Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq6383 212 5e-50 seq32390 102 6e-17 seq130622 93.3 3e-14 seq176809 91.5 1e-13 >seq6383 Length=23588 Score = 212 bits (234), Expect = 5e-50 Identities = 605/919 (66%), Gaps = 16/919 (2%) Strand=Plus/Minus Query 43677 TGCTTACAGAAAATCCGTCTAGGTTTGTCGTGTTTCCAATTCAATATCATGACATATGGC 43736 |||| | ||| || || | | |||||| | || || || | || || ||||| |||| Sbjct 8146 TGCTGAGAGAGAACCCCTGCCGCTTTGTCATCTTCCCCATCGAGTACCACGACATCTGGC 8087 Query 43737 AAATGTACAAAAAAGCACAGGCGTCATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAG 43796 | |||||||| || || |||| || || |||||||| || || || || | | || | Sbjct 8086 AGATGTACAAGAAGGCCGAGGCTTCCTTCTGGACAGCGGAGGAGGTGGACCTTTCCAAGG 8027 Query 43797 ACTTA--GCACATTGGATTGCATTAAA-ACCACAAGAAAAACATTTTATATCTTTGGTTT 43853 || | |||| | ||| | | || || || ||| || || || || || Sbjct 8026 ACCTGCTGCAC-TGGGAGACCCTGAAGGACGACGAGAGGTAC--TTCATTTCGCACGTCC 7970 Query 43854 TGGCGTTTTTTGCTGCGAGCGACGGGATAGTCAATGAAAATTTGGTTAGTCGGTTTGCGC 43913 ||||||| ||||| || ||||| || || || |||||||| ||||| ||||| | Sbjct 7969 TGGCGTTCTTTGCAGCCAGCGATGGCATCGTGAATGAAAACTTGGTGGAGCGGTTCAGCC 7910 Query 43914 AAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATA 43973 | |||||||| | ||||||| || || || ||||| || || || ||||| ||||| | Sbjct 7909 AGGAAGTTCAGATCACAGAAGCCCGCTGCTTCTATGGCTTCCAGATCGCCATGGAAAACA 7850 Query 43974 TTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGATGGGCACGAGAAGC 44033 | ||||| || |||||||| || || || || || ||||||||||| | |||| | Sbjct 7849 TACATTCTGAGATGTACAGCCTCCTCATCGACACTTACATCAAAGACCCCAAAGAGAGGG 7790 Query 44034 ATCGATTGTTTAATGCGATAGAAACAGTACCTGCGATTAAACATAAAGCAGACTGGGCCC 44093 | | || ||||| || || | | ||| | || | || |||||||||||| Sbjct 7789 AGTTCCTCTTCAATGCCATCGAGAAGATGCCTTGTGTCAAGAAGAAGGCAGACTGGGCCT 7730 Query 44094 TTAAATGGAT---AAATTCAAATGATTCTTTTGGAGAACGACTTGTCGCGTTTGCAGTTG 44150 | ||||| | | | | | | |||||| || | || |||||||| | | Sbjct 7729 TGCGTTGGATTGGGGACAAAGAGGCCACCTATGGAGAGCGCGTGGTGGCGTTTGCTGAGG 7670 Query 44151 TGGAAGGCATTTTCTTTTCAGGATCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTT 44210 ||||||| || ||||| || || || || | | ||||| ||| | ||||| ||||| Sbjct 7669 TGGAAGGAATCTTCTTCTCTGGGTCTTTCACATCGATATTCTGGCTCAAGAAGCGAGGGC 7610 Query 44211 TGATGCCTGGGTTGACGTTTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCG 44270 ||||||| || | || || || | ||| | || || | ||||| ||||| || || | Sbjct 7609 TGATGCCCGGCCTCACATTCTCCAGCGAGCTTATTAGCAGAGATGAGGGCTTGCACTGTG 7550 Query 44271 ATTTTGCTTGCTTGTTACTTGGATATCTAGGAGACGATAAGCCTTCATGTAAGACAATTA 44330 | ||||| ||| || | | | | || | | || || ||||| ||| | | | Sbjct 7549 ACTTTGCCTGCCTGATGTTCAAACACCTGGCACAC---AAACCTTCGGAGCAGAAAGTAA 7493 Query 44331 CAGATATTGTTGTAGAGGCAGTAAAGATAGAACAAGAATTTATGACAACAGCATTACCTG 44390 || || | | | ||| | ||||||||||| || || | || || || || | Sbjct 7492 AGGAAATCATCATCAATGCATTTAAGATAGAACAGGAGTTCCTCACGGAGGCCTTGCCAG 7433 Query 44391 TAAATTTAATAGGAATGAA-TGAACTTTTGATGAACCAATATATTGAATACATTGCAGAT 44449 | || | || || ||||| || || ||||||||| || || ||||||| | || || Sbjct 7432 TGAAGCTCATTGGGATGAATTGTAC-TTTGATGAAACAGTACATTGAATTTGTGGCCGAC 7374 Query 44450 CGTTTACTTTTGGAACTGGGTTGCGATAAACACTAT-ATTGTACAAAACCCGTTTGATTT 44508 | | || |||| ||||||| | || || | || ||||||||||||| || Sbjct 7373 AGGCTCCTGCTGGAGCTGGGTT-TTAGCAAGGCTTTCCGAGTGGAAAACCCGTTTGACTT 7315 Query 44509 TATGGAAAATATTTCGTTGGAAGGCAAAACAAACTTTTTTGAAAAACGCGTTGGAGAATA 44568 ||||| || || || | ||||| || || ||||| ||||| || || || || | Sbjct 7314 CATGGAGAACATCTCACTAGAAGGGAAGACCAACTTCTTTGAGAAGAAAGTAGGCGAGAA 7255 Query 44569 TCAGCGAATGGGCGTCATG 44587 |||| | ||||| || ||| Sbjct 7254 TCAGAGGATGGGGGTGATG 7236 >seq32390 Length=18494 Score = 102 bits (112), Expect = 6e-17 Identities = 97/124 (78%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 44135 GTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCGGCCATATTTTGG 44194 || || ||||| | ||| ||||| |||||||| || ||||| ||||| || ||||| ||| Sbjct 1872 GTGGCCTTTGCTGCTGTAGAAGGAATTTTCTTCTCGGGATCTTTTGCTGCAATATTCTGG 1931 Query 44195 TTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTAATAAGTCGTGAT 44254 ||||||||| ||||| | |||||||| | || ||||| ||||| | || || | ||| Sbjct 1932 TTAAAGAAAAGAGGTCTTATGCCTGGACTCACCTTTTCCAATGAACTCATCAGCAGAGAT 1991 Query 44255 GAAG 44258 |||| Sbjct 1992 GAAG 1995 Score = 89.7 bits (98), Expect = 4e-13 Identities = 69/82 (84%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 44493 AAAACCCGTTTGATTTTATGGAAAATATTTCGTTGGAAGGCAAAACAAACTTTTTTGAAA 44552 |||| || ||||||||||||||||| ||||| || ||||| |||||||| || ||||| | Sbjct 8353 AAAATCCCTTTGATTTTATGGAAAACATTTCTTTAGAAGGGAAAACAAATTTCTTTGAGA 8412 Query 44553 AACGCGTTGGAGAATATCAGCG 44574 |||| ||| ||| |||||||| Sbjct 8413 AACGAGTTTCAGAGTATCAGCG 8434 >seq130622 Length=3288 Score = 93.3 bits (102), Expect = 3e-14 Identities = 272/413 (66%), Gaps = 27/413 (7%) Strand=Plus/Plus Query 19348 GGACTTTTGCTTTATGGGCCACCGGGTTGTGGAAAAACATTAATTGCGAGAGAACTTAGT 19407 ||||| | ||||||||||| || || ||| |||||| | ||||| || || | | Sbjct 2215 GGACTACTACTTTATGGGCCCCCAGGAACTGGTAAAACACTGATTGCCCGACAATTAGGC 2274 Query 19408 AAATTACTTACAAAAC----AACCTCCCAAAATTGTAAATGGTCCTGAAATCTTAAATAA 19463 ||| ||| | |||| | || || || ||||| ||||| || ||| | | ||||| Sbjct 2275 AAA--ACT--CTAAACGCCCATCCACCTAAGATTGTCAATGGCCCCGAAGTGCTGAATAA 2330 Query 19464 ATATGTAGGTCAATCGGAAGAAAATGTACGACGTTTGTTTGCTGACGCTGAAGAAGA--A 19521 | ||| |||||||| || || || | || |||| || || || || |||| | Sbjct 2331 GTTTGTTGGTCAATCCGAGGAGAACATCAGAAAGCTGTTCGCAGATGCAGAGAAAGAGTA 2390 Query 19522 CAA--AAACGTTTAGGGCG-CAAAAGTTCTTTGCACATTATAATACTAGATGAATTGGAC 19578 ||| ||| |||| | | | ||| | | ||||| || || | ||||| | || Sbjct 2391 CAAGGAAA-----AGGGAGACGAGAGTGGTCTTCACATCATCATCTTTGATGAGCTTGAT 2445 Query 19579 GCAATCTGTAAGCAAAGAGGTTCTGGTGTAAATGGAGT-ACA--------TGACACTGTT 19629 || | |||||||| |||||||||| ||| | ||| ||| |||||| Sbjct 2446 GCTGTTTGTAAGCAGCGAGGTTCTGGATCTGGTGGCGGCACAGGTGTTGGTGATACTGTT 2505 Query 19630 GTCAATCAACTCCTGTCAAAATTAGACGGTGTTAACCAACTGAATAATATTTTAGTTATT 19689 ||||| || ||||| | ||| | || ||||| || |||| || ||||| | | || Sbjct 2506 GTCAACCAGCTCCTTGCCAAACTCGATGGTGTGGACAAACTTAACAATATCCTTTTGATC 2565 Query 19690 GGCATGACTAATAGACTGGAATTAATAGACAGCGCCTTATTACGACCCGGTCG 19742 |||||||| ||| || ||| | || ||| || || |||||||||| || Sbjct 2566 GGCATGACCAATCGAAAGGATATGATCGACGAGGCTTTGCTACGACCCGGACG 2618 >seq176809 Length=13038 Score = 91.5 bits (100), Expect = 1e-13 Identities = 76/93 (82%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 43928 CCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATG 43987 |||||||| || ||||||||||| ||||||||| ||| || ||| |||| || || ||| Sbjct 3442 CCAGAAGCTCGCTGTTTTTATGGCTTTCAAATTCTCATCGAGAATGTTCACTCAGAGATG 3383 Query 43988 TACAGTCTTCTGATAGATACGTACATCAAAGAT 44020 |||||| | || ||||| || ||||||| |||| Sbjct 3382 TACAGTTTGCTAATAGACACTTACATCAGAGAT 3350 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396596670443005