Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13]
177,401 sequences; 1,960,317,893 total letters
Query= NC_024696.1
Length=180800
Score E
Sequences producing significant alignments: (Bits) Value
seq113390 282 5e-71
seq41520 149 7e-31
seq79867 91.5 2e-13
>seq113390
Length=24774
Score = 282 bits (312), Expect = 5e-71
Identities = 628/939 (67%), Gaps = 9/939 (1%)
Strand=Plus/Minus
Query 162059 CCAGGGACTTATGTCGGAGATACTCGTCTAGACACTGGACCGCGAACACGTCTCGTTCCT 162118
|||||| || || | |||| || |||| |||||||| || || | ||| |||
Sbjct 8039 CCAGGGCTTTCTGCCTTAGATGTTCATCTAAACACTGGATGGCAAAGAAGTCAATGTCCA 7980
Query 162119 CATCGAACTTGTTCGCGAACAGGTGATGCGAGTTCTTCAATATCCAATTAAGATCCCCCG 162178
| || ||||| || || || | ||| || ||| || |||||| || | || || |
Sbjct 7979 CGTCAAACTTATTGGCAAATAAGTGGTG---GTTGCGCAGTATCCAGTTCAAGTCACCTG 7923
Query 162179 ATCCGAACACGCACACGGACCGCACGTGCACGCCGCTGCACGGCGGATACAGGGCCCCAT 162238
|||||| || |||||||| ||||| || || |||||||| || ||||| ||||||| |
Sbjct 7922 CTCCGAAAACACACACGGAGCGCACATGGACACCGCTGCAGGGTGGATAGGGGGCCCCCT 7863
Query 162239 CGTCCACATCCCCCTCGTAGTATTGCCACTTAACGAACCTAGTGATAGCCTGCATGTCGG 162298
| | || || || |||| |||||||| || ||||||| || ||||||||||| |
Sbjct 7862 TGGAAATGTCACCTTCAAAGTACTGCCACTTGACAAACCTAGCAATTGCCTGCATGTCAG 7803
Query 162299 AGGTGTCGTACTTGTACACTGACGGCACGGCTCCAGGAACACCCGGCAGTCTCTGTAGAG 162358
| |||| ||||||| | | | || | || ||||| | || | ||||| | ||
Sbjct 7802 ACATGTCATACTTGTGGCTTAAGGACAATGAGCCTGGAACTTCAGGGATCCTCTGAATAG 7743
Query 162359 TAGCCCACAGGTGTTCGTCTGGACTATACGTCTCCTTCGACCACTCCATGAACTCCCTGA 162418
| ||||| || | ||||| || || || || || || | ||||||||| |||| | ||
Sbjct 7742 TGGCCCAGAGATACTCGTCCGGGCTGTATGTGTCTTTTGCCCACTCCATAAACTTCTGGA 7683
Query 162419 CCGTTTTATCGTATAGAATGTAAGAGACGTAGGACCTGGTCACAATAAAGTACGCGCTAC 162478
||| || | ||||| || || || ||| | || | ||| || || || |
Sbjct 7682 TTTTTTCATTCTCTAGAACATACTCCACATACTTCCTACTGACCACAAAATAGGCACTGC 7623
Query 162479 CAGAAAACACGGGTATGCGTATAGGAGGGGGCTCTTTGTCTTGACCCGTGTTGACTACCA 162538
| ||||||| ||| | | |||||||||| |||||| ||||| || |
Sbjct 7622 CTGAAAACAGAGGTGTTTCAAGAGGAGGGGGCATTTTGTCAGTCCCCGTATTTGTGAGTT 7563
Query 162539 TTCCCTCTACGACCACGTGTCTCTTCCTCCACCTGGCCATCTTACTGGTAGACGGGTGTT 162598
|||| || | || | | || ||||||| | | ||| || | | | |
Sbjct 7562 TTCCATCAAAGATTGCATAATGTTTTTTCCACCTTTCTTTTTTATGGGATGGCATTTTCT 7503
Query 162599 CGGTCTCTAGACTGTTACGACCCCCCAAGGCCTTCAGCTGACGCACCATCTCTAGATTGG 162658
| || || || |||| ||| || | ||| || | | || || || || ||||
Sbjct 7502 CTGTTTCCAGGTTGTTTTCTCCCATTAACGACTTGAGTTTCCTGACAATTTCCAGGTTGG 7443
Query 162659 TCTTAAGGGGAAAGTCGGTGCCGCAGAGATTAATAACATATTTCCACTTAACGCTGAGTC 162718
| |||| ||||| || | || |||||||| || | || ||||| | | | | ||
Sbjct 7442 TTTTAATAGGAAAATCCATACCACAGAGATTTATCAAGTACTTCCAATCTGCATTCATTC 7383
Query 162719 CGTACAGATCCTGTAGACAGTTCAGATCGGCCTGGACGCGACTCCACGACGCGTACACGA 162778
||| || ||||| | |||||| || |||||||| || |||||||| || || ||||| |
Sbjct 7382 TGTAGAGGTCCTGCATACAGTTGAGGTCGGCCTGAACCCGACTCCATGATGCATACACCA 7323
Query 162779 CGCTCTCCAACCTAGTGGCGACAAAGACATTGTCGAAACACGAAACTATCCCCATCACGG 162838
| |||||| | | |||| ||||||||||| |||||| || | || || |||| |
Sbjct 7322 CAGTCTCCAGCTGACTGGCCACAAAGACATTACTGAAACAGGATGCAATACCAGTCACTG 7263
Query 162839 CCAGTGAGAA---CATCGGGTCCGCTTTCCTATCTACGTGTACGCAGTATAGATTCTGAG 162895
|| | |||| ||| |||| ||| || || || || | |||||| | ||||||||
Sbjct 7262 CC-GCCAGAAAGGAATC--CTCCGATTTTCTGTCCACATGAATGCAGTAGAAATTCTGAG 7206
Query 162896 GGGCGTAGATGGCCCTCAGTAATCTCTCGAACATCTCTATCTTATGGTGTACCACGATAG 162955
| |||||||||||||| | || || | ||| || || || || || ||||| || |
Sbjct 7205 GCATATAGATGGCCCTCAGGAGCCTGTCAAGCATTTCAATTTTGTGATGAACCACTATGG 7146
Query 162956 AATACGCTATGGGGAACTCAGCCTCCTCGCGACTGAGAG 162994
|||| ||||| || ||||| || || || ||| ||||
Sbjct 7145 AATATGCTATTGGAAACTCTGCTTCTTCTTTACTAAGAG 7107
>seq41520
Length=21859
Score = 149 bits (164), Expect = 7e-31
Identities = 220/312 (71%), Gaps = 0/312 (0%)
Strand=Plus/Plus
Query 171771 CATAGAGTGTCAGACAGGTCTTACCCGATATTTTTCCGGACCCAAAAGTATTAAACAAAC 171830
|| |||| || || |||| | || | || || |||| || ||||||||||| | |
Sbjct 20336 CAAAGAGAGTGAGGCAGGCTATTCCTGCGATCTTCCCGGCACCGAAAGTATTAAAGAGGC 20395
Query 171831 ACATAAAACAGCCTTCGTCCTCCACGGTGGTGTTCCAAAAAGTCAATGTAGAATTTCTGA 171890
|| | |||| ||||| ||||||| ||||| ||||| || || | || || || | |
Sbjct 20396 ACTTGTAACACCCTTCATCCTCCAGAGTGGTATTCCAGAAGGTAATGGTTGAGTTCCGAA 20455
Query 171891 GTCCGAGTTGCGTAATGTTCACCCGGTCCTTGTACGGAGGCTGGACGACAACACCGTGAT 171950
|||| || | || ||||||| | | ||| || |||||||||| ||||| || || |
Sbjct 20456 GTCCCAGCTCAGTTATGTTCATCTTATTCTTATAACGAGGCTGGACCACAACCCCATGTT 20515
Query 171951 TCTCGCTGAACGTGGCCATGTTTTCGGGGCTCGTAGCCTTTATCTTCTGCCACGTTACTA 172010
| |||||| || |||||||||| ||| | ||||| || |||||||| || || |
Sbjct 20516 CATTGCTGAAGGTAACCATGTTTTCTGGGGTTACGGCCTTGATTTTCTGCCATGTCACAA 20575
Query 172011 TTAAAACTTCTTTGTCGGTTTGAAGAGAGCATCTTAAAGAAGCAGGTGTGTTCAATAATT 172070
| || ||||| | | | || ||| ||||| ||| |||||||||||||||| |
Sbjct 20576 TCAAGACTTCCTGGGAAGATTCCAGAAAGCATTGTAAGGAAGCAGGTGTGTTCAGCGGCT 20635
Query 172071 CCCTTTCGTCTT 172082
| |||| |||||
Sbjct 20636 CTCTTTTGTCTT 20647
Score = 113 bits (124), Expect = 5e-20
Identities = 159/223 (71%), Gaps = 3/223 (1%)
Strand=Plus/Plus
Query 171503 ACAGTTTGTCTGATGTCTGTTACAGTCCCCAAGTGTAAGACTTTGCATATCACCTCCTCG 171562
||||| || || | || || ||| |||||| ||| | || | ||| ||||||||||
Sbjct 17713 ACAGTCTGCCTAAAGTTGGTCACATTCCCCAGGTGCAGCACCTGGCAGATCACCTCCT-- 17770
Query 171563 TTTCCCACTTGACTTTTAGGATCTTTTACTTGAAGAATGCTAGTAACAGATGTAGTCCCG 171622
| ||||||||||| || |||||||| || || || | || | |||||||| |||||
Sbjct 17771 -TCCCCACTTGACTCTTGGGATCTTTGACCTGGAGGACACTGATGACAGATGTGGTCCCA 17829
Query 171623 TTACGATGTAGAACGGTTTTAGTACTATTTTCTATTCCGGATCCGGCAACTTTCCAAAAT 171682
|| | ||| | | | |||||| || || ||||| || || | || ||||| |
Sbjct 17830 TTGGGGTGTGAGATAATCTCAGTACTGTTCTCCATTCCTGACCCAGGGACCTTCCAGGAG 17889
Query 171683 ATAACAGGAGCTGGTCTAGCAGTAGCAGAGCAAGTTATGTTTA 171725
|| ||||| ||||| | ||| | ||||||||||| || ||||
Sbjct 17890 ATCACAGGGGCTGGGCGGGCATTGGCAGAGCAAGTGATATTTA 17932
>seq79867
Length=81550
Score = 91.5 bits (100), Expect = 2e-13
Identities = 225/336 (67%), Gaps = 8/336 (2%)
Strand=Plus/Plus
Query 162643 ACCATCTCTAGATTGGTCTTAAGGGGAAAGTCGGTGCCGCAGAGATTAATAACATATTTC 162702
|||||||| ||||||||| | |||||||| || || || ||| | | ||||||
Sbjct 73308 ACCATCTCAGCATTGGTCTTTATAGGAAAGTCTGTTCCACACGTATTTAGGAAGTATTTC 73367
Query 162703 CACTTAACGCTGAG-TCCGTA-CAGATCCTGTAGACAGTTCAGATCGGCCTGGACGCGAC 162760
|| | | ||||| || | | ||| || | | ||||||||| || || || || |
Sbjct 73368 CA--TGGCACTGAGCTCTGAAGCAGGTCTTCCATACAGTTCAGGTCAGCTTGTACCCTGG 73425
Query 162761 TCCACGACGCGTACACGACGCTCTCCAACCTAGTGGCGACAAAGACATTGTCGAAACACG 162820
||| || || || || || | ||||| || |||| | || ||||| ||| || |
Sbjct 73426 ACCAGGAGGCATAAACCACTCGAACCAACTTACTGGCCAGGAAAACATTTGGGAAGCATG 73485
Query 162821 AAACTATCCCCATCACGGCCAGTGAGAACAT--CGGGTCCGCTTTCCTATCTACGTGTAC 162878
||| || || |||| ||| | ||| | | || | |||| ||| || || ||
Sbjct 73486 AAATAATTGCCTTCACTGCCTCTTTGAAAGTTTCTGGG--GATTTCTCATCCACATGCAC 73543
Query 162879 GCAGTATAGATTCTGAGGGGCGTAGATGGCCCTCAGTAATCTCTCGAACATCTCTATCTT 162938
|| |||| |||||||||||| || | || ||||| | || || || | || |||||
Sbjct 73544 ACAATATATATTCTGAGGGGCATACACAGCTCTCAGCAGCCTTTCAAAGTTTTCAATCTT 73603
Query 162939 ATGGTGTACCACGATAGAATACGCTATGGGGAACTC 162974
| || ||||| ||||| || || || ||||| ||
Sbjct 73604 CTCATGGACCACCATAGAGTATGCAATAGGGAAGTC 73639
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 577149319809600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |