Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq161317 93.3 4e-14 seq79216 84.2 2e-11 >seq161317 Length=2104 Score = 93.3 bits (102), Expect = 4e-14 Identities = 138/196 (70%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 131928 TTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGG 131987 ||||||| || ||||||||||||||||| | ||| || |||||| | ||| ||||| | Sbjct 1109 TTGACTCCTTCTGAATGTTGTAGTCGCTTAAGGTGCGACCATCTTCCAACTGCTTACCAG 1168 Query 131988 AATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCA 132047 |||| |||||||||||||| || || || || || || || ||| || |||| Sbjct 1169 CGAAGATAAGACGCTGTTGATCAGGGGGAATACCCTCCTTGTCCTGAATCTTGCTCTTCA 1228 Query 132048 ACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 132107 | || | ||| || | | ||| || || | || | || || || || ||||| | Sbjct 1229 CGTTGTCGATAGTGTCACTGGACTCGACCTCAAGGGTGATGGTCTTTCCGGTGAGAGTCT 1288 Query 132108 TTATGAAAATCTGCAT 132123 | | ||||||||||| Sbjct 1289 TCACAAAAATCTGCAT 1304 >seq79216 Length=33065 Score = 84.2 bits (92), Expect = 2e-11 Identities = 150/219 (68%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 131905 CAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACG 131964 || ||||| |||| || | | | |||||||| || ||||||||||| | || || Sbjct 3415 CAGGCGCAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCG 3474 Query 131965 CGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTC 132024 ||| || ||||| || || | | |||| || | ||| || || || || |||||||| Sbjct 3475 GCCATCCTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGGGATGCCTTC 3534 Query 132025 TTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGT 132084 |||||| || || |||| | || | || ||| |||||||||| || | || Sbjct 3535 TTTATCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCGCTCGGCTCCACCTCCAGGGT 3594 Query 132085 CAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 | || || || ||||| || || | ||| |||||||| Sbjct 3595 GATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 3633 Score = 84.2 bits (92), Expect = 2e-11 Identities = 150/219 (68%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 131905 CAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACG 131964 || ||||| |||| || | | | |||||||| || ||||||||||| | || || Sbjct 3643 CAGGCGCAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCG 3702 Query 131965 CGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTC 132024 |||||| ||||| || || | | |||| || | ||| || ||||| || |||||||| Sbjct 3703 GCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCTGGGGGGATGCCTTC 3762 Query 132025 TTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGT 132084 ||||| || || ||||| | || | || ||| | |||||||| || | || Sbjct 3763 CTTATCTTGGATCTTGGCTTTCACATTCTCAATGGTGTCGCTGGGCTCCACCTCCAGGGT 3822 Query 132085 CAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 | || || || ||||| || || | || |||||||| Sbjct 3823 GATGGTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 3861 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475554308706360