Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_026594.1 Length=56537 Score E Sequences producing significant alignments: (Bits) Value seq176284 138 4e-28 seq174594 82.4 3e-11 >seq176284 Length=10592 Score = 138 bits (152), Expect = 4e-28 Identities = 284/415 (68%), Gaps = 12/415 (3%) Strand=Plus/Plus Query 36713 TCGGCCCTGCGGGCACCGGGAAGACCTTCCTGGCCATT--CACCACGGACTGCGCCTGCT 36770 ||||||| || || ||||| ||||||||||||||| | || | ||| || ||| Sbjct 9489 TCGGCCCGGCCGGTACCGGCAAGACCTTCCTGGCCGTGGCCAGCGCGGTGGAAGC--GCT 9546 Query 36771 GGAGGCCAAGGAAATCCAGCGACTCGTCATCACTCGCCCCGCCGTCGAGGCCGAGGAGAA 36830 | | | | | ||||| || || | || || || |||||||||| ||||| Sbjct 9547 GAACGAGTCGCGCGTGCAGCGCCTGATCCTGGTGCGGCCTGCGGTCGAGGCCGGCGAGAA 9606 Query 36831 GCTCGGCTACCTGCCCGGCGGCATCGAAGAGAAGATGGCTCCGTACCTGATCCCGATGCT 36890 |||||||| ||||||||||| | | ||||| | | ||| |||||| ||| || Sbjct 9607 GCTCGGCTTCCTGCCCGGCGACCTGACCCAGAAGGTCGATCCCTACCTGCGGCCGCTGTA 9666 Query 36891 GGACGCGGTGATCGACCTGGTTGGC---CCGACGATGGCCAAGCGCCTGCAGGAGACCCG 36947 ||||| || ||| || | ||| || | ||| |||| ||| || ||| || Sbjct 9667 CGACGCCCTGTACGAAATGATGGGCGTGGAGAAGGTGGTGAAGCTGCTGGAGAAGA-ACG 9725 Query 36948 CCAGCTCGAGATCGCCCCGCTGGCCTACATGCGAGGCCGAACCTTCAACGACACGTTCCT 37007 || |||||||||| |||||||| |||||||| ||||| || |||||||| ||||| | Sbjct 9726 TCA--TCGAGATCGCACCGCTGGCGTACATGCGTGGCCGCACGCTCAACGACGCGTTCGT 9783 Query 37008 CATCGCCGACGAGATGCAGAACGCCACC-CCGCGACAGGCCGCGCTGCTGGTGACCCGCC 37066 ||| |||||| ||||||| ||||| || | ||| | || | ||||||| | Sbjct 9784 GATCCTGGACGAGGCGCAGAACACCACCATCGAG-CAGATGAAGATGTTCCTGACCCGGC 9842 Query 37067 TGGGCTTCGGAACGCGGGCCGTCTTGAACGGTGACCCGGCCCAGTGCGACCTCCC 37121 |||||||||| | ||||| | | ||| |||| | ||||| |||||| || Sbjct 9843 TGGGCTTCGGCTCCACCGCCGTGGTCACCGGCGACCTGACCCAGACCGACCTGCC 9897 >seq174594 Length=7134 Score = 82.4 bits (90), Expect = 3e-11 Identities = 74/93 (80%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 19952 GTTCAACGCCCACCTCCGGGACTGCGTGGTGCTGTTCGGCGACGAGGCGTTCTACGCCGG 20011 ||||||| ||||||||| | ||||| | ||||||||| ||||||||||||| ||||| Sbjct 5857 GTTCAACTCCCACCTCCAGAACTGCATCCTGCTGTTCGCGGACGAGGCGTTCTGGGCCGG 5798 Query 20012 GGACAAGAAGCACGAGTCCATCCTGAAGACGCT 20044 |||||| | |||||| | |||||| |||| Sbjct 5797 CGACAAGGCGGGCGAGTCGGTGCTGAAGGCGCT 5765 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 180415926794238