Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_028785.1 Length=72790 Score E Sequences producing significant alignments: (Bits) Value seq164418 304 6e-78 >seq164418 Length=2565 Score = 304 bits (336), Expect = 6e-78 Identities = 556/801 (69%), Gaps = 39/801 (5%) Strand=Plus/Plus Query 64082 CTGGACGGCGCTCTGGGCATCGGGGGGTACCCGAGGGGCCGGGTGGTGGAAATCTACGGC 64141 || ||| ||| ||||||||||||| |||| |||||| |||||||||||||| || Sbjct 663 CTCGACATCGCATTGGGCATCGGGGGTCTGCCGAAGGGCCGCGTGGTGGAAATCTATGGA 722 Query 64142 CCAGAATCTTCAGGGAAGTCAACTCTGTGTCTCCACGCGGTGGCCAA-TGCGCAGAAGGC 64200 || || || || || ||| | || ||| || || || | ||| | ||| |||||| Sbjct 723 CCGGAGTCCTCGGGCAAGACCACGCTGACGCTGCAGGCCATCGCCGAGTGC-CAGAAGAT 781 Query 64201 CGGTGGCAACGCCGCCTACATCGACGCTGAGCACTCCCTGGACCCTGAGTA---CGCCAA 64257 || |||| ||| |||| |||||| || |||||| | || ||||| || |||||| Sbjct 782 GGGAGGCACCGCTGCCTTCATCGATGCCGAGCACGCTCTCGACCCGATCTATGCCGCCAA 841 Query 64258 GGCGCTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAGCCGGACACTGGCGAGCAGGC 64317 | || || ||| || | ||| | || || || ||||| || || || || ||||| Sbjct 842 G---CTTGGCGTGAACGTGGACGATCTGCTGCTGTCGCAGCCCGATACCGGTGAACAGGC 898 Query 64318 CCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGCTGTCCATCGTCGTCGTTGACTC 64377 |||| |||| ||| | || ||| || ||| | || |||| | || | ||||| Sbjct 899 ATTGGAAATCGCCGACATGCTGGTCCGTTCCGGCTCGGTGGACATCCTGGTGATCGACTC 958 Query 64378 TGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATCGGGGAC-AGTCACGTCG 64436 || ||||| || ||| ||||| |||| ||||| || || ||| ||| | | Sbjct 959 GGTCGCGGCATTGACCCCGAAGGCCGAAATCGAGGGCGAGATGGGCGACCAGTTGCCG-G 1017 Query 64437 GCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCTCACCGGCACCATCTCCAGCA 64496 | ||||| || ||||| ||| ||||| |||| ||||| ||||||| |||| || Sbjct 1018 GTCTGCAGGCCCGCCTGATGAGCCAGGCGCTGCGTAAGCTGACCGGCAACATCAAGCGCT 1077 Query 64497 CCAACACGCTGACGCTCTGGGTCAACCAGTTGCGCGAGAAGATCGGCAACGTG------G 64550 | ||||||||| | ||| |||||||| ||||| |||||||||| || | Sbjct 1078 CGAACACGCTGGTGATCTTCATCAACCAGCTGCGCATGAAGATCGGCGTGATGATGCCGG 1137 Query 64551 GCTACGGCCCGAACGAGACCACCACGGGCGGCAAGGCTTTGAGGTTCTACGCCTCAGTCC 64610 || | ||||| |||||||||||||| ||||| || ||| |||||| ||||| |||| Sbjct 1138 GCCAGAGCCCG---GAGACCACCACGGGTGGCAACGCGCTGAAGTTCTATGCCTCGGTCC 1194 Query 64611 GCATGGATGTCCGTCGCATC---GCCACCGAGAAGGAAGGCGATGAGGCTGTCGGCAACC 64667 | |||| |||| |||||| |||| | ||||| ||||||||| |||| |||| Sbjct 1195 GTCTGGACATCCGCCGCATCGGTGCCATCAAGAAG---GGCGATGAGATCATCGGTAACC 1251 Query 64668 GCACCCGGGTGAAGGTCGTCAAGAACAAGCTGGCCCCGCCGCACCGCAACGCCGAGT--T 64725 ||| | | |||||||||||||||||||||||||||||| | | || | || | Sbjct 1252 AGACCAAGATCAAGGTCGTCAAGAACAAGCTGGCCCCGCCGTTC----AAGCAG-GTAAT 1306 Query 64726 CTCCG---TCGTGTACGGGGAGGGCATCTCGCGTGAGGTCGAACTCCTCGACCTGGCCGT 64782 | ||| || |||| || || |||||| ||||| | ||||| ||||| ||| ||| Sbjct 1307 CACCGAGATCCTGTATGGCGAAGGCATCAGCCGTGAAGGTGAACTGATCGACATGGGCGT 1366 Query 64783 G--TCGCAGGGCCTGGTGAAGAAGTCGGGCGCCTGGTTCAAGTACGGGGACAAGAACGTC 64840 | | || | ||||| ||||| | || ||||||| || || || || || | || Sbjct 1367 GGATGCCAAG--CTGGTCGAGAAGGCCGGTGCCTGGTACAGCTATGGCGAAGAGCGCATC 1424 Query 64841 GCCCAGGGCAAGCCCAAGGCC 64861 | |||||||||| ||| ||| Sbjct 1425 GGCCAGGGCAAGGACAACGCC 1445 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 232299862094111