Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_028099.1 Length=122522 Score E Sequences producing significant alignments: (Bits) Value seq18562 111 1e-19 seq145711 84.2 2e-11 >seq18562 Length=18598 Score = 111 bits (122), Expect = 1e-19 Identities = 478/741 (65%), Gaps = 40/741 (5%) Strand=Plus/Minus Query 111574 TCCATCTTTATAGCAGGATGAGGTCTATAATTCTCCAAT-TCAAAGTCATCAGCAACAAA 111632 ||||| || |||| || || || | || | || |||| | |||||| ||||| || Sbjct 12977 TCCATTTTAATAGTCGGGTGGGGATTGTA-TCCTTCAATCTGAAAGTCTTCAGCCCTGAA 12919 Query 111633 ATCGTCAATGCAAGCAACTCTTCGTTTAATTTTTAGTTTTGGAAAGGGGGTAGGCTTTCG 111692 || ||||| ||||| |||| ||||| || || | || || | || | || Sbjct 12918 GTCATCAATTGCCTCAACTTTTCGAAGGATTTTGAGCTTCAGGAAAGGTCTTGGTTCTCA 12859 Query 111693 GGTAAGCTGTAATTGTAAAGGCTGTATGTGATTTAAATAAACATGCGCATCTCCTATACA 111752 |||||| | || | |||| | ||||| | ||||| || |||||||| | | Sbjct 12858 CTGAAGCTGCAGTTTCAGCGGCTCAGTATGATTCAGGTAAACGTGTGCATCTCCCAAAGT 12799 Query 111753 ATGGATCAATTCCCAAGGCTCCAAACCAGTGATGTGTGCAATCATGTATGTGAGTAGACT 111812 || | || || | |||| | || |||||||||| ||||||| ||||| || Sbjct 12798 GTGTACAAAGTCACCTGGCTTTAGGCCCATGATGTGTGCGATCATGTGGGTGAGCAGGGA 12739 Query 111813 GTAACTAGCAATGTTAAATGGCACACCTAGGCCCATATCTCCCGATCTTTGATATAGCTG 111872 ||| || | ||||| || || | || |||||||| ||| | || || || |||||||| Sbjct 12738 GTAGCTGGAGATGTTGAAGGGTGCGCCCAGGCCCATGTCTGCTGACCTCTGGTATAGCTG 12679 Query 111873 ACATGATAG-------TTTATTTTGT-GACACATAAAATTGACAAAGTACATGACAAGGA 111924 || || || || || || ||||| || || || ||||| |||| || ||| Sbjct 12678 GCAGGACAGCTCCCCATTCATCACGTAGACACGTAGAACTGGCAAAGGGCATGGCATGGA 12619 Query 111925 GGCAATGCCATCCCATTCATAAAG---GGTCCCCATGCACACATGATCATCCTTCTG-CT 111980 || | ||||| | | | || ||| ||||||| || || |||||| | Sbjct 12618 GGTAGGGCCATGAAAGGAAGATCTTTTGGATTCCAAGCACACAGAATGATTCTTCTGTCA 12559 Query 111981 GTAGC---GATTATGTTCAATGTCGTGTATGACATTCAAGAGCTGGTCTATCCCTTTACC 112037 |||| | || || ||| |||| || || || || ||| | | |||| ||| Sbjct 12558 GTAGGTTTGGTTTTGATCA-TGTCA---ATCACCTTTTGCAGTTGGCCCACTCCTTGACC 12503 Query 112038 AGTATAATCCGCCTGACATCCAG-----TGTATGTTGCCCCATAGTGTCTCCATTGGAAT 112092 | |||||| ||| ||||| ||||| ||||||| | || ||||| || || Sbjct 12502 TGAATAATC----TGA-ATCCATATTTTTGTATTCTGCCCCAAAATGCCTCCACTGAAAG 12448 Query 112093 CCATAAATAGGCCCCAGATCTCCCGGGGCTGTATCTG---GAAATTGCTCT-CTATTCAA 112148 || |||| || || | ||| ||| || | |||| || | | | | || || Sbjct 12447 CC-TAAACTGGGCCTAAATCCCCCT---CTTT-TCTGCTAGAGAATCCAAGGCCATCCAG 12393 Query 112149 CAAATCACTTCTAATATGAGGATTCCAAATCTTCACTCCTTTAGATGATAACTCTCTTGC 112208 || |||| || | || ||| || |||||||| | | ||| | ||| | || Sbjct 12392 GAAGTCACGAGACCCATTGGCATCCCAGATTTTCACTCCCCTGGTTGACAGTTCTTTAGC 12333 Query 112209 ATTTGTGGATCCTCTAATAAACCATAGCAATTCTTCCACAACCCCTTTCCAGTACACTCT 112268 |||||||||||| | |||||||| |||| || |||| || ||| |||||| |||| | Sbjct 12332 ATTTGTGGATCCGTTGATAAACCACAGCAGCTCCTCCAAAATCCCCTTCCAGAACACACA 12273 Query 112269 TTTAGTAGTTAGCAGTGGAAA 112289 ||| || || ||||| ||||| Sbjct 12272 TTTGGTTGTCAGCAGAGGAAA 12252 >seq145711 Length=17273 Score = 84.2 bits (92), Expect = 2e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 111778 CCAGTGATGTGTGCAATCATGTATGTGAGTAGACTGTAACTAGCAATGTTAAATGGCACA 111837 || ||||||||||| |||||||| ||||| || ||| || || ||||| || ||||| Sbjct 11198 CCCGTGATGTGTGCGATCATGTAGGTGAGCAGGGAGTAGCTGGCGATGTTGAAGGGCACG 11257 Query 111838 CCTAGGCCCATATCTCCCGATCTTTGATATAGCTGACATGATAG 111881 || |||||||| ||| | || || || |||||||| || || || Sbjct 11258 CCCAGGCCCATGTCTGCTGACCTCTGGTATAGCTGGCAGGACAG 11301 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 391098184339363