Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13]
177,401 sequences; 1,960,317,893 total letters
Query= NC_024450.1
Length=204054
Score E
Sequences producing significant alignments: (Bits) Value
seq33823 105 9e-18
seq9457 105 9e-18
seq58427 98.7 1e-15
>seq33823
Length=24245
Score = 105 bits (116), Expect = 9e-18
Identities = 69/76 (91%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 8657 TTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 8716
|||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||
Sbjct 18980 TTCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATT 19039
Query 8717 CCCCGACGAGGAGCAG 8732
|||||||| |||| ||
Sbjct 19040 CCCCGACGGGGAGAAG 19055
Score = 100 bits (110), Expect = 4e-16
Identities = 66/72 (92%), Gaps = 1/72 (1%)
Strand=Plus/Plus
Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 18981 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 19040
Query 11789 CCCGACGAGGAG 11800
||||||| ||||
Sbjct 19041 CCCGACGGGGAG 19052
Score = 95.1 bits (104), Expect = 2e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| ||||||||| |||||||||||||||||| | |||| |||||||| | |||||||
Sbjct 19052 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 18993
Query 139413 TACTAACGAGGA 139424
||||||||||||
Sbjct 18992 TACTAACGAGGA 18981
>seq9457
Length=37269
Score = 105 bits (116), Expect = 9e-18
Identities = 67/73 (92%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 8657 TTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 8716
|||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||
Sbjct 8877 TTCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATT 8818
Query 8717 CCCCGACGAGGAG 8729
|||||||| ||||
Sbjct 8817 CCCCGACGGGGAG 8805
Score = 100 bits (110), Expect = 4e-16
Identities = 66/72 (92%), Gaps = 1/72 (1%)
Strand=Plus/Minus
Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 8876 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 8817
Query 11789 CCCGACGAGGAG 11800
||||||| ||||
Sbjct 8816 CCCGACGGGGAG 8805
Score = 95.1 bits (104), Expect = 2e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| ||||||||| |||||||||||||||||| | |||| |||||||| | |||||||
Sbjct 8805 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 8864
Query 139413 TACTAACGAGGA 139424
||||||||||||
Sbjct 8865 TACTAACGAGGA 8876
>seq58427
Length=14612
Score = 98.7 bits (108), Expect = 1e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||||||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 9711 TCCTCGTTAGTATAGTGGGGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 9652
Query 8718 CCCGACGAGGAG 8729
||||||| ||||
Sbjct 9651 CCCGACGGGGAG 9640
Score = 96.9 bits (106), Expect = 5e-15
Identities = 66/73 (90%), Gaps = 1/73 (1%)
Strand=Plus/Minus
Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
|||||||||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 9711 TCCTCGTTAGTATAGTGGGGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 9652
Query 11789 CCCGACGAGGAGG 11801
||||||| |||||
Sbjct 9651 CCCGACGGGGAGG 9639
Score = 91.5 bits (100), Expect = 2e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| ||||||||| |||||||||||||||||| | |||| |||||||| | ||||||
Sbjct 9640 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCCCCACTA 9699
Query 139413 TACTAACGAGGAT 139425
|||||||||||||
Sbjct 9700 TACTAACGAGGAT 9712
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 651397108495440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |