Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_028238.1 Length=188534 Score E Sequences producing significant alignments: (Bits) Value seq144260 84.2 3e-11 >seq144260 Length=9703 Score = 84.2 bits (92), Expect = 3e-11 Identities = 199/297 (67%), Gaps = 4/297 (1%) Strand=Plus/Minus Query 32810 TAAATGGTTTGCAGGAGGACAGGCATTTTTTGGAGCACAGATAAATTCTTTTATACATGT 32869 ||||||| | || ||||| |||||||||||||| || | |||||||| || ||||| Sbjct 7410 TAAATGGCTCACATAGGGACAAGCATTTTTTGGAGCCCACCTGAATTCTTTCATCCATGT 7351 Query 32870 TATAATGTATAGTTATTACGGATTAACAGCAATAGGTCCTTCCTTGCGAAAATATCTATG 32929 || | ||| || ||| | ||||| ||| | || || | | | || | ||| || Sbjct 7350 GATTAGGTACTCATACTACAGGTTAACTGCATTTGGCCCATGGATTCAGAATTGTCTTTG 7291 Query 32930 GTGGAAAAAATATTTAACTATCATACAATTGATGCAGT--TTCATTTAGCAATAGGTCAT 32987 |||||| |||| | | || | || || | | || |||| | | || |||| ||| Sbjct 7290 ATGGAAATAATACCTGAGCATATTGCAGCTGGTTCGGTTCTTCA-TGACCATTAGG-CAT 7233 Query 32988 ACAGCAATGTCTATATATATAGATTGTCCGTTCCCTAGATGGATACAGTGGGCTGTTATT 33047 || ||| || || | || | ||||||| ||| | |||||| || |||||| | ||| Sbjct 7232 ACGGCACTGCCTCTTTACACTGATTGTCTCTTCTAAAAATGGATGCACTGGGCTCTAATT 7173 Query 33048 ATATATTCTATCACCTTTATCATCCTTTTTGGCAACTTTTATCTCAGGACATATAAT 33104 || | |||| ||| || | || ||| |||||| || | |||||| ||| Sbjct 7172 GCCTACACAATCAGCTTCATATTTCTCTTTCTCAACTTCTACATTCAGACATACAAT 7116 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 601843239036240