Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13]
177,401 sequences; 1,960,317,893 total letters
Query= NC_028809.1
Length=58637
Score E
Sequences producing significant alignments: (Bits) Value
seq174594 1150 0.0
seq171395 181 4e-41
>seq174594
Length=7134
Score = 1150 bits (1274), Expect = 0.0
Identities = 1319/1757 (75%), Gaps = 46/1757 (3%)
Strand=Plus/Minus
Query 56253 GGCACCACTACTGGTTCACCAAGCCGGCCGACGTGTCCCTGCTCGACACGCTCGAGGCCT 56312
||||||||||||||||||||||||| ||||||||| |||||||||| || |||| ||
Sbjct 7061 GGCACCACTACTGGTTCACCAAGCCCGCCGACGTGCAGCTGCTCGACAGCCTGGAGGACT 7002
Query 56313 ACGCGGGCGTGGAGTTCAAGTCGCTCGGCCGCCAGGTCGTCGCGGCCGGCTCGGTCCACC 56372
|| | ||||||||||||||| | |||||||||||||||||| || ||||| || ||||
Sbjct 7001 ACCCCGGCGTGGAGTTCAAGAGCCACGGCCGCCAGGTCGTCGCCGCGGGCTCCGTGCACC 6942
Query 56373 CGAACGGCAGGCACTACGAGTGGGACGACCTTGCGCCGCCGCTGTCCGAGATGCNNNNNN 56432
|| ||| | | ||||||||||||||||| |||| ||| ||| |
Sbjct 6941 CGTGCGGGCGCCGGTACGAGTGGGACGACCTGTCGCCCGACCTGGACGACGCTCCGGAGC 6882
Query 56433 NNNCGGCCGTCCTCCTGCGCCTCTGCCGCCGGCCCACCCGCGCGCACGGCGAGGCAGCGG 56492
| ||| || |||||||| ||||| ||| || || ||||||||||| || |
Sbjct 6881 TGCCCGCCACACTGCTGCGCCTGACGCGCCGCCCCGTGCGGGCCCACGGCGAGGCGGCAG 6822
Query 56493 GCCTTGGTGAGCTCACCCCCGAGATGCTCGCCGCGACGCTCGAGCAGCTGGACGCCGAG- 56551
| || || |||||||||||||||||||| ||||| |||| ||||| |||||| ||| |
Sbjct 6821 GACTGGGCGAGCTCACCCCCGAGATGCTGGCCGCTTCGCTGGAGCACCTGGAC-CCGTGC 6763
Query 56552 GACTTCCAGGACCACGACACG---TGGCGCGACCTGATGATGGCCTGCCACCACGCCACC 56608
|||||||||||||||||| || |||| ||||||||||||||||||||||||||
Sbjct 6762 GACTTCCAGGACCACGACTCGCAGTGGCTGCCGCTGATGATGGCCTGCCACCACGCCACG 6703
Query 56609 AACGGCGAAGGCCGGCAGGAGTTCATCGAGTGGTCCACTCAGGACCCCAAGTACCAGGAC 56668
|||||||| || ||||||||||||||||| |||||||| |||||||| ||| ||||
Sbjct 6702 AACGGCGAGGGGCGGCAGGAGTTCATCGACTGGTCCACGCAGGACCCGCGCTACTCGGAC 6643
Query 56669 GACGCGTGGATCATCGGCCGCCGCTGGGACTCGCTCCATGCGA---CGTC---GGGCCGC 56722
||||| |||| ||||||||||| |||||||| || || || | || | ||| ||
Sbjct 6642 GACGCCTGGACGATCGGCCGCCGGTGGGACTCTCTGCACGCCAGCCCGACCGGGGGACGG 6583
Query 56723 GGAGGCCGCCCCGTCACCGTCAAGTTCCTGCACAAGGTCGTGCAGGAGGCGGGCGGCGAG 56782
| ||||||||||| ||||| |||||||||||||||||||||||||| ||||||||| ||
Sbjct 6582 CGGGGCCGCCCCGTGACCGTGAAGTTCCTGCACAAGGTCGTGCAGGACGCGGGCGGCCAG 6523
Query 56783 GTCGCGCGCCCTGACCCCGAGGACGACTTCGACGTCTGGGAGGACCCCTCCGAGCACGGC 56842
||||||||||| || | |||||||||||||||| |||||||| || || | ||
Sbjct 6522 GTCGCGCGCCCCGAGGCGGAGGACGACTTCGACGCGTGGGAGGAACCGGAGGACCTGGGG 6463
Query 56843 CAGGGCGTGGACGACGCGGTCCTCAGGGCCGAGCCGAAGGCGGAGGGCGTGCAGGCCGTC 56902
| |||||||||||||||| || | | ||||| ||| |||||| | ||||||
Sbjct 6462 CGCGGCGTGGACGACGCGGCGCTGCGCGAGCCGCCGAGGGCCGAGGGCATCGCCGCCGTC 6403
Query 56903 ATGGAGGAGATGAACGAGCAGCACTGCGTGGTGATGGAGGGCGGCAAGTTCCGCATCTTC 56962
|| ||||||||||||| | ||||| ||| | | |||| ||| ||||| || ||
Sbjct 6402 ATCGAGGAGATGAACGCCCGGCACTACGTCGCGCTGGACAACGG---GTTCCAGGTCGTC 6346
Query 56963 ACCGAGGAGATGGACCCGGTCCTG---GGCCGCCCGTTCTTCCAGCGCAGCACCAAGGAG 57019
|||||| || ||||||| || | |||||| | || |||||||| | |||
Sbjct 6345 ACCGAGCAGCCGGACCCGATCTTCAACGGCCGCGTGCGCTACCAGCGCATGTCGAAGAGC 6286
Query 57020 GACTTCGAGAACCTC-TACTGCAACCAGCTCGTCGAGGTGCACGACAAGCTCGTGACGCG 57078
|||||| | |||| ||| ||||||||||||||| |||||||||| ||| |
Sbjct 6285 GACTTCC-GCTCCTCCTACGAGAACCAGCTCGTCGAGCACAACGACAAGCTGATGAGCAG 6227
Query 57079 CTCCT-CCTACTGGATCAGGAACCCGCACCGCCGGCAGTACAAGGGCGTCATCTTCGACC 57137
|| |||| ||| |||||| |||||||||||| ||||||||| ||||||||||||
Sbjct 6226 GGCCGACCTA-TGGCTCAGGAGCCCGCACCGCCGCACCTACAAGGGCATCATCTTCGACC 6168
Query 57138 CCGAGCGCAACCA------CGAGGGCTGGCTCAACCTGTGGCGCGGCTGGGCCGTGCAGC 57191
| | |||| | || |||||||||||||||| ||||| |||||| |||| |||
Sbjct 6167 CGGCGCGCGAGCAGGAGCACGAGGGCTGGCTCAACATGTGGAAGGGCTGGTCCGTCGAGC 6108
Query 57192 CGAACAAGGGCGACTGGTCCCTGCTCAAGGAGCTCATCCGCGAGGTGCTCGTCGACGGCG 57251
||| |||||||||||| ||||| ||||||||||| || |||||| ||||||||
Sbjct 6107 CGAGGCCGGGCGACTGGTCGCTGCTGCGCGAGCTCATCCGTGACGTGCTCACCGACGGCG 6048
Query 57252 TGGACGCCCACTACGAGTACGTGCTCGACTGGCTCGCCTACATGGTGCAGCACCC-GAGC 57310
| |||| | |||||||||||| ||||| | |||| |||| | |||||||| |||
Sbjct 6047 ATGCCGCCTCGTTCGAGTACGTGCTGAACTGGATGGCCTTCATGTTCCAGCACCCCGAGA 5988
Query 57311 CGCGCGGCCGAGGTGGCCCTGTGCTTCAAGGGCGAGAAGGGGACGGGCAAGGGCACCCTG 57370
| || | ||||| || | ||||| ||||| |||||| ||||||||| |||| ||
Sbjct 5987 GGGTCG-CGGAGGTCGCGATCGCCTTCAGGGGCGCGAAGGGCACGGGCAAGAGCACGCTC 5929
Query 57371 GGCCGCGCCGCCGCGTCGCTCGCCGGCTCCCACGGCCTGCACATCAGCTCGCCGGAGCAC 57430
||||| || ||| |||||| || | ||||||||||||| | ||| |||
Sbjct 5928 GGCCGGGCGCTCGCCAAGCTCGCGGGGGCGAGCGGCCTGCACATCGCCAACCCGTCGCAG 5869
Query 57431 CTGGTCGGCCGCTTCAACTCGCACCTGCAGAACTGCATCTGTCTGTTCGCCGACGAGGCC 57490
|| || || | |||||||| ||||| |||||||||||| |||||||| ||||||||
Sbjct 5868 CTCGTGGGGAGGTTCAACTCCCACCTCCAGAACTGCATCCTGCTGTTCGCGGACGAGGCG 5809
Query 57491 TTCTGGGCCGGCGACAAGGCGGGTGAGGCGAAGCTCAAGCAGTTGGTGACCGAGCCGACG 57550
||||||||||||||||||||||| ||| || ||| ||| | | ||||| |||||||||
Sbjct 5808 TTCTGGGCCGGCGACAAGGCGGGCGAGTCGGTGCTGAAGGCGCTCGTGACGGAGCCGACG 5749
Query 57551 ATCGCGTACGAGGGCAAGGGCCGCGACGCCGTCATGGGCAAGAACCACGTGCACATCATC 57610
| |||||||||||||||||||||||||| ||||||| |||||||||||||||| ||
Sbjct 5748 CTGATCTACGAGGGCAAGGGCCGCGACGCCGTGATGGGCAGGAACCACGTGCACATCGTC 5689
Query 57611 ATGGCGGCGAACGGCGACTGGGTCGTCCCGGCCGGCCTCGACGGCGAGCGCCGCTTCGCC 57670
||||| | ||| |||||||||||| ||||||||| | |||||||||||||| |||||
Sbjct 5688 ATGGCATCCAACAACGACTGGGTCGTGCCGGCCGGCATGGACGGCGAGCGCCGGTTCGCG 5629
Query 57671 GTGTTCCAGGTCAACAGCCGCCGGCGCGGGGACAAGGCCTTCTTCAAGGCCCTGAACCAC 57730
|||||| | |||||| || |||||||| |||||||| |||||| | || || |||| |
Sbjct 5628 GTGTTCAACGTCAACGAGCGGCGGCGCGGCGACAAGGCGTTCTTCGACGCGCTCAACCTC 5569
Query 57731 CAGCTCTATGCCGAGGGTGGCATCGAGGGCATGCTGCACGACCTGCTGCTGCGTGACATC 57790
|||||| | || ||| ||| ||| |||| | |||||||| ||||| || ||| |
Sbjct 5568 CAGCTCAA---CGGGGGCGGCCTCGCGGGCCTATTGCACGACATGCTGACCCGCGACCTG 5512
Query 57791 GAGGGCTGGGCCCCGCGCGACGAG-GTGCCGGCGACCAAGGCGCTCGTCGAGCAGAAGGT 57849
| | |||| ||||||||| ||| |||||| |||| |||| || | ||||||||| |
Sbjct 5511 GGCGACTGGCACCCGCGCGA-GAGCGTGCCGCAGACCGAGGCCCTGGCGGAGCAGAAGCT 5453
Query 57850 CATGACCATGGACGACGTCGAGCGCTGGTGGTACAACAAGCTCCTCGA--CGGGATG-CT 57906
||||| | | || || ||| ||||||| || | ||||| || |||| | ||
Sbjct 5452 CATGAGCCAGAGCGCCGAGGAGTCCTGGTGGGACGGC---CTCCTGGAGGCGGGGCGCCT 5396
Query 57907 GCCGAACGCGCGGGGCGAC------TGGCACGAGGGCGCTGTCGTGGTCATCAAGGAGCA 57960
||| ||| | ||||||| ||| || || || |||| ||| |||||| |
Sbjct 5395 GCCCAACTTCCTGGGCGACCTGCCTTGGGACTCGGAGGCCGTCGAGGTGGACAAGGACGA 5336
Query 57961 CCTGCGGGCGGACTACG 57977
|| | || |||||||
Sbjct 5335 GCTCCACGCCGACTACG 5319
>seq171395
Length=4653
Score = 181 bits (200), Expect = 4e-41
Identities = 206/271 (76%), Gaps = 4/271 (1%)
Strand=Plus/Plus
Query 56018 CGCGGCAAGACCCCGAGGGACGGCGCGTGGCAGGCCCGCGAATATGACTCGCAGGGCGTG 56077
|| || ||| | ||| | |||||||| |||||| | | || || ||||| | | ||||
Sbjct 4385 CGGGGGAAGTCGCCGCGCGACGGCGCCTGGCAGTCGAGGGACTACGACTCCCGCGCCGTG 4444
Query 56078 CTGCAGATAGCGGAGCGCGAGGGCGTCAACGTCGGCGTGCGCCTGCCGGCCTCCGT-GAT 56136
| ||| ||||||||| |||||||||||||||||| | ||| || | |
Sbjct 4445 GTCGCCCGCGCGACCCGCGAGGGCTCGAACGTCGGCGTGCGCCTGTC-GCCGGGGTGGCT 4503
Query 56137 GGTGCTCGACGTCGACCCCCGCAACTTCCCCGAGGGCCGCGACTCCCTGGCCGAGCTCGT 56196
||||||||||| ||||||||| |||||||||||||||||||| | ||||||||||| ||
Sbjct 4504 CGTGCTCGACGTGGACCCCCGCTACTTCCCCGAGGGCCGCGACCCGCTGGCCGAGCTGGT 4563
Query 56197 -CGCTGATGCTGGGCTGGACCTGAGCCTTGCCCCCCATACGGTGACCGGCTCCGGCGGGC 56255
||| || || || | ||||| | || || || || ||||| || || |||||||
Sbjct 4564 GCGC-GACGCGCGGATCGACCTCGCGCAGGCACCGCACACCGTGACGGGGTCGGGCGGGC 4622
Query 56256 ACCACTACTGGTTCACCAAGCCGGCCGACGT 56286
|||||||||||||||||||||| ||||||||
Sbjct 4623 ACCACTACTGGTTCACCAAGCCCGCCGACGT 4653
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 187121770194438
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |