Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13]
177,401 sequences; 1,960,317,893 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq172910 223 4e-53
seq177327 132 5e-26
seq102337 100 3e-16
seq93694 91.5 2e-13
seq32390 84.2 2e-11
>seq172910
Length=5564
Score = 223 bits (246), Expect = 4e-53
Identities = 520/775 (67%), Gaps = 22/775 (3%)
Strand=Plus/Minus
Query 53180 CCTCAGTATCTTTTCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTC 53239
|||||| | | ||||||| || | | ||||| ||||| || | ||| |||
Sbjct 3794 CCTCAGCACATGATCATGCGTGTGTCTGTTGGTATTTGGGGTGATGATATCGAGCGAGTC 3735
Query 53240 CGTGAGACGTACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTC 53299
||||| ||| || | ||| | || | ||| || || || | || || || |||
Sbjct 3734 TTGGAGACATACAACCTGATGTCCAGCAAATTCTTCACACATGCTTCTCCCACGCTCTTC 3675
Query 53300 AACGCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGAC 53359
||||| || || ||| || || |||| |||||| |||| | |||||||| |||
Sbjct 3674 AACGCCGGCACCCCTCAGCCCCAATTGTCATCTTGCTTCTTGGTTGATATGAAGGACGAC 3615
Query 53360 TCGATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGT 53419
|| || || |||||||| || |||||| |||||| ||||||||| | | |||
Sbjct 3614 AGTATTGAGGGAATCTACGATACTCTCAAGACCTGTGCCATGATCTCCAAGATGGCTGGT 3555
Query 53420 GGTATCGGTATCCAC-TGCTC-GAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGA 53477
||||| ||| | || ||| | | | ||||||| | ||| | ||| || || |
Sbjct 3554 GGTATTGGTCTGAACGTGCACCGTA--TCCGTGCTACTGGCTCCTACATCGCCGGTACCA 3497
Query 53478 ACGG--CGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTA 53535
|||| | ||| | || | || |||||||| || |||||||||||||| || || ||
Sbjct 3496 ACGGTACATCGA--ACGGTGTTGTTCCTATGCTTCGTGTCTTCAACAACACTGCTCGCTA 3439
Query 53536 CGTCAACCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCA 53595
||| |||||||||| ||||| || | || ||||||||||||||||| |||||
Sbjct 3438 TGTCGACCAGGGTGGCAACAAGCGACCCGGTGCTTTTGCCATCTACCTCGAGCCTTGGCA 3379
Query 53596 CGCCGACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTG 53655
| | || | | ||||| || || || ||| ||| || ||| | || ||| | ||
Sbjct 3378 CTCTGATGTCTTCGAGTTCCTTGATCTCCGTAAGAACCACGGTAAAGAGGAGGTCCGTGC 3319
Query 53656 CCGTGACCTGTTTACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGA 53715
||||||||| || || || ||||| || || || |||||| | || || ||| |
Sbjct 3318 CCGTGACCTTTTCCTCGCCCTTTGGATCCCTGATCTTTTCATGAAGCGTGTTGAAAAGAA 3259
Query 53716 CGAGGAGTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCTC-CAGGGTGTCTACGGTG 53774
|| || ||| ||||||||||| ||||||||||| |||||| | | || |||||| |
Sbjct 3258 CGGCGACTGGACGCTGATGTGCCCCAACGAGTGCCCTGGCCTCGCCGACTG-CTACGGAG 3200
Query 53775 AGGAGTTTAACGAGATGTATCGGACGTAC-----GCAGTTC-AGGGCCGCTACAAGAAGA 53828
||||||| | | |||| | |||| | || | |||| ||| ||||
Sbjct 3199 AGGAGTTCGAGGCTCTGTACGAAAAGTACGAGAAGGAGGGCAAGGGTCGC------AAGA 3146
Query 53829 AGGTCAAGGCGCGTGAGGTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGC 53888
||||||| | | | ||| | || || || || |||| ||||| |||| |
Sbjct 3145 CTATCAAGGCTCAGAAACTTTGGTACGCCATTCTTGAGGCCCAGACTGAGACCGGAAACC 3086
Query 53889 CGTACATGTGCTACAAGGATTCGGTCAACGAGAAGAGCAACCAGAAGAACATCGG 53943
| | |||| |||||||||| | |||| ||||||||||| |||||| ||||
Sbjct 3085 CATTCATGCTCTACAAGGATGCCTGCAACCGCAAGAGCAACCAAAAGAACCTCGG 3031
Score = 89.7 bits (98), Expect = 6e-13
Identities = 530/830 (64%), Gaps = 54/830 (7%)
Strand=Plus/Minus
Query 55127 GTTGTGACTCGGAACCTGAACCGGGTCATCGACAAGAATTACTACCCGACTGAAGCGGCG 55186
||||| | ||| ||||||||| | ||||||| ||| ||||||| | | |||
Sbjct 2876 GTTGTTATTCGCAACCTGAACAAGATCATCGATGTGAACCACTACCCTGTCCAGGAGGCT 2817
Query 55187 CGCAAGTCCAACCTCCGGCACCGGCCCATCGCCATCGGTGTACAGGGCTTGGCCGACATC 55246
||||| ||| | || ||||| ||||| | | ||||| |||||| | |||||
Sbjct 2816 CGCAACAGTAACATGCGCCACCGACCCATTGGTCTTGGTGTTCAGGGCCTTGCCGATGCT 2757
Query 55247 TTCATGATGCTCGGAT--TGCCCTTCGACTCGGAACCT--GCTCGAGAAATTAACCAGGA 55302
||| | ||||| | |||||||||| || | || ||||| || | ||| || |
Sbjct 2756 TTCCT--TGCTCTGCGCATGCCCTTCGAGTC--ACCCGAGGCTCGTGAGCTCAACAAGCA 2701
Query 55303 CATCTTC-AGTCGCATCTACTTTGCAGCGCTCGAGGAGTC-GTGTCATCTGGCTATGAGC 55360
|||||| || | ||| ||| || || ||| | || ||| || ||||||| |
Sbjct 2700 GATCTTCGAGAC-CATTTACCACGCTGCCCTCACTGCCTCCGTG-CAGCTGGCTAAGGAG 2643
Query 55361 GAGGGGACCTACGAGACGTTCCGTGATTCGCCAGCTGACAAGGGACTTCTCCAGTTCGAT 55420
||||| ||||| || ||| | ||| || || |||| | |||||||||||
Sbjct 2642 GAGGGTCCCTACTCCACCTTCAAAGGTTCCCCCGCCTCTGAGGGTATCCTCCAGTTCGAC 2583
Query 55421 CTATGG---GGCAAG---TCTGACCCCATG---TTTGACA-------AGTTGAAG-CATG 55463
| ||| | |||| ||||||| | | | || | || |||| || |
Sbjct 2582 ATGTGGAACGTCAAGCCCTCTGACCTCTGGGACTGGGAGACTCTTCGAGAGGAAGTCAAG 2523
Query 55464 ACATTCACTTGTGGGGCCTACGCAACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGA 55523
||| ||| ||| | || ||| |||||| | || || ||||| || || |
Sbjct 2522 ACA--CAC------GGCATCCGTAACAGTCTGCTCCTTGCTCCTATGCCTACTGCCAGTA 2471
Query 55524 CGGCTCAGATCATGGGCAACAACGAGGCGTTCGAGCCGTACACGACCAACATCTACCTGC 55583
| | ||||| |||||||||||||| |||||||| ||||| |||||||||||| |
Sbjct 2470 CCTCCCAGATTCTGGGCAACAACGAGTGCTTCGAGCCCTACACCTCCAACATCTACCAAC 2411
Query 55584 GCCGGACCCTAGCAGGTGAGTTTGTCATGATCAACAAGCACCTCGTCAAGGACCTGCAGA 55643
| || || || |||||||| | ||||| || ||||||||||
Sbjct 2410 GACGTGTTCTCGCTGGTGAGTTCCAGGTTGTCAACCCCTGGCTGCTCAAGGACCTTGTCG 2351
Query 55644 AGATCAACAAGTGGAACCCGCAG--ATCAAGA--CGGAT-ATTGTGCGGAACGGGGGGTC 55698
| || |||| ||| | || |||| || || |||| ||| || ||
Sbjct 2350 ACATGGGTCTGTGGT--CCGATGCTATGAAGAACCGCATCATTGCTGAGAATGGT---TC 2296
Query 55699 CGTCCAGAA---TCTGGAGATTCCTCTGCGTCTCAAGGAGATTTACCGGACGGTGTGGGA 55755
| | ||||| || | || ||| | |||||| | || ||| || |||||
Sbjct 2295 CATTCAGAACATTCCCAACATCCCTGCCGATGTCAAGGCTCTGTATAAGACCGTTTGGGA 2236
Query 55756 GATTCCACAGAAG--AGTCTGATTGACATGAGTGCTGATCGTGGTGCGTACATCGACCAG 55813
||| | ||| |||| || | ||| ||||||||| ||||| | ||| || |||
Sbjct 2235 GATCTCTCAGCGCCAAGTCG--TTCAGATGGCTGCTGATCGAGGTGCCTTCATTGATCAG 2178
Query 55814 TCCCAGTCTCTGAACATCTTCATGGAGAATCCTTCACTGGCCAAGTTGAGCTCGATGCAC 55873
|||||||| ||||||||| |||| | | || | ||| |||| | | | ||||||
Sbjct 2177 TCCCAGTCACTGAACATCCACATGAAAGACCCCACGATGGGCAAGATCACCAGTATGCAC 2118
Query 55874 TTTTACGGGTGGAAGAAGGGACTCAAGACGGGTATGTACTATCTGCGGAC 55923
||| || |||||| || |||||||| || |||||||| || || ||
Sbjct 2117 TTTGCAGGCTGGAAGCTTGGCCTCAAGACTGGCATGTACTACCTTCGTAC 2068
>seq177327
Length=22076
Score = 132 bits (146), Expect = 5e-26
Identities = 243/351 (69%), Gaps = 15/351 (4%)
Strand=Plus/Plus
Query 124553 CTGCAACATAAGCCACATGGCTTGGACGTAGTCCTCTGCGTGCCCCCAGTCGCGCTTGGC 124612
||||| ||| |||||||| ||| ||||| |||| ||| |||||||| ||||||||
Sbjct 14029 CTGCAGCATGCGCCACATGCCTTCCACGTATTCCTTGGCGAAGCCCCAGTCACGCTTGGC 14088
Query 124613 ATCCAGGTTTCCGAGCTCGATTG------GCTTGGCCGTCTTGTTCCACTCCGCCAAACC 124666
|||||||| || || || | ||| | || |||| || | || ||||
Sbjct 14089 GTCCAGGTTGCCCAGTTCCAGGACGTCCAGCTGGCCCAGCTTGATC---TTGGC--AACC 14143
Query 124667 CAGT--GTAATCTTGCGCGTCACAAACTCGGAACCGCGTCGCTCAGACTCGTGGTTGAAC 124724
||| || |||||||| ||||| |||||| ||||| || ||||||||||||
Sbjct 14144 GAGTCGGTGATCTTGCGGGTCACGAACTCGCGCCCGCGCAGCGGGCTTTCGTGGTTGAAC 14203
Query 124725 AGAATGCCAGTACACGCAAACATCCCGTACGACTCGCGGTAGTTTTTCGTCATCCAATAC 124784
|| ||||| | | | || || |||| |||||||||||| || ||||| | |
Sbjct 14204 AGGATGCCGCTGGAACCGAAGATGTCGTAGCTCTCGCGGTAGTTGACGGTGATCCAGTGC 14263
Query 124785 CCAAAGAGCTTGGACACGCCATAGGGGCTTCGGGGGTAGAATGGGGTGT-TTTCATTTTG 124843
| ||||||||| |||||| || ||||| || |||||||| ||||||| | || |
Sbjct 14264 GCGTAGAGCTTGGCCACGCCGTACGGGCTGCGCGGGTAGAACGGGGTGTCCTCCACCTGC 14323
Query 124844 GGTAGGTTGCTGAATCTTCCCAAACATCTCCGAAGTACCCGCCTGATAGAA 124894
|| | | ||| | ||| || ||||| ||||| || |||||| |||||
Sbjct 14324 GGCACG-GCCTGCACCTTGCCGAACATTTCCGAGGTCGACGCCTGGTAGAA 14373
>seq102337
Length=60337
Score = 100 bits (110), Expect = 3e-16
Identities = 97/125 (78%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 117305 GTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAGACGCGTACCGAATTGT 117364
|||||||||||||||| |||||||||||| ||||||||| ||| || || || || ||
Sbjct 22095 GTGAAAATGTAACGAGGGCTTGCAGCATCTTTGCCACCATGAAGCCGAGTTCCAAACTGA 22154
Query 117365 CCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGACA 117424
||| | || | | | ||| | |||||| ||||||||||| |||||||| || |||
Sbjct 22155 CCAATAGGTTGAAGCAAGTTAATGTTGTTACTTCCCACAAAGTTCTGAGCCAAATTCACA 22214
Query 117425 ATCGT 117429
|| ||
Sbjct 22215 ATAGT 22219
Score = 91.5 bits (100), Expect = 2e-13
Identities = 95/125 (76%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 152029 GTGAAGATGTATCGGGAGCTGGCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGT 152088
||||| ||||| || | ||| || ||||| |||||||| ||||| |||||||||||
Sbjct 22095 GTGAAAATGTAACGAGGGCTTGCAGCATCTTTGCCACCATGAAGCCGAGTTCCAAACTGA 22154
Query 152089 CCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTCACA 152148
||| || | || | ||| | |||||| ||||| || ||||||||||||||||||
Sbjct 22155 CCAATAGGTTGAAGCAAGTTAATGTTGTTACTTCCCACAAAGTTCTGAGCCAAATTCACA 22214
Query 152149 ATCGT 152153
|| ||
Sbjct 22215 ATAGT 22219
>seq93694
Length=24826
Score = 91.5 bits (100), Expect = 2e-13
Identities = 95/125 (76%), Gaps = 0/125 (0%)
Strand=Plus/Minus
Query 152029 GTGAAGATGTATCGGGAGCTGGCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGT 152088
||||||||||||| | || || | |||||||||||| ||||| || ||||||||
Sbjct 3889 GTGAAGATGTATCTAGGACTAGCAGAATCCTTGCCACCATGCAGCCTGGTACCAAACTGA 3830
Query 152089 CCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTCACA 152148
||| ||||| | ||||| || || ||| ||||| ||||||||||||||||| | |
Sbjct 3829 CCAATGGGCTGCAACAGGTTCAGATTATTGCTCCCCACAAAATTCTGAGCCAAATTGATA 3770
Query 152149 ATCGT 152153
|| ||
Sbjct 3769 ATGGT 3765
Score = 91.5 bits (100), Expect = 2e-13
Identities = 95/125 (76%), Gaps = 0/125 (0%)
Strand=Plus/Minus
Query 117305 GTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAGACGCGTACCGAATTGT 117364
||||| ||||| | || || |||| ||||||||||||| || | ||||| || ||
Sbjct 3889 GTGAAGATGTATCTAGGACTAGCAGAATCCTTGCCACCATGCAGCCTGGTACCAAACTGA 3830
Query 117365 CCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGACA 117424
||| | |||| ||| |||||||| || ||| |||||||| || |||||||| |||| |
Sbjct 3829 CCAATGGGCTGCAACAGGTTCAGATTATTGCTCCCCACAAAATTCTGAGCCAAATTGATA 3770
Query 117425 ATCGT 117429
|| ||
Sbjct 3769 ATGGT 3765
>seq32390
Length=18494
Score = 84.2 bits (92), Expect = 2e-11
Identities = 93/124 (75%), Gaps = 0/124 (0%)
Strand=Plus/Minus
Query 74770 CTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTTCT 74829
||||||||||||| || | |||||| ||||| | || ||||||||||| || | ||||
Sbjct 1995 CTTCATCTCTGCTGATGAGTTCATTGGAAAAGGTGAGTCCAGGCATAAGACCTCTTTTCT 1936
Query 74830 TCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAAGG 74889
| ||||| || || ||| || || || |||||| || ||||| ||| |||||||
Sbjct 1935 TTAACCAGAATATTGCAGCAAAAGATCCCGAGAAGAAAATTCCTTCTACAGCAGCAAAGG 1876
Query 74890 CGAC 74893
| ||
Sbjct 1875 CCAC 1872
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 546002541679800
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