Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13]
177,401 sequences; 1,960,317,893 total letters
Query= NC_028461.1
Length=127011
Score E
Sequences producing significant alignments: (Bits) Value
seq18562 269 2e-67
seq145711 143 2e-29
seq95250 87.8 1e-12
>seq18562
Length=18598
Score = 269 bits (298), Expect = 2e-67
Identities = 484/698 (69%), Gaps = 18/698 (3%)
Strand=Plus/Minus
Query 29840 GGAAAGGGTCTGGGCTCCCTCTCGAGCTG-AGTCTTCAGCGGTTCCACGTTATCCAGGTA 29898
||||||| ||| || || | || ||||| ||| |||||||| || | || ||||||
Sbjct 12877 GGAAAGG-TCTTGGTTCTCACTGAAGCTGCAGT-TTCAGCGGCTCAGTATGATTCAGGTA 12820
Query 29899 GACGTGAGCGTCTCCCAGGTTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGC 29958
||||| || ||||||| |||| ||||| || || || | ||| || ||| ||| ||
Sbjct 12819 AACGTGTGCATCTCCCAAAGTGTGTACAAAGTCACCTGGCTTTAGGCCCATGATGTGTGC 12760
Query 29959 CATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTC 30018
||||||| ||||| || |||||||||| |||||| |||||| | || || ||||||||
Sbjct 12759 GATCATGTGGGTGAGCAGGGAGTAGCTGGAGATGTTGAAGGGTGCGCCCAGGCCCATGTC 12700
Query 30019 CCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGT------CG--CTCACGTAAAAC 30070
| ||||||||||| ||||| || || ||||| || | || |||||| |||
Sbjct 12699 TGCTGACCTCTGGTATAGCTGGCAGGACAGCTCCCCATTCATCACGTAGACACGTAGAAC 12640
Query 30071 TGACACATGGCGTGGCACGGAGGAAGAGCCATG--AGGCCCAAG-TCTTTGGGGTTCCAG 30127
|| || | ||| ||||| ||||| || |||||| ||| ||| ||||| || |||||
Sbjct 12639 TGGCAAAGGGCATGGCATGGAGGTAGGGCCATGAAAGG---AAGATCTTTTGGATTCCAA 12583
Query 30128 GCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTGC 30187
|| |||| ||||| | ||||| || ||| | |||| | ||| | | ||||||
Sbjct 12582 GCACACAGAATGATTCTTCTGTCAGTAGGTTTGGTTTTGATCATGTCAATCACCTTTTGC 12523
Query 30188 AGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAA 30247
|| || |||| || || || || |||| ||| | |||| ||||| || |||
Sbjct 12522 AGTTGGCCCACTCCTTGACCTGAATAATCTGAATCCATATTTTTGTATTCTGCCCCAAAA 12463
Query 30248 TGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCC 30307
||||||||||| || || || || || || | || ||||||| ||| ||| ||
Sbjct 12462 TGCCTCCACTGAAAGCC-TAAACTGGGCCTAAATCCCCCTCTTTTCTGCTAGAGAATCCA 12404
Query 30308 CTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCAGAG 30367
|||| ||||| | || || ||||| |||||||| || || ||| | ||
Sbjct 12403 AGGCCATCCAGGAAGTCACGAGACCCATTGGCATCCCAGATTTTCACTCCCCTGGTTGAC 12344
Query 30368 AGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTC 30427
|| ||||| | |||||||| || ||| ||||||||||||||||||| | |||||
Sbjct 12343 AGTTCTTTAGCATTTGTGGATCCGTTGATAAACCACAGCAGCTCCTCCAAAATCCCCTTC 12284
Query 30428 CAAAAGACCCTCTTGGTCGTGAGGAGGGGAAACTGTCCCTTGAGGCCGTACCTGGCCTGA 30487
|| || || | ||||| || || || ||||| | | | |||| ||| || ||| |
Sbjct 12283 CAGAACACACATTTGGTTGTCAGCAGAGGAAATTCATCTCTCAGGCTGTAGCTCGCCCGC 12224
Query 30488 GAACCAAACACGGACAAGACTCCCGTGCCCGTCCTGTC 30525
| ||||| |||| | || ||||| || | |||
Sbjct 12223 ACGCTGAACACCGACAGGGTGCCGGTGCCTGTGCGGTC 12186
>seq145711
Length=17273
Score = 143 bits (158), Expect = 2e-29
Identities = 130/164 (79%), Gaps = 0/164 (0%)
Strand=Plus/Plus
Query 29941 TAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGG 30000
||| || |||| ||| || |||||||| ||||| || ||||||||||||||||| |||||
Sbjct 11194 TAGGCCCGTGATGTGTGCGATCATGTAGGTGAGCAGGGAGTAGCTGGCGATGTTGAAGGG 11253
Query 30001 TACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCT 30060
|| || || |||||||| | ||||||||||| ||||| || || ||||| || |
Sbjct 11254 CACGCCCAGGCCCATGTCTGCTGACCTCTGGTATAGCTGGCAGGACAGCTCCCCATTCAC 11313
Query 30061 CACGTAAAACTGACACATGGCGTGGCACGGAGGAAGAGCCATGA 30104
|||||| ||||| || | ||| ||||| ||||| || |||||||
Sbjct 11314 CACGTAGAACTGGCAGAGGGCATGGCAGGGAGGTAGGGCCATGA 11357
>seq95250
Length=14987
Score = 87.8 bits (96), Expect = 1e-12
Identities = 84/108 (78%), Gaps = 0/108 (0%)
Strand=Plus/Plus
Query 110401 TTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCTCAGAGGTCTATTCTTTTCGGGG 110460
|| || || || ||||| |||| || |||||||| | | ||||| |||||| || ||
Sbjct 14027 TTGAGTTCTCTACTGAGAACTAAATTAATCCTGTCCTTTAAAGGTCGATTCTTCTCAGGA 14086
Query 110461 ATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTGCCT 110508
||||||||||| ||||| ||||||| ||||||| ||||| || |||
Sbjct 14087 ATGGAGAACCAGGTCTTCTTACCCATAATCACCAAATTCTGTTTACCT 14134
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 405431926568892
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |