Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_024787.1 Length=132541 Score E Sequences producing significant alignments: (Bits) Value seq101107 241 1e-58 >seq101107 Length=18006 Score = 241 bits (266), Expect = 1e-58 Identities = 627/951 (66%), Gaps = 4/951 (0%) Strand=Plus/Minus Query 98796 AACTGGAACGATATTCGGTATCCGTCTTTCTATCGAGCTTACAAAGAGTTAACTACAAAT 98855 ||||||||||| |||| ||| || || |||||||| || ||||| || | | || || Sbjct 3839 AACTGGAACGACATTCCGTACCCCTCGTTCTATCGGGCGTACAAGGAACTGTCGACCAAC 3780 Query 98856 TACTGGTTGCCTGATGAGGTAGATATGAAGAGCGATGCCAAACAGTACAACCACTTATCC 98915 | |||| | || || || || || |||||| || || |||||| | | ||| Sbjct 3779 TTCTGGATCCCCGACGAAGTGGACATGAAGCTGGACGCACGCCAGTACGGTGAACTGTCC 3720 Query 98916 GAAGAAGAGAAGTATGCGTTTGACTCCATTATCGGACTTTTAGCTACACTTGACTCACCC 98975 | | |||||| | || | ||||| || ||||| || | || || || || || || Sbjct 3719 GGACGCGAGAAGAACGCCTACGACTCGATCATCGGCCTGCTGGCCACGCTCGATTCGCCG 3660 Query 98976 CAAACACGTTTTATTTATAACATTGCAGAGTATGTCAGTGATGCCTCCGTTCATGCTATT 99035 || || || || || || ||| | || ||||| ||| ||| | ||| ||||| | | Sbjct 3659 CAGACCCGGTTCATCTACAACGTCGCCGAGTACATCACCGATCCGGCCGCGCATGCCAAT 3600 Query 99036 ACAGCTATCATTGCACAACAAGAAGCTATTCATAATGAGAGTTATTCTTATGTACTTGCT 99095 | || ||||| | || || |||| || ||||| || || || ||||| || || Sbjct 3599 GCGGCGATCATCGGCCAGCAGGAAGTGATACATAACGAAAGCTACAGCTATGTGCTGGCG 3540 Query 99096 TCTATTACTAACTTACAAGAGCAGAATCGAGTATTTGAGGAAGCTAGAACACACCCTACG 99155 || || || | | | | ||||| || || || || || | || || || || Sbjct 3539 TCGATCACCGATCTGCCCAACCAGAACCGGGTGTTCGAACTGGCCCGCACGCATCCGACC 3480 Query 99156 ATTATTAAACGTAATGCACCTATTATGAAGTCTTATGACGATTTCATGAATAACAAAACA 99215 || || | || || || || || ||| || | || ||||| |||||| |||| || Sbjct 3479 ATCATCAGCCGCAACGCGCCGATCATGCAGGCGTACGACGACTTCATGCGCGACAAGACC 3420 Query 99216 CCTGAGAATATGGTAAAAGCTTTAGTACAATCATCTATCTTAGAGGGTATTAATTTCTAC 99275 | |||| || | || | | | || || || ||| | ||||| || || ||||| Sbjct 3419 GCGGAGACGCTGCTGAAGTCGCTGATCCAGTCGTCGATCCTGGAGGGCATCAACTTCTAT 3360 Query 99276 AGCGGTTTTGCTTACTTCTATAACCTTGTTCGTCAAAACAAGATGACGGGAACAGGTAAA 99335 ||| || || || ||||| ||||| || || || ||| ||||| || || || || Sbjct 3359 TCCGGCTTCGCCTATTTCTACAACCTGGTGCGGCAGAACCGCATGACCGGCACCGGCAAG 3300 Query 99336 ATCATTAGCTTCATTAATCGTGATGAGTTAGCCCATTCGAAGTTTATTTCTGAGCTAATT 99395 ||||| |||||||| || || || ||| | |||||| | ||||| || ||| | || Sbjct 3299 ATCATCAGCTTCATCAACCGCGACGAGCTGGCCCATACCAAGTTCATCAGCGAGGTGATC 3240 Query 99396 AGAGCTATTGTAGGGGAAAACCCTGAACTACAAACAGATGAACTAAATGACTACGTGTAT 99455 | || || || || || || || ||||| || || | || || | | ||||| | Sbjct 3239 CGCGCCATCGTCGGCGAGAATCCGGAACTGCAGACCAACGAGCTGACGGCTTACGTACAC 3180 Query 99456 -GCTTCTTTTAGACATGCCGTAGAGCTAGAACAAGCG-TGGTCTAGTGAGGTACTACAGG 99513 || ||| || |||||| | ||| || | || ||||| || || || | | Sbjct 3179 AGCGCCTTCGAG-CATGCCATCACGCTGGAG-ACGCAATGGTCGTCGGAAGTGCTGGATG 3122 Query 99514 GCATTGAAGGAATTGATGTGGAAGAAATGTTAGACTATGTAAAATATCGTGCTAATAAAA 99573 |||| || || || |||||||| || ||| | ||| || || || || || || || | Sbjct 3121 GCATCGACGGCATCGATGTGGACGAGATGGTGCGCTACGTGAAGTACCGCGCCAACAAGA 3062 Query 99574 TGTTAGGGATGCTAGGTCTCCAACCAATGTATCAAGGTCATACAGAAAATTCTATGACAT 99633 || || ||||| ||| || | | |||| | | || || ||| ||| | | Sbjct 3061 TGGCCGGCATGCTGGGTATCGAGCGGCTGTACAGCGATACGACCGACAATGTGATGCCGT 3002 Query 99634 GGATTAAAGCTTACGCCGATAATTTTACAGAAACAAAAACCGACTTTTTCGAAATGCGTA 99693 |||| || || |||||||| || || || ||||| || |||||||| ||||| ||||| | Sbjct 3001 GGATCAAGGCCTACGCCGACAACTTCACCGAAACCAAGACCGACTTCTTCGAGATGCGCA 2942 Query 99694 ACTCTAGTTACAAGAAAACAAATTTAGATAATGGGTTCGATGACTTATGAG 99744 | | ||||||||||| || || | || || || ||||| || | |||| Sbjct 2941 ATGCAAGTTACAAGAAGACCAACGTCGACAACGGCTTCGACGATCTCTGAG 2891 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 423089666495222