Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_025440.1 Length=134369 Score E Sequences producing significant alignments: (Bits) Value seq101107 244 9e-60 >seq101107 Length=18006 Score = 244 bits (270), Expect = 9e-60 Identities = 630/952 (66%), Gaps = 6/952 (1%) Strand=Plus/Plus Query 75663 CTCATAAGTCATCGAACCCATTGTCTAAGTTTGTTTTCTTGTAACTAGAGTTACGCATTT 75722 |||| | || ||||| || ||||| | ||| || ||||||||||| | || ||||| | Sbjct 2891 CTCAGAGATCGTCGAAGCCGTTGTCGACGTTGGTCTTCTTGTAACTTGCATTGCGCATCT 2950 Query 75723 CGAAAAAGTCGGTTTTTGTTTCTGTAAAGTTATCGGCGTAAGCTTTAATCCATGTCATAG 75782 |||| |||||||| || ||||| || ||||| |||||||| || || ||||| | ||| Sbjct 2951 CGAAGAAGTCGGTCTTGGTTTCGGTGAAGTTGTCGGCGTAGGCCTTGATCCACGGCATCA 3010 Query 75783 AATTTTCTGT-GTGACCTTGATACATTGGTTGAAGACCTAGCATCCCTAACATTTTATTA 75841 ||| || || || | || |||| | | | ||| ||||| || ||| || || Sbjct 3011 CATTGTCGGTCGTATCGCTG-TACAGCCGCTCGATACCCAGCATGCCGGCCATCTTGTTG 3069 Query 75842 GCACGATATTTTACATAGTCTAACATCTCTTCCACATCAATTCCTTCAATGCCCTGTAGT 75901 || || || || || ||| | |||||| |||||||| || || || ||||| | || Sbjct 3070 GCGCGGTACTTCACGTAGCGCACCATCTCGTCCACATCGATGCCGTCGATGCCATCCAGC 3129 Query 75902 ACCTCACTAGACCA-CGCTTGTTCTAGCTCTACGGCATGTCTAAAAGAAGC-ATACACGT 75959 || || ||||| || | || ||| | |||||| || ||| || | |||| Sbjct 3130 ACTTCCGACGACCATTGCGT-CTCCAGCGTGATGGCATG-CTCGAAGGCGCTGTGTACGT 3187 Query 75960 AGTCATTTAGTTCATCTGTTTGTAGTTCAGGGTTTTCCCCTACAATAGCTCTAATTAGCT 76019 | | | || || | || || ||||| || || || || || || || | || | || Sbjct 3188 AAGCCGTCAGCTCGTTGGTCTGCAGTTCCGGATTCTCGCCGACGATGGCGCGGATCACCT 3247 Query 76020 CAGAAATAAACTTCGAATGGGCTAACTCATCACGATTAATGAAGCTAATGATTTTACCTG 76079 | || ||||| | |||||| | ||| || || || |||||||| ||||| || || | Sbjct 3248 CGCTGATGAACTTGGTATGGGCCAGCTCGTCGCGGTTGATGAAGCTGATGATCTTGCCGG 3307 Query 76080 TTCCCGTCATCTTGTTTTGACGAACAAGGTTATAGAAGTAAGCAAAACCGCTGTAGAAAT 76139 | || ||||| ||| || || || ||||| ||||| || || || ||| ||||| | Sbjct 3308 TGCCGGTCATGCGGTTCTGCCGCACCAGGTTGTAGAAATAGGCGAAGCCGGAATAGAAGT 3367 Query 76140 TAATACCCTCTAAGATAGATGATTGTACTAAAGCTTTTACCATATTCTCAGGTGTTTTGT 76199 | || ||||| | ||| || || || | | | || | || |||| | || |||| Sbjct 3368 TGATGCCCTCCAGGATCGACGACTGGATCAGCGACTTCAGCAGCGTCTCCGCGGTCTTGT 3427 Query 76200 TATTCATGAAATCGTCATAAGACTTCATAATAGGTGCATTACGTTTAATAATCGTAGGGT 76259 |||||| ||||| || | || ||| || || || || || | || || || || | Sbjct 3428 CGCGCATGAAGTCGTCGTACGCCTGCATGATCGGCGCGTTGCGGCTGATGATGGTCGGAT 3487 Query 76260 GTGTTCTAGCTTCCTCAAATACTCGATTCTGCTCTTGTAAGTTAGTAATAGAAGCAAGTA 76319 | || | || || || || || ||||| | | | | || || || || || | Sbjct 3488 GCGTGCGGGCCAGTTCGAACACCCGGTTCTGGTTGGGCAGATCGGTGATCGACGCCAGCA 3547 Query 76320 CATAAGAATAACTCTCATTATGAATAGCTTCTTGTTGTGCAATAATAGCTGTAATAGCAT 76379 |||| || || || ||||| || |||| || || | || || || | | | |||| Sbjct 3548 CATAGCTGTAGCTTTCGTTATGTATCACTTCCTGCTGGCCGATGATCGCCGCATTGGCAT 3607 Query 76380 GAACAGAGGCATCACTGACATACTCTGCGATATTATAAATAAAACGTGTTTGGGGTGAGT 76439 | | | | ||| ||| ||||| |||| || || || || || || || || || | Sbjct 3608 GCGCGGCCGGATCGGTGATGTACTCGGCGACGTTGTAGATGAACCGGGTCTGCGGCGAAT 3667 Query 76440 CAAGTGTAGCTAAAAGTCCGATAATGGAGTCAAACGCATATTTCTCTTCTTCGGATAAGT 76499 | || || || | || ||||| || ||||| | || | ||||| | |||| | | Sbjct 3668 CGAGCGTGGCCAGCAGGCCGATGATCGAGTCGTAGGCGTTCTTCTCGCGTCCGGACAGTT 3727 Query 76500 GGTTGTACTGTTTGGCATCGCTCTTCATATCTACCTCATCAGGCAACCAGTAATTTGTAG 76559 |||||| || || |||||| || || || || || | |||| | || || | Sbjct 3728 CACCGTACTGGCGTGCGTCCAGCTTCATGTCCACTTCGTCGGGGATCCAGAAGTTGGTCG 3787 Query 76560 TTAACTCTTTGTAAGCTCGATAGAAAGATGGATACCGAATATCGTTCCAGTT 76611 | || ||||| || |||||||| || || ||| |||| ||||||||||| Sbjct 3788 ACAGTTCCTTGTACGCCCGATAGAACGAGGGGTACGGAATGTCGTTCCAGTT 3839 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428926619223130