Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13]
177,401 sequences; 1,960,317,893 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq97981 136 3e-27
seq548 127 2e-24
seq161317 118 9e-22
seq79216 109 5e-19
seq8818 96.9 3e-15
seq136388 87.8 2e-12
>seq97981
Length=9611
Score = 136 bits (150), Expect = 3e-27
Identities = 167/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| |||| ||| || ||||| |||||| | || || || || || || ||
Sbjct 2695 ATGCAGATCTTTGCAAAGACCCTGACTGGCAAGACCATCACCCTCGAGGTTGAGCCCAGT 2636
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | |||||||| |||||| ||||| |||||||| || ||||| || | || ||
Sbjct 2635 GACACCATTGAGATTGTCAAAGCTAAAATCCAAGACAAGGAGGGCATCCCTTCTGACCAG 2576
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|||||| | | | || |||||||| ||||||| || || |||| || ||||||
Sbjct 2575 CAGCGTCTGGTTTTTGCAGGCAAACAGCTGGAAGATGATTATACTCTTTCAGACTACAAC 2516
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215
||||| || ||||| ||| | || ||||| | ||| || ||||||||
Sbjct 2515 ATTCAGAAAGAGTCCACCCTGCAGTTGGTGCTTCGTCTGTGGGGTGGC 2468
>seq548
Length=19863
Score = 127 bits (140), Expect = 2e-24
Identities = 166/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| || || ||||| |||||| | || || ||||| || || ||
Sbjct 10756 ATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCCTTGAGGTCGAGCCCAGT 10815
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||||| |||||| ||||| |||||||| || ||||| ||||| || ||
Sbjct 10816 GACACCATTGAGAATGTCAAAGCTAAAATCCAAGACAAGGAGGGCATCCCACCTGACCAG 10875
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | | || | | |||||||| |||| || | | || | || || ||||||
Sbjct 10876 CAGTGACTGATGTTTGTGGGCAAACAGCTGGAGGATGGCTGCACTCTCTCGGACTACAAC 10935
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||||| || ||||| ||| | || ||||| | ||| || ||||| ||||
Sbjct 10936 ATTCAGAAAGAGTCCACCCTGCACTTGGTGCTTCGTCTGTGGGGTAGCAT 10985
>seq161317
Length=2104
Score = 118 bits (130), Expect = 9e-22
Identities = 164/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || || || || || || || || ||| | |||||||| ||||| || | |||
Sbjct 1532 ATGCAAATCTTCGTCAAGACCCTCACTGGAAAGACCATTACTCTGGAAGTCGAGTCATCC 1473
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | ||||| | || || || || || ||||| || || || || |||||||||
Sbjct 1472 GATACCATTGATAATGTGAAGAGCAAGATCCAGGACAAGGAGGGTATTCCTCCCGATCAA 1413
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||||| | || | ||| ||||| ||| | ||||| | || ||||||| ||||||
Sbjct 1412 CAGCGACTCATCTTCGCTGGCAAGCAACTTGAAGATGGCCGAACTCTTTCCGACTACAAC 1353
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||||| ||||| || || | || |||||| | ||| | || ||||| ||
Sbjct 1352 ATTCAGAAGGAATCTACTCTCCACTTGGTTCTCCGTCTTCGTGGTGGTAT 1303
Score = 111 bits (122), Expect = 1e-19
Identities = 163/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
||||||||| || || || || ||||||||||| | || || || || || || | ||
Sbjct 2043 CATGCAGATCTTCGTCAAGACCTTGACCGGCAAGACCATCACCCTCGAGGTTGAGTCTTC 1984
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
|||| | || || | ||||| || ||||| ||||| || ||||| || ||||| ||
Sbjct 1983 CGACACTATCGACAATGTCAAGTCCAAGATTCAGGACAAGGAGGGCATCCCCCCCGACCA 1924
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
|| || || || | ||||||||| || | || ||| | || | || ||||||||
Sbjct 1923 GCAACGCTTGATTTTCGCCGGCAAGCAGCTTGAGGACGGCCGCACTCTCTCTGATTACAA 1864
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|||||| |||||||| || | || | ||| | || | || ||||| ||
Sbjct 1863 CATTCAGAAGGAGTCCACTCTTCACCTTGTTCTCCGCCTCCGTGGTGGTAT 1813
Score = 107 bits (118), Expect = 2e-18
Identities = 163/231 (71%), Gaps = 6/231 (3%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| || ||||| ||||| ||| | || || ||||| || || ||||
Sbjct 1304 ATGCAGATTTTTGTGAAGACTCTCACCGGAAAGACCATCACCCTTGAGGTCGA---GTCC 1248
Query 27048 ---GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGAT 27104
||| | || || | || || || ||||| ||||| || || || || || |||
Sbjct 1247 AGTGACACTATCGACAACGTGAAGAGCAAGATTCAGGACAAGGAGGGTATTCCCCCTGAT 1188
Query 27105 CAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTAC 27164
||||||||| | || | ||| || || || |||||||| || ||| | ||| |||
Sbjct 1187 CAACAGCGTCTTATCTTCGCTGGTAAGCAGTTGGAAGATGGTCGCACCTTAAGCGACTAC 1128
Query 27165 AACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215
|||||||| |||||||| || | || | ||| | || | || ||||||
Sbjct 1127 AACATTCAGAAGGAGTCAACTCTTCACCTCGTTCTCCGACTTCGCGGTGGC 1077
Score = 93.3 bits (102), Expect = 4e-14
Identities = 155/224 (69%), Gaps = 0/224 (0%)
Strand=Plus/Minus
Query 26994 ATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCG 27053
||| | || || || || || |||||| | || |||||||| || || ||||||| |
Sbjct 1754 ATAGTCGTCAAGACCCTCACTGGCAAGACCATCACTCTTGAGGTCGAGTCGTCCGATACC 1695
Query 27054 ATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGT 27113
|| || | || || ||| ||||| ||||| || ||||| || || || || |||||
Sbjct 1694 ATCGACAATGTTAAGTCAAAGATTCAGGACAAGGAGGGCATCCCTCCTGACCAGCAGCGC 1635
Query 27114 TTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAA 27173
| || | || || || ||| | ||||| | ||| || |||| |||||||||||
Sbjct 1634 CTGATCTTTGCTGGAAAGCAACTCGAAGATGGCCGAACCCTTGCCGACTACAACATTCAG 1575
Query 27174 AAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||||| || ||| | ||| | || | || | || ||||| ||
Sbjct 1574 AAGGAATCTACCCTTCATCTCGTCCTCCGCCTCCGTGGTGGTAT 1531
>seq79216
Length=33065
Score = 109 bits (120), Expect = 5e-19
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || || |||||||||||| | || || || || ||||| ||| |
Sbjct 3633 ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCGAGC 3574
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||||| || || || || || || ||||||||||| || ||||| ||
Sbjct 3573 GACACCATTGAGAATGTGAAGGCCAAGATCCAGGATAAAGAAGGCATCCCCCCCGACCAG 3514
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | | || | || ||||| || |||| || | || |||| || ||||||
Sbjct 3513 CAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAGGATGGCCGCACTCTTTCTGACTACAAC 3454
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215
|| || || ||||| ||| | || |||| |||| || | ||||||
Sbjct 3453 ATCCAGAAAGAGTCCACCCTGCACCTGGTCCTGCGCCTGAGAGGTGGC 3406
>seq8818
Length=48227
Score = 96.9 bits (106), Expect = 3e-15
Identities = 162/234 (69%), Gaps = 4/234 (2%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| || || ||||| ||||| | || || ||||| || || ||
Sbjct 8931 ATGCAGATCTTTGTGAAGACCCTGACTAGCAAGACCATCACCCTTGAGGTTGAGCCCAGT 8872
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | | ||||| |||||| ||||| |||||||| || ||||| || || || ||
Sbjct 8871 GACACCACTGAGAATGTCAAAGCTAAAATCCAAGACAAGGAGGGCATCCCGCCTGACCAG 8812
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||||| | || | || ||||||| |||| || | || | || || ||||||
Sbjct 8811 CAGCGACTGATTTTTGCGGGCAAACGGCTGGAGGATGGCCGCACTCTCTCGGACTACAAC 8752
Query 27168 ATTCAAAAGGAG----TCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||||| || ||| || || | || ||||| | ||| |||| |||||||
Sbjct 8751 ATTCAGAAAGAGTCCCTCCACGCTGCACTTGGTGCTTCGTCTGCGTAGTGGCAT 8698
>seq136388
Length=18143
Score = 87.8 bits (96), Expect = 2e-12
Identities = 157/228 (69%), Gaps = 1/228 (0%)
Strand=Plus/Minus
Query 26990 GCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGA 27049
|||||| | ||| | | | ||||| |||||| | || || ||||| | || || ||
Sbjct 7766 GCAGATCTCTGTGAGACC-CTGACTGGCAAGACCATCACCCTTGAGGCTGAGCCCAGTGA 7708
Query 27050 CTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACA 27109
| | | ||||| |||||| ||||| |||||||| || ||||| || | | || ||
Sbjct 7707 CACCACTGAGAATGTCAAAGCTAAAATACAAGACAAGGAGGGCATCCCGCATGCCCAGCA 7648
Query 27110 GCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACAT 27169
|| | | || | || |||||||| |||| || | | || | || | ||||||||
Sbjct 7647 GCATCTGATTTTTGCAGGCAAACAGCTGGAGGATGGCTGCACTCTCTCAAACTACAACAT 7588
Query 27170 TCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||| || ||||| ||| ||| ||||| | | | | ||||||||||
Sbjct 7587 TCAGAAAGAGTCCACCCTACGGTTGGTGCTTCATCTATGGGGTGGCAT 7540
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433981267017593
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |