Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq79216 104 2e-17 seq8818 95.1 8e-15 seq548 95.1 8e-15 seq104034 93.3 3e-14 seq85393 93.3 3e-14 seq161317 91.5 1e-13 seq97981 89.7 3e-13 >seq79216 Length=33065 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||||||||||| || | |||| || || ||| |||||| || |||||||| || || Sbjct 3634 ACCACCTCTCAGGCGCAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGA 3693 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || ||||| | || |||| || || || ||||| || | | |||||| ||| | || Sbjct 3694 AAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCTGGGGG 3753 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||||| || || || || |||| |||| || | ||||||||| | |||| Sbjct 3754 GATGCCTTCCTTATCTTGGATCTTGGCTTTC-ACATTCTCAATGGTGTCGCTGGGCTCCA 3812 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || | ||||| || || ||||| | || || |||||||||||||| Sbjct 3813 CCTCCAGGGTGATGGTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 3861 Score = 91.5 bits (100), Expect = 1e-13 Identities = 159/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 |||||||||| || | |||| || || ||| |||||| || |||||||| || || Sbjct 3407 CCACCTCTCAGGCGCAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAA 3466 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || ||||| | || |||| || || || ||||| || | | |||||| || | || Sbjct 3467 AGAGTGCGGCCATCCTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGGG 3526 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCAC 33701 | |||||||| || || || |||| ||| ||| ||||||||| | ||||| Sbjct 3527 ATGCCTTCTTTATCCTGGATCTTGGCCTTCA-CATTCTCAATGGTGTCGCTCGGCTCCAC 3585 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || | ||||| || || || || | || || || |||||||||||| Sbjct 3586 CTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCATA 3634 >seq8818 Length=48227 Score = 95.1 bits (104), Expect = 8e-15 Identities = 162/232 (70%), Gaps = 6/232 (3%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCT----CTCTTTTTGTATGTTGTAATC 33578 |||| | || ||| | |||||| || || ||| |||||| || |||||||| || Sbjct 8701 CCACTACGCAGACGAAGCACCAAGTGCAGCGTGGAGGGACTCTTTCTGAATGTTGTAGTC 8760 Query 33579 GGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTG 33638 ||||| ||||| | || |||| |||| || |||||||||| |||||||| || | Sbjct 8761 CGAGAGAGTGCGGCCATCCTCCAGCCGTTTGCCCGCAAAAATCAGTCGCTGCTGGTCAGG 8820 Query 33639 CGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATT 33697 ||| | || || ||||| ||||| ||| | ||| ||| |||||| || | | Sbjct 8821 CGGGATGCCCTCCTTGTCTTGGATTTTAGCTTTGA-CATTCTCAGTGGTGTCACTGGGCT 8879 Query 33698 CCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || |||| ||||| || || | || | || || |||||||||||||| Sbjct 8880 CAACCTCAAGGGTGATGGTCTTGCTAGTCAGGGTCTTCACAAAGATCTGCAT 8931 >seq548 Length=19863 Score = 95.1 bits (104), Expect = 8e-15 Identities = 158/226 (70%), Gaps = 2/226 (1%) Strand=Plus/Minus Query 33525 ACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAG 33584 ||| | || ||| | |||||| || || ||| |||||| || |||||||| || ||||| Sbjct 10980 ACCCCACAGACGAAGCACCAAGTGCAGGGTGGACTCTTTCTGAATGTTGTAGTCCGAGAG 10921 Query 33585 TGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCAC 33644 |||| | || |||| ||||| || |||| |||| | |||||| || | || | Sbjct 10920 AGTGCAGCCATCCTCCAGCTGTTTGCCCACAAACATCAGTCACTGCTGGTCAGGTGGGAT 10861 Query 33645 ACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCACGT 33703 || || ||||| ||||| ||| | ||| ||| |||||| || | || || | Sbjct 10860 GCCCTCCTTGTCTTGGATTTTAGCTTTGA-CATTCTCAATGGTGTCACTGGGCTCGACCT 10802 Query 33704 CAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 ||| ||||| || || || || | || || |||||||||||||| Sbjct 10801 CAAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 10756 >seq104034 Length=7476 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| | || | | | |||||| || || ||| |||||| || ||| |||| || | Sbjct 2084 CCACCACGCAGATGAAGCACCAAGTGCAGTGTGGACTCTTTCTGAATGATGTAGTCCAGG 2025 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || ||||| | || |||| |||| || |||||||||| |||||||| || |||| Sbjct 2024 AGAGTGCGGCCATCTTCCAGCTGTTGGCCTGCAAAAATCAGTCGCTGCTGGTCAGGCGGG 1965 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCAC 33701 | || || |||| ||||| ||| | ||| ||| |||||| || | || || Sbjct 1964 ATGCCCTCCTTGTTTTTGATTTTAGCTTTGA-CATTCTCAGTGGTGTCACTGGGCTCAAC 1906 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 |||| ||||| || || || || | || || |||||||||||||| Sbjct 1905 CTCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 1858 >seq85393 Length=7687 Score = 93.3 bits (102), Expect = 3e-14 Identities = 148/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 33541 ACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCC 33600 ||||| || |||||| |||||| || |||| || || ||||| ||||| | || ||| Sbjct 5670 ACCAAGTGCAGAGTGGACTCTTTCTGAGTGTTTTAGTCCGAGAGAGTGCGGCCATCTTCC 5611 Query 33601 AATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCA 33660 | ||||| || |||||||||| |||||||| || |||| | || || ||||| Sbjct 5610 AGCTGTTTGCCTGCAAAAATCAGTCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCTTAG 5551 Query 33661 ATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTT 33719 ||||| ||| | | | ||| |||||| || | || || |||| | |||| | || Sbjct 5550 ATTTTACCTTTGA-CGTTCTCAGTGGTGTCACTGGGCTCAACCTCAAGCATGATGATCTT 5492 Query 33720 ACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || || | | || |||||||||||||| Sbjct 5491 GCCAGTCAGGGCCTTCACAAAGATCTGCAT 5462 >seq161317 Length=2104 Score = 91.5 bits (100), Expect = 1e-13 Identities = 144/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606 || |||||| ||| || || ||||||||||| ||||| ||||| |||| || | || Sbjct 1840 TGAAGAGTGGACTCCTTCTGAATGTTGTAATCAGAGAGAGTGCGGCCGTCCTCAAGCTGC 1899 Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTC 33666 || ||||| |||||||| || ||||| || | || | || || ||||| ||| || Sbjct 1900 TTGCCGGCGAAAATCAAGCGTTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGAATCTT- 1958 Query 33667 TGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGT 33725 | | |||| ||| | |||||| || || || || | ||||| || || || || Sbjct 1959 GGACTTGACATTGTCGATAGTGTCGGAAGACTCAACCTCGAGGGTGATGGTCTTGCCGGT 2018 Query 33726 TAACGTTTTTACAAAGATCTGCAT 33749 || || || || ||||||||||| Sbjct 2019 CAAGGTCTTGACGAAGATCTGCAT 2042 >seq97981 Length=9611 Score = 89.7 bits (98), Expect = 3e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| | || ||| | |||||| || || ||| |||||| || |||||||| || || Sbjct 2469 CCACCCCACAGACGAAGCACCAACTGCAGGGTGGACTCTTTCTGAATGTTGTAGTCTGAA 2528 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || || || || |||| ||||| || ||||||| || ||||||||| || || Sbjct 2529 AGAGTATAATCATCTTCCAGCTGTTTGCCTGCAAAAACCAGACGCTGCTGGTCAGAAGGG 2588 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCACGGTGTCGCTTGATTCCACG 33702 | || || ||||| ||||| ||| | || | |||||| || | || || Sbjct 2589 ATGCCCTCCTTGTCTTGGATTTTAGCTTTGACAATCTCAATGGTGTCACTGGGCTCAACC 2648 Query 33703 TCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | ||||| || || || || | || ||| ||||||||||||| Sbjct 2649 TCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTTGCAAAGATCTGCAT 2695 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 327993317401920