Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_028809.1 Length=58637 Score E Sequences producing significant alignments: (Bits) Value seq174594 1150 0.0 seq171395 181 4e-41 >seq174594 Length=7134 Score = 1150 bits (1274), Expect = 0.0 Identities = 1319/1757 (75%), Gaps = 46/1757 (3%) Strand=Plus/Minus Query 56253 GGCACCACTACTGGTTCACCAAGCCGGCCGACGTGTCCCTGCTCGACACGCTCGAGGCCT 56312 ||||||||||||||||||||||||| ||||||||| |||||||||| || |||| || Sbjct 7061 GGCACCACTACTGGTTCACCAAGCCCGCCGACGTGCAGCTGCTCGACAGCCTGGAGGACT 7002 Query 56313 ACGCGGGCGTGGAGTTCAAGTCGCTCGGCCGCCAGGTCGTCGCGGCCGGCTCGGTCCACC 56372 || | ||||||||||||||| | |||||||||||||||||| || ||||| || |||| Sbjct 7001 ACCCCGGCGTGGAGTTCAAGAGCCACGGCCGCCAGGTCGTCGCCGCGGGCTCCGTGCACC 6942 Query 56373 CGAACGGCAGGCACTACGAGTGGGACGACCTTGCGCCGCCGCTGTCCGAGATGCNNNNNN 56432 || ||| | | ||||||||||||||||| |||| ||| ||| | Sbjct 6941 CGTGCGGGCGCCGGTACGAGTGGGACGACCTGTCGCCCGACCTGGACGACGCTCCGGAGC 6882 Query 56433 NNNCGGCCGTCCTCCTGCGCCTCTGCCGCCGGCCCACCCGCGCGCACGGCGAGGCAGCGG 56492 | ||| || |||||||| ||||| ||| || || ||||||||||| || | Sbjct 6881 TGCCCGCCACACTGCTGCGCCTGACGCGCCGCCCCGTGCGGGCCCACGGCGAGGCGGCAG 6822 Query 56493 GCCTTGGTGAGCTCACCCCCGAGATGCTCGCCGCGACGCTCGAGCAGCTGGACGCCGAG- 56551 | || || |||||||||||||||||||| ||||| |||| ||||| |||||| ||| | Sbjct 6821 GACTGGGCGAGCTCACCCCCGAGATGCTGGCCGCTTCGCTGGAGCACCTGGAC-CCGTGC 6763 Query 56552 GACTTCCAGGACCACGACACG---TGGCGCGACCTGATGATGGCCTGCCACCACGCCACC 56608 |||||||||||||||||| || |||| |||||||||||||||||||||||||| Sbjct 6762 GACTTCCAGGACCACGACTCGCAGTGGCTGCCGCTGATGATGGCCTGCCACCACGCCACG 6703 Query 56609 AACGGCGAAGGCCGGCAGGAGTTCATCGAGTGGTCCACTCAGGACCCCAAGTACCAGGAC 56668 |||||||| || ||||||||||||||||| |||||||| |||||||| ||| |||| Sbjct 6702 AACGGCGAGGGGCGGCAGGAGTTCATCGACTGGTCCACGCAGGACCCGCGCTACTCGGAC 6643 Query 56669 GACGCGTGGATCATCGGCCGCCGCTGGGACTCGCTCCATGCGA---CGTC---GGGCCGC 56722 ||||| |||| ||||||||||| |||||||| || || || | || | ||| || Sbjct 6642 GACGCCTGGACGATCGGCCGCCGGTGGGACTCTCTGCACGCCAGCCCGACCGGGGGACGG 6583 Query 56723 GGAGGCCGCCCCGTCACCGTCAAGTTCCTGCACAAGGTCGTGCAGGAGGCGGGCGGCGAG 56782 | ||||||||||| ||||| |||||||||||||||||||||||||| ||||||||| || Sbjct 6582 CGGGGCCGCCCCGTGACCGTGAAGTTCCTGCACAAGGTCGTGCAGGACGCGGGCGGCCAG 6523 Query 56783 GTCGCGCGCCCTGACCCCGAGGACGACTTCGACGTCTGGGAGGACCCCTCCGAGCACGGC 56842 ||||||||||| || | |||||||||||||||| |||||||| || || | || Sbjct 6522 GTCGCGCGCCCCGAGGCGGAGGACGACTTCGACGCGTGGGAGGAACCGGAGGACCTGGGG 6463 Query 56843 CAGGGCGTGGACGACGCGGTCCTCAGGGCCGAGCCGAAGGCGGAGGGCGTGCAGGCCGTC 56902 | |||||||||||||||| || | | ||||| ||| |||||| | |||||| Sbjct 6462 CGCGGCGTGGACGACGCGGCGCTGCGCGAGCCGCCGAGGGCCGAGGGCATCGCCGCCGTC 6403 Query 56903 ATGGAGGAGATGAACGAGCAGCACTGCGTGGTGATGGAGGGCGGCAAGTTCCGCATCTTC 56962 || ||||||||||||| | ||||| ||| | | |||| ||| ||||| || || Sbjct 6402 ATCGAGGAGATGAACGCCCGGCACTACGTCGCGCTGGACAACGG---GTTCCAGGTCGTC 6346 Query 56963 ACCGAGGAGATGGACCCGGTCCTG---GGCCGCCCGTTCTTCCAGCGCAGCACCAAGGAG 57019 |||||| || ||||||| || | |||||| | || |||||||| | ||| Sbjct 6345 ACCGAGCAGCCGGACCCGATCTTCAACGGCCGCGTGCGCTACCAGCGCATGTCGAAGAGC 6286 Query 57020 GACTTCGAGAACCTC-TACTGCAACCAGCTCGTCGAGGTGCACGACAAGCTCGTGACGCG 57078 |||||| | |||| ||| ||||||||||||||| |||||||||| ||| | Sbjct 6285 GACTTCC-GCTCCTCCTACGAGAACCAGCTCGTCGAGCACAACGACAAGCTGATGAGCAG 6227 Query 57079 CTCCT-CCTACTGGATCAGGAACCCGCACCGCCGGCAGTACAAGGGCGTCATCTTCGACC 57137 || |||| ||| |||||| |||||||||||| ||||||||| |||||||||||| Sbjct 6226 GGCCGACCTA-TGGCTCAGGAGCCCGCACCGCCGCACCTACAAGGGCATCATCTTCGACC 6168 Query 57138 CCGAGCGCAACCA------CGAGGGCTGGCTCAACCTGTGGCGCGGCTGGGCCGTGCAGC 57191 | | |||| | || |||||||||||||||| ||||| |||||| |||| ||| Sbjct 6167 CGGCGCGCGAGCAGGAGCACGAGGGCTGGCTCAACATGTGGAAGGGCTGGTCCGTCGAGC 6108 Query 57192 CGAACAAGGGCGACTGGTCCCTGCTCAAGGAGCTCATCCGCGAGGTGCTCGTCGACGGCG 57251 ||| |||||||||||| ||||| ||||||||||| || |||||| |||||||| Sbjct 6107 CGAGGCCGGGCGACTGGTCGCTGCTGCGCGAGCTCATCCGTGACGTGCTCACCGACGGCG 6048 Query 57252 TGGACGCCCACTACGAGTACGTGCTCGACTGGCTCGCCTACATGGTGCAGCACCC-GAGC 57310 | |||| | |||||||||||| ||||| | |||| |||| | |||||||| ||| Sbjct 6047 ATGCCGCCTCGTTCGAGTACGTGCTGAACTGGATGGCCTTCATGTTCCAGCACCCCGAGA 5988 Query 57311 CGCGCGGCCGAGGTGGCCCTGTGCTTCAAGGGCGAGAAGGGGACGGGCAAGGGCACCCTG 57370 | || | ||||| || | ||||| ||||| |||||| ||||||||| |||| || Sbjct 5987 GGGTCG-CGGAGGTCGCGATCGCCTTCAGGGGCGCGAAGGGCACGGGCAAGAGCACGCTC 5929 Query 57371 GGCCGCGCCGCCGCGTCGCTCGCCGGCTCCCACGGCCTGCACATCAGCTCGCCGGAGCAC 57430 ||||| || ||| |||||| || | ||||||||||||| | ||| ||| Sbjct 5928 GGCCGGGCGCTCGCCAAGCTCGCGGGGGCGAGCGGCCTGCACATCGCCAACCCGTCGCAG 5869 Query 57431 CTGGTCGGCCGCTTCAACTCGCACCTGCAGAACTGCATCTGTCTGTTCGCCGACGAGGCC 57490 || || || | |||||||| ||||| |||||||||||| |||||||| |||||||| Sbjct 5868 CTCGTGGGGAGGTTCAACTCCCACCTCCAGAACTGCATCCTGCTGTTCGCGGACGAGGCG 5809 Query 57491 TTCTGGGCCGGCGACAAGGCGGGTGAGGCGAAGCTCAAGCAGTTGGTGACCGAGCCGACG 57550 ||||||||||||||||||||||| ||| || ||| ||| | | ||||| ||||||||| Sbjct 5808 TTCTGGGCCGGCGACAAGGCGGGCGAGTCGGTGCTGAAGGCGCTCGTGACGGAGCCGACG 5749 Query 57551 ATCGCGTACGAGGGCAAGGGCCGCGACGCCGTCATGGGCAAGAACCACGTGCACATCATC 57610 | |||||||||||||||||||||||||| ||||||| |||||||||||||||| || Sbjct 5748 CTGATCTACGAGGGCAAGGGCCGCGACGCCGTGATGGGCAGGAACCACGTGCACATCGTC 5689 Query 57611 ATGGCGGCGAACGGCGACTGGGTCGTCCCGGCCGGCCTCGACGGCGAGCGCCGCTTCGCC 57670 ||||| | ||| |||||||||||| ||||||||| | |||||||||||||| ||||| Sbjct 5688 ATGGCATCCAACAACGACTGGGTCGTGCCGGCCGGCATGGACGGCGAGCGCCGGTTCGCG 5629 Query 57671 GTGTTCCAGGTCAACAGCCGCCGGCGCGGGGACAAGGCCTTCTTCAAGGCCCTGAACCAC 57730 |||||| | |||||| || |||||||| |||||||| |||||| | || || |||| | Sbjct 5628 GTGTTCAACGTCAACGAGCGGCGGCGCGGCGACAAGGCGTTCTTCGACGCGCTCAACCTC 5569 Query 57731 CAGCTCTATGCCGAGGGTGGCATCGAGGGCATGCTGCACGACCTGCTGCTGCGTGACATC 57790 |||||| | || ||| ||| ||| |||| | |||||||| ||||| || ||| | Sbjct 5568 CAGCTCAA---CGGGGGCGGCCTCGCGGGCCTATTGCACGACATGCTGACCCGCGACCTG 5512 Query 57791 GAGGGCTGGGCCCCGCGCGACGAG-GTGCCGGCGACCAAGGCGCTCGTCGAGCAGAAGGT 57849 | | |||| ||||||||| ||| |||||| |||| |||| || | ||||||||| | Sbjct 5511 GGCGACTGGCACCCGCGCGA-GAGCGTGCCGCAGACCGAGGCCCTGGCGGAGCAGAAGCT 5453 Query 57850 CATGACCATGGACGACGTCGAGCGCTGGTGGTACAACAAGCTCCTCGA--CGGGATG-CT 57906 ||||| | | || || ||| ||||||| || | ||||| || |||| | || Sbjct 5452 CATGAGCCAGAGCGCCGAGGAGTCCTGGTGGGACGGC---CTCCTGGAGGCGGGGCGCCT 5396 Query 57907 GCCGAACGCGCGGGGCGAC------TGGCACGAGGGCGCTGTCGTGGTCATCAAGGAGCA 57960 ||| ||| | ||||||| ||| || || || |||| ||| |||||| | Sbjct 5395 GCCCAACTTCCTGGGCGACCTGCCTTGGGACTCGGAGGCCGTCGAGGTGGACAAGGACGA 5336 Query 57961 CCTGCGGGCGGACTACG 57977 || | || ||||||| Sbjct 5335 GCTCCACGCCGACTACG 5319 >seq171395 Length=4653 Score = 181 bits (200), Expect = 4e-41 Identities = 206/271 (76%), Gaps = 4/271 (1%) Strand=Plus/Plus Query 56018 CGCGGCAAGACCCCGAGGGACGGCGCGTGGCAGGCCCGCGAATATGACTCGCAGGGCGTG 56077 || || ||| | ||| | |||||||| |||||| | | || || ||||| | | |||| Sbjct 4385 CGGGGGAAGTCGCCGCGCGACGGCGCCTGGCAGTCGAGGGACTACGACTCCCGCGCCGTG 4444 Query 56078 CTGCAGATAGCGGAGCGCGAGGGCGTCAACGTCGGCGTGCGCCTGCCGGCCTCCGT-GAT 56136 | ||| ||||||||| |||||||||||||||||| | ||| || | | Sbjct 4445 GTCGCCCGCGCGACCCGCGAGGGCTCGAACGTCGGCGTGCGCCTGTC-GCCGGGGTGGCT 4503 Query 56137 GGTGCTCGACGTCGACCCCCGCAACTTCCCCGAGGGCCGCGACTCCCTGGCCGAGCTCGT 56196 ||||||||||| ||||||||| |||||||||||||||||||| | ||||||||||| || Sbjct 4504 CGTGCTCGACGTGGACCCCCGCTACTTCCCCGAGGGCCGCGACCCGCTGGCCGAGCTGGT 4563 Query 56197 -CGCTGATGCTGGGCTGGACCTGAGCCTTGCCCCCCATACGGTGACCGGCTCCGGCGGGC 56255 ||| || || || | ||||| | || || || || ||||| || || ||||||| Sbjct 4564 GCGC-GACGCGCGGATCGACCTCGCGCAGGCACCGCACACCGTGACGGGGTCGGGCGGGC 4622 Query 56256 ACCACTACTGGTTCACCAAGCCGGCCGACGT 56286 |||||||||||||||||||||| |||||||| Sbjct 4623 ACCACTACTGGTTCACCAAGCCCGCCGACGT 4653 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 187121770194438