Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_028657.1 Length=60919 Score E Sequences producing significant alignments: (Bits) Value seq177183 161 4e-35 >seq177183 Length=17048 Score = 161 bits (178), Expect = 4e-35 Identities = 237/328 (72%), Gaps = 18/328 (5%) Strand=Plus/Minus Query 7285 AACAAAGTCATTCTGGTTGGTAACGTCGGTGGTGACCCGGAAACCCGCTACATGCCCAAC 7344 || |||||||| ||||| || || |||| |||||||| |||| | | | Sbjct 12490 AATAAAGTCATCCTGGTCGGCAATCTCGGCAACGACCCGGACGTGAAGTACACCCAGAGC 12431 Query 7345 GGCAATGCGGTGACCAACATCACCCTCGCCACCAGCGAGAG-CTGGAAGGACAAGCAGAC 7403 |||| ||| | ||| ||||| ||| ||||||| | || | | | ||||||||| | Sbjct 12430 GGCATGGCGATCACCCGCATCAGCCTGGCCACCACC-AGCGTCCGCAAGGACAAGGAT-- 12374 Query 7404 CGGCCAGCAACAGGAACGCGCCGAGTTCCACCGCGTGGTGTTCTTCGGTCGCCTGGCGGA 7463 ||| | || ||||||||| |||| | |||||||||||||||||||| || | || Sbjct 12373 -GGCAACCAGCAGGAACGCACCGAATGGCACCGCGTGGTGTTCTTCGGCAAGCTCGGTGA 12315 Query 7464 GATCGCCGGCGAGTACCTGCGCAAGGGTTCCCAGGTCTACGTCGAAGGCAGCCTGCGCAC 7523 ||||||||||||||||||||||||||| | |||||||||||||||||||||||| Sbjct 12314 GATCGCCGGCGAGTACCTGCGCAAGGGCAGCTCGGTCTACGTCGAAGGCAGCCTGCGTTA 12255 Query 7524 CCGCAAGT-GGCAGGCTCAGGACGGCCAGGACCGATACACCACCGAGGTAATCGTCGAC- 7581 | ||||| | ||| ||||||||| ||| ||| ||||||| ||||||| | Sbjct 12254 CGACAAGTACACCGGC-CAGGACGGCGTGGAGAAGTACTCCACCGA---TATCGTCGCCG 12199 Query 7582 ATGCACGGACAGATGCAGATGCTTGGCG 7609 ||| ||||||||||||| |||| Sbjct 12198 ATG-------AGATGCAGATGCTGGGCG 12178 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 194408786689322