Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13]
177,401 sequences; 1,960,317,893 total letters
Query= NC_026594.1
Length=56537
Score E
Sequences producing significant alignments: (Bits) Value
seq176284 138 4e-28
seq174594 82.4 3e-11
>seq176284
Length=10592
Score = 138 bits (152), Expect = 4e-28
Identities = 284/415 (68%), Gaps = 12/415 (3%)
Strand=Plus/Plus
Query 36713 TCGGCCCTGCGGGCACCGGGAAGACCTTCCTGGCCATT--CACCACGGACTGCGCCTGCT 36770
||||||| || || ||||| ||||||||||||||| | || | ||| || |||
Sbjct 9489 TCGGCCCGGCCGGTACCGGCAAGACCTTCCTGGCCGTGGCCAGCGCGGTGGAAGC--GCT 9546
Query 36771 GGAGGCCAAGGAAATCCAGCGACTCGTCATCACTCGCCCCGCCGTCGAGGCCGAGGAGAA 36830
| | | | | ||||| || || | || || || |||||||||| |||||
Sbjct 9547 GAACGAGTCGCGCGTGCAGCGCCTGATCCTGGTGCGGCCTGCGGTCGAGGCCGGCGAGAA 9606
Query 36831 GCTCGGCTACCTGCCCGGCGGCATCGAAGAGAAGATGGCTCCGTACCTGATCCCGATGCT 36890
|||||||| ||||||||||| | | ||||| | | ||| |||||| ||| ||
Sbjct 9607 GCTCGGCTTCCTGCCCGGCGACCTGACCCAGAAGGTCGATCCCTACCTGCGGCCGCTGTA 9666
Query 36891 GGACGCGGTGATCGACCTGGTTGGC---CCGACGATGGCCAAGCGCCTGCAGGAGACCCG 36947
||||| || ||| || | ||| || | ||| |||| ||| || ||| ||
Sbjct 9667 CGACGCCCTGTACGAAATGATGGGCGTGGAGAAGGTGGTGAAGCTGCTGGAGAAGA-ACG 9725
Query 36948 CCAGCTCGAGATCGCCCCGCTGGCCTACATGCGAGGCCGAACCTTCAACGACACGTTCCT 37007
|| |||||||||| |||||||| |||||||| ||||| || |||||||| ||||| |
Sbjct 9726 TCA--TCGAGATCGCACCGCTGGCGTACATGCGTGGCCGCACGCTCAACGACGCGTTCGT 9783
Query 37008 CATCGCCGACGAGATGCAGAACGCCACC-CCGCGACAGGCCGCGCTGCTGGTGACCCGCC 37066
||| |||||| ||||||| ||||| || | ||| | || | ||||||| |
Sbjct 9784 GATCCTGGACGAGGCGCAGAACACCACCATCGAG-CAGATGAAGATGTTCCTGACCCGGC 9842
Query 37067 TGGGCTTCGGAACGCGGGCCGTCTTGAACGGTGACCCGGCCCAGTGCGACCTCCC 37121
|||||||||| | ||||| | | ||| |||| | ||||| |||||| ||
Sbjct 9843 TGGGCTTCGGCTCCACCGCCGTGGTCACCGGCGACCTGACCCAGACCGACCTGCC 9897
>seq174594
Length=7134
Score = 82.4 bits (90), Expect = 3e-11
Identities = 74/93 (80%), Gaps = 0/93 (0%)
Strand=Plus/Minus
Query 19952 GTTCAACGCCCACCTCCGGGACTGCGTGGTGCTGTTCGGCGACGAGGCGTTCTACGCCGG 20011
||||||| ||||||||| | ||||| | ||||||||| ||||||||||||| |||||
Sbjct 5857 GTTCAACTCCCACCTCCAGAACTGCATCCTGCTGTTCGCGGACGAGGCGTTCTGGGCCGG 5798
Query 20012 GGACAAGAAGCACGAGTCCATCCTGAAGACGCT 20044
|||||| | |||||| | |||||| ||||
Sbjct 5797 CGACAAGGCGGGCGAGTCGGTGCTGAAGGCGCT 5765
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 180415926794238
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |