 96995 TGTTAGGGATGTTAGGTCTTCAACCAATGTATCAAGGTCAC-ACAGAAAATTCTATGACA 97053
|| || ||| | ||| | | | |||| || | || || || ||| ||| |
Sbjct 3061 TGGCCGGCATGCTGGGTATCGAGCGGCTGTA-CAGCGATACGACCGACAATGTGATGCCG 3003
Query 97054 TGGATTAAAGCTTACGCCGATAACTTTACAGAAACAAAAACCGACTTTTTCGAAATGCGT 97113
||||| || || |||||||| ||||| || ||||| || |||||||| ||||| |||||
Sbjct 3002 TGGATCAAGGCCTACGCCGACAACTTCACCGAAACCAAGACCGACTTCTTCGAGATGCGC 2943
Query 97114 AACTCTAGTTACAAGAAAACAAACTTAGACAATGGGTTCGATGACTTATGAG 97165
|| | ||||||||||| || ||| | ||||| || ||||| || | ||||
Sbjct 2942 AATGCAAGTTACAAGAAGACCAACGTCGACAACGGCTTCGACGATCTCTGAG 2891
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433594904172912
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |