Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13]
177,401 sequences; 1,960,317,893 total letters
Query= NC_024787.1
Length=132541
Score E
Sequences producing significant alignments: (Bits) Value
seq101107 241 1e-58
>seq101107
Length=18006
Score = 241 bits (266), Expect = 1e-58
Identities = 627/951 (66%), Gaps = 4/951 (0%)
Strand=Plus/Minus
Query 98796 AACTGGAACGATATTCGGTATCCGTCTTTCTATCGAGCTTACAAAGAGTTAACTACAAAT 98855
||||||||||| |||| ||| || || |||||||| || ||||| || | | || ||
Sbjct 3839 AACTGGAACGACATTCCGTACCCCTCGTTCTATCGGGCGTACAAGGAACTGTCGACCAAC 3780
Query 98856 TACTGGTTGCCTGATGAGGTAGATATGAAGAGCGATGCCAAACAGTACAACCACTTATCC 98915
| |||| | || || || || || |||||| || || |||||| | | |||
Sbjct 3779 TTCTGGATCCCCGACGAAGTGGACATGAAGCTGGACGCACGCCAGTACGGTGAACTGTCC 3720
Query 98916 GAAGAAGAGAAGTATGCGTTTGACTCCATTATCGGACTTTTAGCTACACTTGACTCACCC 98975
| | |||||| | || | ||||| || ||||| || | || || || || || ||
Sbjct 3719 GGACGCGAGAAGAACGCCTACGACTCGATCATCGGCCTGCTGGCCACGCTCGATTCGCCG 3660
Query 98976 CAAACACGTTTTATTTATAACATTGCAGAGTATGTCAGTGATGCCTCCGTTCATGCTATT 99035
|| || || || || || ||| | || ||||| ||| ||| | ||| ||||| | |
Sbjct 3659 CAGACCCGGTTCATCTACAACGTCGCCGAGTACATCACCGATCCGGCCGCGCATGCCAAT 3600
Query 99036 ACAGCTATCATTGCACAACAAGAAGCTATTCATAATGAGAGTTATTCTTATGTACTTGCT 99095
| || ||||| | || || |||| || ||||| || || || ||||| || ||
Sbjct 3599 GCGGCGATCATCGGCCAGCAGGAAGTGATACATAACGAAAGCTACAGCTATGTGCTGGCG 3540
Query 99096 TCTATTACTAACTTACAAGAGCAGAATCGAGTATTTGAGGAAGCTAGAACACACCCTACG 99155
|| || || | | | | ||||| || || || || || | || || || ||
Sbjct 3539 TCGATCACCGATCTGCCCAACCAGAACCGGGTGTTCGAACTGGCCCGCACGCATCCGACC 3480
Query 99156 ATTATTAAACGTAATGCACCTATTATGAAGTCTTATGACGATTTCATGAATAACAAAACA 99215
|| || | || || || || || ||| || | || ||||| |||||| |||| ||
Sbjct 3479 ATCATCAGCCGCAACGCGCCGATCATGCAGGCGTACGACGACTTCATGCGCGACAAGACC 3420
Query 99216 CCTGAGAATATGGTAAAAGCTTTAGTACAATCATCTATCTTAGAGGGTATTAATTTCTAC 99275
| |||| || | || | | | || || || ||| | ||||| || || |||||
Sbjct 3419 GCGGAGACGCTGCTGAAGTCGCTGATCCAGTCGTCGATCCTGGAGGGCATCAACTTCTAT 3360
Query 99276 AGCGGTTTTGCTTACTTCTATAACCTTGTTCGTCAAAACAAGATGACGGGAACAGGTAAA 99335
||| || || || ||||| ||||| || || || ||| ||||| || || || ||
Sbjct 3359 TCCGGCTTCGCCTATTTCTACAACCTGGTGCGGCAGAACCGCATGACCGGCACCGGCAAG 3300
Query 99336 ATCATTAGCTTCATTAATCGTGATGAGTTAGCCCATTCGAAGTTTATTTCTGAGCTAATT 99395
||||| |||||||| || || || ||| | |||||| | ||||| || ||| | ||
Sbjct 3299 ATCATCAGCTTCATCAACCGCGACGAGCTGGCCCATACCAAGTTCATCAGCGAGGTGATC 3240
Query 99396 AGAGCTATTGTAGGGGAAAACCCTGAACTACAAACAGATGAACTAAATGACTACGTGTAT 99455
| || || || || || || || ||||| || || | || || | | ||||| |
Sbjct 3239 CGCGCCATCGTCGGCGAGAATCCGGAACTGCAGACCAACGAGCTGACGGCTTACGTACAC 3180
Query 99456 -GCTTCTTTTAGACATGCCGTAGAGCTAGAACAAGCG-TGGTCTAGTGAGGTACTACAGG 99513
|| ||| || |||||| | ||| || | || ||||| || || || | |
Sbjct 3179 AGCGCCTTCGAG-CATGCCATCACGCTGGAG-ACGCAATGGTCGTCGGAAGTGCTGGATG 3122
Query 99514 GCATTGAAGGAATTGATGTGGAAGAAATGTTAGACTATGTAAAATATCGTGCTAATAAAA 99573
|||| || || || |||||||| || ||| | ||| || || || || || || || |
Sbjct 3121 GCATCGACGGCATCGATGTGGACGAGATGGTGCGCTACGTGAAGTACCGCGCCAACAAGA 3062
Query 99574 TGTTAGGGATGCTAGGTCTCCAACCAATGTATCAAGGTCATACAGAAAATTCTATGACAT 99633
|| || ||||| ||| || | | |||| | | || || ||| ||| | |
Sbjct 3061 TGGCCGGCATGCTGGGTATCGAGCGGCTGTACAGCGATACGACCGACAATGTGATGCCGT 3002
Query 99634 GGATTAAAGCTTACGCCGATAATTTTACAGAAACAAAAACCGACTTTTTCGAAATGCGTA 99693
|||| || || |||||||| || || || ||||| || |||||||| ||||| ||||| |
Sbjct 3001 GGATCAAGGCCTACGCCGACAACTTCACCGAAACCAAGACCGACTTCTTCGAGATGCGCA 2942
Query 99694 ACTCTAGTTACAAGAAAACAAATTTAGATAATGGGTTCGATGACTTATGAG 99744
| | ||||||||||| || || | || || || ||||| || | ||||
Sbjct 2941 ATGCAAGTTACAAGAAGACCAACGTCGACAACGGCTTCGACGATCTCTGAG 2891
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 423089666495222
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |