Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13]
177,401 sequences; 1,960,317,893 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq161317 93.3 4e-14
seq79216 84.2 2e-11
>seq161317
Length=2104
Score = 93.3 bits (102), Expect = 4e-14
Identities = 138/196 (70%), Gaps = 0/196 (0%)
Strand=Plus/Plus
Query 131928 TTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGG 131987
||||||| || ||||||||||||||||| | ||| || |||||| | ||| ||||| |
Sbjct 1109 TTGACTCCTTCTGAATGTTGTAGTCGCTTAAGGTGCGACCATCTTCCAACTGCTTACCAG 1168
Query 131988 AATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCA 132047
|||| |||||||||||||| || || || || || || || ||| || ||||
Sbjct 1169 CGAAGATAAGACGCTGTTGATCAGGGGGAATACCCTCCTTGTCCTGAATCTTGCTCTTCA 1228
Query 132048 ACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 132107
| || | ||| || | | ||| || || | || | || || || || ||||| |
Sbjct 1229 CGTTGTCGATAGTGTCACTGGACTCGACCTCAAGGGTGATGGTCTTTCCGGTGAGAGTCT 1288
Query 132108 TTATGAAAATCTGCAT 132123
| | |||||||||||
Sbjct 1289 TCACAAAAATCTGCAT 1304
>seq79216
Length=33065
Score = 84.2 bits (92), Expect = 2e-11
Identities = 150/219 (68%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 131905 CAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACG 131964
|| ||||| |||| || | | | |||||||| || ||||||||||| | || ||
Sbjct 3415 CAGGCGCAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCG 3474
Query 131965 CGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTC 132024
||| || ||||| || || | | |||| || | ||| || || || || ||||||||
Sbjct 3475 GCCATCCTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGGGATGCCTTC 3534
Query 132025 TTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGT 132084
|||||| || || |||| | || | || ||| |||||||||| || | ||
Sbjct 3535 TTTATCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCGCTCGGCTCCACCTCCAGGGT 3594
Query 132085 CAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
| || || || ||||| || || | ||| ||||||||
Sbjct 3595 GATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 3633
Score = 84.2 bits (92), Expect = 2e-11
Identities = 150/219 (68%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 131905 CAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACG 131964
|| ||||| |||| || | | | |||||||| || ||||||||||| | || ||
Sbjct 3643 CAGGCGCAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCG 3702
Query 131965 CGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTC 132024
|||||| ||||| || || | | |||| || | ||| || ||||| || ||||||||
Sbjct 3703 GCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCTGGGGGGATGCCTTC 3762
Query 132025 TTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGT 132084
||||| || || ||||| | || | || ||| | |||||||| || | ||
Sbjct 3763 CTTATCTTGGATCTTGGCTTTCACATTCTCAATGGTGTCGCTGGGCTCCACCTCCAGGGT 3822
Query 132085 CAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
| || || || ||||| || || | || ||||||||
Sbjct 3823 GATGGTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 3861
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475554308706360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |