Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13]
177,401 sequences; 1,960,317,893 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq6383 212 5e-50
seq32390 102 6e-17
seq130622 93.3 3e-14
seq176809 91.5 1e-13
>seq6383
Length=23588
Score = 212 bits (234), Expect = 5e-50
Identities = 605/919 (66%), Gaps = 16/919 (2%)
Strand=Plus/Minus
Query 43677 TGCTTACAGAAAATCCGTCTAGGTTTGTCGTGTTTCCAATTCAATATCATGACATATGGC 43736
|||| | ||| || || | | |||||| | || || || | || || ||||| ||||
Sbjct 8146 TGCTGAGAGAGAACCCCTGCCGCTTTGTCATCTTCCCCATCGAGTACCACGACATCTGGC 8087
Query 43737 AAATGTACAAAAAAGCACAGGCGTCATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAG 43796
| |||||||| || || |||| || || |||||||| || || || || | | || |
Sbjct 8086 AGATGTACAAGAAGGCCGAGGCTTCCTTCTGGACAGCGGAGGAGGTGGACCTTTCCAAGG 8027
Query 43797 ACTTA--GCACATTGGATTGCATTAAA-ACCACAAGAAAAACATTTTATATCTTTGGTTT 43853
|| | |||| | ||| | | || || || ||| || || || || ||
Sbjct 8026 ACCTGCTGCAC-TGGGAGACCCTGAAGGACGACGAGAGGTAC--TTCATTTCGCACGTCC 7970
Query 43854 TGGCGTTTTTTGCTGCGAGCGACGGGATAGTCAATGAAAATTTGGTTAGTCGGTTTGCGC 43913
||||||| ||||| || ||||| || || || |||||||| ||||| ||||| |
Sbjct 7969 TGGCGTTCTTTGCAGCCAGCGATGGCATCGTGAATGAAAACTTGGTGGAGCGGTTCAGCC 7910
Query 43914 AAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATA 43973
| |||||||| | ||||||| || || || ||||| || || || ||||| ||||| |
Sbjct 7909 AGGAAGTTCAGATCACAGAAGCCCGCTGCTTCTATGGCTTCCAGATCGCCATGGAAAACA 7850
Query 43974 TTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGATGGGCACGAGAAGC 44033
| ||||| || |||||||| || || || || || ||||||||||| | |||| |
Sbjct 7849 TACATTCTGAGATGTACAGCCTCCTCATCGACACTTACATCAAAGACCCCAAAGAGAGGG 7790
Query 44034 ATCGATTGTTTAATGCGATAGAAACAGTACCTGCGATTAAACATAAAGCAGACTGGGCCC 44093
| | || ||||| || || | | ||| | || | || ||||||||||||
Sbjct 7789 AGTTCCTCTTCAATGCCATCGAGAAGATGCCTTGTGTCAAGAAGAAGGCAGACTGGGCCT 7730
Query 44094 TTAAATGGAT---AAATTCAAATGATTCTTTTGGAGAACGACTTGTCGCGTTTGCAGTTG 44150
| ||||| | | | | | | |||||| || | || |||||||| | |
Sbjct 7729 TGCGTTGGATTGGGGACAAAGAGGCCACCTATGGAGAGCGCGTGGTGGCGTTTGCTGAGG 7670
Query 44151 TGGAAGGCATTTTCTTTTCAGGATCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTT 44210
||||||| || ||||| || || || || | | ||||| ||| | ||||| |||||
Sbjct 7669 TGGAAGGAATCTTCTTCTCTGGGTCTTTCACATCGATATTCTGGCTCAAGAAGCGAGGGC 7610
Query 44211 TGATGCCTGGGTTGACGTTTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCG 44270
||||||| || | || || || | ||| | || || | ||||| ||||| || || |
Sbjct 7609 TGATGCCCGGCCTCACATTCTCCAGCGAGCTTATTAGCAGAGATGAGGGCTTGCACTGTG 7550
Query 44271 ATTTTGCTTGCTTGTTACTTGGATATCTAGGAGACGATAAGCCTTCATGTAAGACAATTA 44330
| ||||| ||| || | | | | || | | || || ||||| ||| | | |
Sbjct 7549 ACTTTGCCTGCCTGATGTTCAAACACCTGGCACAC---AAACCTTCGGAGCAGAAAGTAA 7493
Query 44331 CAGATATTGTTGTAGAGGCAGTAAAGATAGAACAAGAATTTATGACAACAGCATTACCTG 44390
|| || | | | ||| | ||||||||||| || || | || || || || |
Sbjct 7492 AGGAAATCATCATCAATGCATTTAAGATAGAACAGGAGTTCCTCACGGAGGCCTTGCCAG 7433
Query 44391 TAAATTTAATAGGAATGAA-TGAACTTTTGATGAACCAATATATTGAATACATTGCAGAT 44449
| || | || || ||||| || || ||||||||| || || ||||||| | || ||
Sbjct 7432 TGAAGCTCATTGGGATGAATTGTAC-TTTGATGAAACAGTACATTGAATTTGTGGCCGAC 7374
Query 44450 CGTTTACTTTTGGAACTGGGTTGCGATAAACACTAT-ATTGTACAAAACCCGTTTGATTT 44508
| | || |||| ||||||| | || || | || ||||||||||||| ||
Sbjct 7373 AGGCTCCTGCTGGAGCTGGGTT-TTAGCAAGGCTTTCCGAGTGGAAAACCCGTTTGACTT 7315
Query 44509 TATGGAAAATATTTCGTTGGAAGGCAAAACAAACTTTTTTGAAAAACGCGTTGGAGAATA 44568
||||| || || || | ||||| || || ||||| ||||| || || || || |
Sbjct 7314 CATGGAGAACATCTCACTAGAAGGGAAGACCAACTTCTTTGAGAAGAAAGTAGGCGAGAA 7255
Query 44569 TCAGCGAATGGGCGTCATG 44587
|||| | ||||| || |||
Sbjct 7254 TCAGAGGATGGGGGTGATG 7236
>seq32390
Length=18494
Score = 102 bits (112), Expect = 6e-17
Identities = 97/124 (78%), Gaps = 0/124 (0%)
Strand=Plus/Plus
Query 44135 GTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCGGCCATATTTTGG 44194
|| || ||||| | ||| ||||| |||||||| || ||||| ||||| || ||||| |||
Sbjct 1872 GTGGCCTTTGCTGCTGTAGAAGGAATTTTCTTCTCGGGATCTTTTGCTGCAATATTCTGG 1931
Query 44195 TTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTAATAAGTCGTGAT 44254
||||||||| ||||| | |||||||| | || ||||| ||||| | || || | |||
Sbjct 1932 TTAAAGAAAAGAGGTCTTATGCCTGGACTCACCTTTTCCAATGAACTCATCAGCAGAGAT 1991
Query 44255 GAAG 44258
||||
Sbjct 1992 GAAG 1995
Score = 89.7 bits (98), Expect = 4e-13
Identities = 69/82 (84%), Gaps = 0/82 (0%)
Strand=Plus/Plus
Query 44493 AAAACCCGTTTGATTTTATGGAAAATATTTCGTTGGAAGGCAAAACAAACTTTTTTGAAA 44552
|||| || ||||||||||||||||| ||||| || ||||| |||||||| || ||||| |
Sbjct 8353 AAAATCCCTTTGATTTTATGGAAAACATTTCTTTAGAAGGGAAAACAAATTTCTTTGAGA 8412
Query 44553 AACGCGTTGGAGAATATCAGCG 44574
|||| ||| ||| ||||||||
Sbjct 8413 AACGAGTTTCAGAGTATCAGCG 8434
>seq130622
Length=3288
Score = 93.3 bits (102), Expect = 3e-14
Identities = 272/413 (66%), Gaps = 27/413 (7%)
Strand=Plus/Plus
Query 19348 GGACTTTTGCTTTATGGGCCACCGGGTTGTGGAAAAACATTAATTGCGAGAGAACTTAGT 19407
||||| | ||||||||||| || || ||| |||||| | ||||| || || | |
Sbjct 2215 GGACTACTACTTTATGGGCCCCCAGGAACTGGTAAAACACTGATTGCCCGACAATTAGGC 2274
Query 19408 AAATTACTTACAAAAC----AACCTCCCAAAATTGTAAATGGTCCTGAAATCTTAAATAA 19463
||| ||| | |||| | || || || ||||| ||||| || ||| | | |||||
Sbjct 2275 AAA--ACT--CTAAACGCCCATCCACCTAAGATTGTCAATGGCCCCGAAGTGCTGAATAA 2330
Query 19464 ATATGTAGGTCAATCGGAAGAAAATGTACGACGTTTGTTTGCTGACGCTGAAGAAGA--A 19521
| ||| |||||||| || || || | || |||| || || || || |||| |
Sbjct 2331 GTTTGTTGGTCAATCCGAGGAGAACATCAGAAAGCTGTTCGCAGATGCAGAGAAAGAGTA 2390
Query 19522 CAA--AAACGTTTAGGGCG-CAAAAGTTCTTTGCACATTATAATACTAGATGAATTGGAC 19578
||| ||| |||| | | | ||| | | ||||| || || | ||||| | ||
Sbjct 2391 CAAGGAAA-----AGGGAGACGAGAGTGGTCTTCACATCATCATCTTTGATGAGCTTGAT 2445
Query 19579 GCAATCTGTAAGCAAAGAGGTTCTGGTGTAAATGGAGT-ACA--------TGACACTGTT 19629
|| | |||||||| |||||||||| ||| | ||| ||| ||||||
Sbjct 2446 GCTGTTTGTAAGCAGCGAGGTTCTGGATCTGGTGGCGGCACAGGTGTTGGTGATACTGTT 2505
Query 19630 GTCAATCAACTCCTGTCAAAATTAGACGGTGTTAACCAACTGAATAATATTTTAGTTATT 19689
||||| || ||||| | ||| | || ||||| || |||| || ||||| | | ||
Sbjct 2506 GTCAACCAGCTCCTTGCCAAACTCGATGGTGTGGACAAACTTAACAATATCCTTTTGATC 2565
Query 19690 GGCATGACTAATAGACTGGAATTAATAGACAGCGCCTTATTACGACCCGGTCG 19742
|||||||| ||| || ||| | || ||| || || |||||||||| ||
Sbjct 2566 GGCATGACCAATCGAAAGGATATGATCGACGAGGCTTTGCTACGACCCGGACG 2618
>seq176809
Length=13038
Score = 91.5 bits (100), Expect = 1e-13
Identities = 76/93 (82%), Gaps = 0/93 (0%)
Strand=Plus/Minus
Query 43928 CCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATG 43987
|||||||| || ||||||||||| ||||||||| ||| || ||| |||| || || |||
Sbjct 3442 CCAGAAGCTCGCTGTTTTTATGGCTTTCAAATTCTCATCGAGAATGTTCACTCAGAGATG 3383
Query 43988 TACAGTCTTCTGATAGATACGTACATCAAAGAT 44020
|||||| | || ||||| || ||||||| ||||
Sbjct 3382 TACAGTTTGCTAATAGACACTTACATCAGAGAT 3350
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 396596670443005
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |