Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13]
177,401 sequences; 1,960,317,893 total letters
Query= NC_025440.1
Length=134369
Score E
Sequences producing significant alignments: (Bits) Value
seq101107 244 9e-60
>seq101107
Length=18006
Score = 244 bits (270), Expect = 9e-60
Identities = 630/952 (66%), Gaps = 6/952 (1%)
Strand=Plus/Plus
Query 75663 CTCATAAGTCATCGAACCCATTGTCTAAGTTTGTTTTCTTGTAACTAGAGTTACGCATTT 75722
|||| | || ||||| || ||||| | ||| || ||||||||||| | || ||||| |
Sbjct 2891 CTCAGAGATCGTCGAAGCCGTTGTCGACGTTGGTCTTCTTGTAACTTGCATTGCGCATCT 2950
Query 75723 CGAAAAAGTCGGTTTTTGTTTCTGTAAAGTTATCGGCGTAAGCTTTAATCCATGTCATAG 75782
|||| |||||||| || ||||| || ||||| |||||||| || || ||||| | |||
Sbjct 2951 CGAAGAAGTCGGTCTTGGTTTCGGTGAAGTTGTCGGCGTAGGCCTTGATCCACGGCATCA 3010
Query 75783 AATTTTCTGT-GTGACCTTGATACATTGGTTGAAGACCTAGCATCCCTAACATTTTATTA 75841
||| || || || | || |||| | | | ||| ||||| || ||| || ||
Sbjct 3011 CATTGTCGGTCGTATCGCTG-TACAGCCGCTCGATACCCAGCATGCCGGCCATCTTGTTG 3069
Query 75842 GCACGATATTTTACATAGTCTAACATCTCTTCCACATCAATTCCTTCAATGCCCTGTAGT 75901
|| || || || || ||| | |||||| |||||||| || || || ||||| | ||
Sbjct 3070 GCGCGGTACTTCACGTAGCGCACCATCTCGTCCACATCGATGCCGTCGATGCCATCCAGC 3129
Query 75902 ACCTCACTAGACCA-CGCTTGTTCTAGCTCTACGGCATGTCTAAAAGAAGC-ATACACGT 75959
|| || ||||| || | || ||| | |||||| || ||| || | ||||
Sbjct 3130 ACTTCCGACGACCATTGCGT-CTCCAGCGTGATGGCATG-CTCGAAGGCGCTGTGTACGT 3187
Query 75960 AGTCATTTAGTTCATCTGTTTGTAGTTCAGGGTTTTCCCCTACAATAGCTCTAATTAGCT 76019
| | | || || | || || ||||| || || || || || || || | || | ||
Sbjct 3188 AAGCCGTCAGCTCGTTGGTCTGCAGTTCCGGATTCTCGCCGACGATGGCGCGGATCACCT 3247
Query 76020 CAGAAATAAACTTCGAATGGGCTAACTCATCACGATTAATGAAGCTAATGATTTTACCTG 76079
| || ||||| | |||||| | ||| || || || |||||||| ||||| || || |
Sbjct 3248 CGCTGATGAACTTGGTATGGGCCAGCTCGTCGCGGTTGATGAAGCTGATGATCTTGCCGG 3307
Query 76080 TTCCCGTCATCTTGTTTTGACGAACAAGGTTATAGAAGTAAGCAAAACCGCTGTAGAAAT 76139
| || ||||| ||| || || || ||||| ||||| || || || ||| ||||| |
Sbjct 3308 TGCCGGTCATGCGGTTCTGCCGCACCAGGTTGTAGAAATAGGCGAAGCCGGAATAGAAGT 3367
Query 76140 TAATACCCTCTAAGATAGATGATTGTACTAAAGCTTTTACCATATTCTCAGGTGTTTTGT 76199
| || ||||| | ||| || || || | | | || | || |||| | || ||||
Sbjct 3368 TGATGCCCTCCAGGATCGACGACTGGATCAGCGACTTCAGCAGCGTCTCCGCGGTCTTGT 3427
Query 76200 TATTCATGAAATCGTCATAAGACTTCATAATAGGTGCATTACGTTTAATAATCGTAGGGT 76259
|||||| ||||| || | || ||| || || || || || | || || || || |
Sbjct 3428 CGCGCATGAAGTCGTCGTACGCCTGCATGATCGGCGCGTTGCGGCTGATGATGGTCGGAT 3487
Query 76260 GTGTTCTAGCTTCCTCAAATACTCGATTCTGCTCTTGTAAGTTAGTAATAGAAGCAAGTA 76319
| || | || || || || || ||||| | | | | || || || || || |
Sbjct 3488 GCGTGCGGGCCAGTTCGAACACCCGGTTCTGGTTGGGCAGATCGGTGATCGACGCCAGCA 3547
Query 76320 CATAAGAATAACTCTCATTATGAATAGCTTCTTGTTGTGCAATAATAGCTGTAATAGCAT 76379
|||| || || || ||||| || |||| || || | || || || | | | ||||
Sbjct 3548 CATAGCTGTAGCTTTCGTTATGTATCACTTCCTGCTGGCCGATGATCGCCGCATTGGCAT 3607
Query 76380 GAACAGAGGCATCACTGACATACTCTGCGATATTATAAATAAAACGTGTTTGGGGTGAGT 76439
| | | | ||| ||| ||||| |||| || || || || || || || || || |
Sbjct 3608 GCGCGGCCGGATCGGTGATGTACTCGGCGACGTTGTAGATGAACCGGGTCTGCGGCGAAT 3667
Query 76440 CAAGTGTAGCTAAAAGTCCGATAATGGAGTCAAACGCATATTTCTCTTCTTCGGATAAGT 76499
| || || || | || ||||| || ||||| | || | ||||| | |||| | |
Sbjct 3668 CGAGCGTGGCCAGCAGGCCGATGATCGAGTCGTAGGCGTTCTTCTCGCGTCCGGACAGTT 3727
Query 76500 GGTTGTACTGTTTGGCATCGCTCTTCATATCTACCTCATCAGGCAACCAGTAATTTGTAG 76559
|||||| || || |||||| || || || || || | |||| | || || |
Sbjct 3728 CACCGTACTGGCGTGCGTCCAGCTTCATGTCCACTTCGTCGGGGATCCAGAAGTTGGTCG 3787
Query 76560 TTAACTCTTTGTAAGCTCGATAGAAAGATGGATACCGAATATCGTTCCAGTT 76611
| || ||||| || |||||||| || || ||| |||| |||||||||||
Sbjct 3788 ACAGTTCCTTGTACGCCCGATAGAACGAGGGGTACGGAATGTCGTTCCAGTT 3839
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 428926619223130
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |